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Cow genome map

           
Conread name:
           
Ova1-OVRM10096D07
        

               
Conread position:
               
2-162
               

               
Cow position:
               
chr13:17771763-17771922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
96-381
               

               
Cow position:
               
chr13:15061780-15061476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
112-515
               

               
Cow position:
               
chr13:18696566-18696982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
123-408
               

               
Cow position:
               
chr13:33601488-33601200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
134, 43
               

               
Conread position:
               
129-328
               

               
Cow position:
               
chr13:37405455-37405660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
132-318
               

               
Cow position:
               
chr13:25313406-25313210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
135-314
               

               
Cow position:
               
chr13:1363211-1363390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
135-338
               

               
Cow position:
               
chr13:52249299-52249086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
140-328
               

               
Cow position:
               
chr13:5175356-5175546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
141-515
               

               
Cow position:
               
chr13:20360031-20360410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
17, 221
               

               
Conread position:
               
142-515
               

               
Cow position:
               
chr13:25537397-25537772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
178, 7
               

               
Conread position:
               
143-515
               

               
Cow position:
               
chr13:54582632-54583017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 174
               

               
Conread position:
               
145-328
               

               
Cow position:
               
chr13:8240439-8240612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
145-513
               

               
Cow position:
               
chr13:8362985-8362612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
145-515
               

               
Cow position:
               
chr13:9587823-9587447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
147-328
               

               
Cow position:
               
chr13:4965164-4965339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
147-328
               

               
Cow position:
               
chr13:6951343-6951528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
147-328
               

               
Cow position:
               
chr13:57929796-57929621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
179, 16
               

               
Conread position:
               
147-514
               

               
Cow position:
               
chr13:28139344-28139705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
67, 135
               

               
Conread position:
               
148-325
               

               
Cow position:
               
chr13:5660003-5659821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
148-394
               

               
Cow position:
               
chr13:17089749-17089502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
148-504
               

               
Cow position:
               
chr13:20466505-20466155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
149-324
               

               
Cow position:
               
chr13:17994608-17994428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
150-302
               

               
Cow position:
               
chr13:9612841-9612992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
150-324
               

               
Cow position:
               
chr13:19222440-19222618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
150-391
               

               
Cow position:
               
chr13:55765412-55765163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
150-418
               

               
Cow position:
               
chr13:40541346-40541066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 211
               

               
Conread position:
               
150-488
               

               
Cow position:
               
chr13:47322625-47322291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
150-499
               

               
Cow position:
               
chr13:9142038-9142415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 6
               

               
Conread position:
               
150-505
               

               
Cow position:
               
chr13:5263510-5263159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
150-514
               

               
Cow position:
               
chr13:21235899-21235548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
151-278
               

               
Cow position:
               
chr13:15529478-15529350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
151-318
               

               
Cow position:
               
chr13:42613857-42614023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
151-328
               

               
Cow position:
               
chr13:55713658-55713487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
151-464
               

               
Cow position:
               
chr13:28291087-28291414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 131
               

               
Conread position:
               
151-466
               

               
Cow position:
               
chr13:52477877-52477555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
151-477
               

               
Cow position:
               
chr13:54128829-54128492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
151-515
               

               
Cow position:
               
chr13:18058480-18058109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
152-373
               

               
Cow position:
               
chr13:10210890-10210662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
153-328
               

               
Cow position:
               
chr13:23685234-23685050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
153-328
               

               
Cow position:
               
chr13:37030119-37030291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
153-515
               

               
Cow position:
               
chr13:6079634-6079279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 86
               

               
Conread position:
               
153-515
               

               
Cow position:
               
chr13:37069111-37069489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
153-515
               

               
Cow position:
               
chr13:45352794-45353186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
154-266
               

               
Cow position:
               
chr13:52929201-52929312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
154-309
               

               
Cow position:
               
chr13:41474642-41474802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
154-328
               

               
Cow position:
               
chr13:3149663-3149482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
154-328
               

               
Cow position:
               
chr13:24107776-24107599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
154-328
               

               
Cow position:
               
chr13:53619771-53619953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
90, 6
               

               
Conread position:
               
154-335
               

               
Cow position:
               
chr13:45499002-45499188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
154-336
               

               
Cow position:
               
chr13:21246943-21246753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 177
               

               
Conread position:
               
154-373
               

               
Cow position:
               
chr13:52536341-52536562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
171, 76
               

               
Conread position:
               
154-376
               

               
Cow position:
               
chr13:28536552-28536322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
21, 189
               

               
Conread position:
               
154-427
               

               
Cow position:
               
chr13:52641180-52640900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 6
               

               
Conread position:
               
154-491
               

               
Cow position:
               
chr13:6189828-6189500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 6
               

               
Conread position:
               
154-496
               

               
Cow position:
               
chr13:20261562-20261204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
154-505
               

               
Cow position:
               
chr13:46111737-46112100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
154-514
               

               
Cow position:
               
chr13:3160172-3160530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
95, 173
               

               
Conread position:
               
154-515
               

               
Cow position:
               
chr13:19188083-19188441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
154-515
               

               
Cow position:
               
chr13:32017747-32017386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
21, 134
               

               
Conread position:
               
155-328
               

               
Cow position:
               
chr13:48373545-48373369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr13:37555100-37554894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
155-515
               

               
Cow position:
               
chr13:17745029-17745379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 98
               

               
Conread position:
               
155-515
               

               
Cow position:
               
chr13:57494400-57494043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
156-309
               

               
Cow position:
               
chr13:8312471-8312327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
156-320
               

               
Cow position:
               
chr13:53847350-53847180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
156-324
               

               
Cow position:
               
chr13:53357599-53357778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
156-326
               

               
Cow position:
               
chr13:17975190-17975016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chr13:28081488-28081670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
156-332
               

               
Cow position:
               
chr13:21024754-21024940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
156-398
               

               
Cow position:
               
chr13:15083433-15083682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
90, 116
               

               
Conread position:
               
156-439
               

               
Cow position:
               
chr13:17823181-17822889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 130
               

               
Conread position:
               
156-445
               

               
Cow position:
               
chr13:25504308-25504601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
156-492
               

               
Cow position:
               
chr13:1231415-1231764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
156-509
               

               
Cow position:
               
chr13:18999301-18999676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 129
               

               
Conread position:
               
156-509
               

               
Cow position:
               
chr13:44322664-44323034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 233
               

               
Conread position:
               
156-515
               

               
Cow position:
               
chr13:15041703-15041332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
90, 221
               

               
Conread position:
               
156-515
               

               
Cow position:
               
chr13:37775435-37775087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
19, 123
               

               
Conread position:
               
156-517
               

               
Cow position:
               
chr13:21269811-21269438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 216
               

               
Conread position:
               
157-313
               

               
Cow position:
               
chr13:6012946-6012792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
157-331
               

               
Cow position:
               
chr13:10040781-10040606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
157-331
               

               
Cow position:
               
chr13:62260294-62260462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
157-365
               

               
Cow position:
               
chr13:24094544-24094328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
157-515
               

               
Cow position:
               
chr13:49023093-49022734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 228
               

               
Conread position:
               
159-505
               

               
Cow position:
               
chr13:14063746-14063393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 304
               

               
Conread position:
               
160-309
               

               
Cow position:
               
chr13:15114245-15114401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
160-349
               

               
Cow position:
               
chr13:57322925-57323116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 169
               

               
Conread position:
               
160-509
               

               
Cow position:
               
chr13:28552359-28552730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 115
               

               
Conread position:
               
160-515
               

               
Cow position:
               
chr13:9800295-9800643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
163-335
               

               
Cow position:
               
chr13:54128052-54127872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
84, 124
               

               
Conread position:
               
163-346
               

               
Cow position:
               
chr13:55775142-55775330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
163-361
               

               
Cow position:
               
chr13:58421869-58422054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
183, 86
               

               
Conread position:
               
163-417
               

               
Cow position:
               
chr13:28440754-28440496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
164-515
               

               
Cow position:
               
chr13:5671806-5671452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 216
               

               
Conread position:
               
166-427
               

               
Cow position:
               
chr13:35557329-35557055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
170-494
               

               
Cow position:
               
chr13:19278881-19279209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 46
               

               
Conread position:
               
171-308
               

               
Cow position:
               
chr13:27726990-27727122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
171-328
               

               
Cow position:
               
chr13:10757927-10758076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
171-328
               

               
Cow position:
               
chr13:16476640-16476806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
171-328
               

               
Cow position:
               
chr13:24796670-24796827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
171-356
               

               
Cow position:
               
chr13:31507655-31507464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
171-378
               

               
Cow position:
               
chr13:42849343-42849131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
171-401
               

               
Cow position:
               
chr13:11565626-11565858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
80, 196
               

               
Conread position:
               
171-427
               

               
Cow position:
               
chr13:21171785-21171522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 240
               

               
Conread position:
               
171-432
               

               
Cow position:
               
chr13:17350130-17350408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 156
               

               
Conread position:
               
171-434
               

               
Cow position:
               
chr13:18197821-18197550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 196
               

               
Conread position:
               
171-512
               

               
Cow position:
               
chr13:20509514-20509869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 214
               

               
Conread position:
               
171-513
               

               
Cow position:
               
chr13:52057346-52057682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
171-514
               

               
Cow position:
               
chr13:20864196-20863877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
245, 13
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr13:24369372-24369720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 28
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr13:34729054-34728697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr13:45023436-45023072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 242
               

               
Conread position:
               
172-274
               

               
Cow position:
               
chr13:40794550-40794447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
172-292
               

               
Cow position:
               
chr13:30809587-30809460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-293
               

               
Cow position:
               
chr13:43577775-43577905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-295
               

               
Cow position:
               
chr13:48165951-48165830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
172-300
               

               
Cow position:
               
chr13:19182882-19182749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
172-305
               

               
Cow position:
               
chr13:62304357-62304497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
172-307
               

               
Cow position:
               
chr13:25561418-25561548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
172-310
               

               
Cow position:
               
chr13:20042476-20042329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-310
               

               
Cow position:
               
chr13:38484330-38484467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 80
               

               
Conread position:
               
172-313
               

               
Cow position:
               
chr13:2529164-2529016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
172-313
               

               
Cow position:
               
chr13:8367506-8367652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
172-313
               

               
Cow position:
               
chr13:25061971-25062111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
130, 25
               

               
Conread position:
               
172-313
               

               
Cow position:
               
chr13:26960010-26959864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
172-313
               

               
Cow position:
               
chr13:29805225-29805083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-314
               

               
Cow position:
               
chr13:51106912-51107054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
172-317
               

               
Cow position:
               
chr13:5873646-5873493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
172-318
               

               
Cow position:
               
chr13:56019209-56019055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
172-319
               

               
Cow position:
               
chr13:23795592-23795447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
5, 70
               

               
Conread position:
               
172-320
               

               
Cow position:
               
chr13:47651628-47651475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
172-321
               

               
Cow position:
               
chr13:14782136-14782284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
172-324
               

               
Cow position:
               
chr13:9108885-9108730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
5, 103
               

               
Conread position:
               
172-324
               

               
Cow position:
               
chr13:28587958-28587797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 111
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr13:10055204-10055367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr13:25679115-25679266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr13:30148767-30148617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
172-327
               

               
Cow position:
               
chr13:27198702-27198856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
172-327
               

               
Cow position:
               
chr13:41550016-41549856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
72, 148
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:3153535-3153699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:8393094-8392948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
154, 47
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:9327304-9327138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:11146841-11147006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:11410496-11410663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:11942387-11942230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:15060441-15060589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:16163376-16163531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:17624105-17624271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:20520098-20520264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:22115463-22115627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 44
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:23823242-23823085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
78, 115
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:25521136-25520966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:28376774-28376611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:28605607-28605442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:41155267-41155118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:47538362-47538211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr13:50623023-50622863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
172-329
               

               
Cow position:
               
chr13:714676-714509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
172-329
               

               
Cow position:
               
chr13:21955282-21955115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-329
               

               
Cow position:
               
chr13:43342355-43342518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 107
               

               
Conread position:
               
172-329
               

               
Cow position:
               
chr13:48126892-48127058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-330
               

               
Cow position:
               
chr13:34533141-34532982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
172-331
               

               
Cow position:
               
chr13:1339357-1339189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-331
               

               
Cow position:
               
chr13:8637482-8637650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
172-331
               

               
Cow position:
               
chr13:10279710-10279879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
172-331
               

               
Cow position:
               
chr13:29802415-29802567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
172-331
               

               
Cow position:
               
chr13:34300060-34299907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
172-331
               

               
Cow position:
               
chr13:43576798-43576966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-335
               

               
Cow position:
               
chr13:56432033-56431870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 151
               

               
Conread position:
               
172-336
               

               
Cow position:
               
chr13:8699955-8699781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
68, 167
               

               
Conread position:
               
172-336
               

               
Cow position:
               
chr13:21426031-21425870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
78, 107
               

               
Conread position:
               
172-337
               

               
Cow position:
               
chr13:52891038-52891190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
172-340
               

               
Cow position:
               
chr13:23478688-23478862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
70, 158
               

               
Conread position:
               
172-343
               

               
Cow position:
               
chr13:55007982-55007807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
172-347
               

               
Cow position:
               
chr13:22345487-22345306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
172-353
               

               
Cow position:
               
chr13:26422825-26423028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
172-356
               

               
Cow position:
               
chr13:52913664-52913853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
172-358
               

               
Cow position:
               
chr13:21277669-21277485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
172-358
               

               
Cow position:
               
chr13:22601898-22601713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
167, 77
               

               
Conread position:
               
172-360
               

               
Cow position:
               
chr13:21188170-21188352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
151, 53
               

               
Conread position:
               
172-363
               

               
Cow position:
               
chr13:13283126-13283334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
172-365
               

               
Cow position:
               
chr13:28439204-28439398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 42
               

               
Conread position:
               
172-367
               

               
Cow position:
               
chr13:6980713-6980910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 92
               

               
Conread position:
               
172-367
               

               
Cow position:
               
chr13:53850608-53850815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-368
               

               
Cow position:
               
chr13:7104446-7104646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
172-371
               

               
Cow position:
               
chr13:17813259-17813466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
172-373
               

               
Cow position:
               
chr13:10522727-10522931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
76, 175
               

               
Conread position:
               
172-377
               

               
Cow position:
               
chr13:8450121-8450331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
172-379
               

               
Cow position:
               
chr13:30315288-30315510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
172-380
               

               
Cow position:
               
chr13:21902191-21902396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
172-385
               

               
Cow position:
               
chr13:47243764-47243546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
172-387
               

               
Cow position:
               
chr13:9707959-9707738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
36, 128
               

               
Conread position:
               
172-387
               

               
Cow position:
               
chr13:37614410-37614180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 222
               

               
Conread position:
               
172-388
               

               
Cow position:
               
chr13:28071664-28071885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
5, 29
               

               
Conread position:
               
172-389
               

               
Cow position:
               
chr13:15993171-15993399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
69, 138
               

               
Conread position:
               
172-389
               

               
Cow position:
               
chr13:48378733-48378521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
209, 31
               

               
Conread position:
               
172-391
               

               
Cow position:
               
chr13:14644841-14645066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
172-391
               

               
Cow position:
               
chr13:47676149-47675920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-391
               

               
Cow position:
               
chr13:59461034-59461253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
172-392
               

               
Cow position:
               
chr13:1462504-1462281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
172-395
               

               
Cow position:
               
chr13:50646841-50646617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
76, 159
               

               
Conread position:
               
172-400
               

               
Cow position:
               
chr13:8232806-8233022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
172-402
               

               
Cow position:
               
chr13:14927041-14927285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
26, 137
               

               
Conread position:
               
172-402
               

               
Cow position:
               
chr13:21981182-21980949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
75, 117
               

               
Conread position:
               
172-404
               

               
Cow position:
               
chr13:45439320-45439550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 137
               

               
Conread position:
               
172-407
               

               
Cow position:
               
chr13:3209535-3209291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
172-407
               

               
Cow position:
               
chr13:44003487-44003729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
172-412
               

               
Cow position:
               
chr13:34873372-34873625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 229
               

               
Conread position:
               
172-417
               

               
Cow position:
               
chr13:7149711-7149474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
151, 34
               

               
Conread position:
               
172-429
               

               
Cow position:
               
chr13:16020647-16020904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
153, 69
               

               
Conread position:
               
172-432
               

               
Cow position:
               
chr13:11103420-11103136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-432
               

               
Cow position:
               
chr13:19007731-19007987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 26
               

               
Conread position:
               
172-432
               

               
Cow position:
               
chr13:20314837-20314564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
172-433
               

               
Cow position:
               
chr13:45108613-45108356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
151, 67
               

               
Conread position:
               
172-434
               

               
Cow position:
               
chr13:21170316-21170586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 234
               

               
Conread position:
               
172-434
               

               
Cow position:
               
chr13:62007895-62008169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
172-436
               

               
Cow position:
               
chr13:11231509-11231249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
47, 169
               

               
Conread position:
               
172-436
               

               
Cow position:
               
chr13:19427422-19427699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
172-437
               

               
Cow position:
               
chr13:14411679-14411946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
73, 150
               

               
Conread position:
               
172-448
               

               
Cow position:
               
chr13:39939778-39939494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
172-455
               

               
Cow position:
               
chr13:7149025-7149308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
172-465
               

               
Cow position:
               
chr13:45073458-45073167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 30
               

               
Conread position:
               
172-468
               

               
Cow position:
               
chr13:25978406-25978098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 133
               

               
Conread position:
               
172-468
               

               
Cow position:
               
chr13:56035069-56034766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
77, 171
               

               
Conread position:
               
172-477
               

               
Cow position:
               
chr13:620461-620159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
12, 134
               

               
Conread position:
               
172-477
               

               
Cow position:
               
chr13:13533874-13533568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
72, 113
               

               
Conread position:
               
172-477
               

               
Cow position:
               
chr13:16038495-16038192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
79, 115
               

               
Conread position:
               
172-477
               

               
Cow position:
               
chr13:19240227-19240537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
55, 83
               

               
Conread position:
               
172-477
               

               
Cow position:
               
chr13:46515847-46516162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
172-484
               

               
Cow position:
               
chr13:21127553-21127235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
172-492
               

               
Cow position:
               
chr13:1170246-1170586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 115
               

               
Conread position:
               
172-493
               

               
Cow position:
               
chr13:21136124-21135782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 235
               

               
Conread position:
               
172-494
               

               
Cow position:
               
chr13:15194933-15194613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 76
               

               
Conread position:
               
172-496
               

               
Cow position:
               
chr13:30258636-30258967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
30, 230
               

               
Conread position:
               
172-498
               

               
Cow position:
               
chr13:22085944-22085621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 28
               

               
Conread position:
               
172-498
               

               
Cow position:
               
chr13:60375700-60375365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 157
               

               
Conread position:
               
172-499
               

               
Cow position:
               
chr13:39826343-39826677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr13:5758544-5758216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr13:17438074-17437743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
47, 166
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr13:21288297-21287962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 230
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr13:25817317-25817647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 270
               

               
Conread position:
               
172-502
               

               
Cow position:
               
chr13:2192525-2192839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
172-503
               

               
Cow position:
               
chr13:18851876-18852208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
172-503
               

               
Cow position:
               
chr13:34261023-34261362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 233
               

               
Conread position:
               
172-503
               

               
Cow position:
               
chr13:38284183-38283858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
172-503
               

               
Cow position:
               
chr13:42200408-42200746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 229
               

               
Conread position:
               
172-503
               

               
Cow position:
               
chr13:61977170-61976837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 101
               

               
Conread position:
               
172-504
               

               
Cow position:
               
chr13:49204800-49205105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr13:11820948-11821280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr13:16014591-16014945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr13:18166520-18166863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 224
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr13:18491395-18491732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr13:52749675-52749348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr13:52893936-52894277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
75, 44
               

               
Conread position:
               
172-506
               

               
Cow position:
               
chr13:2803274-2803599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
153, 78
               

               
Conread position:
               
172-506
               

               
Cow position:
               
chr13:58763821-58763501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 69
               

               
Conread position:
               
172-507
               

               
Cow position:
               
chr13:15233734-15234046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
158, 52
               

               
Conread position:
               
172-507
               

               
Cow position:
               
chr13:23961019-23960681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
172-507
               

               
Cow position:
               
chr13:24715037-24715376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 75
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr13:9906516-9906867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
65, 246
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr13:12745478-12745805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr13:53573767-53574104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 6
               

               
Conread position:
               
172-512
               

               
Cow position:
               
chr13:6663968-6663614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 185
               

               
Conread position:
               
172-512
               

               
Cow position:
               
chr13:15991443-15991090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 198
               

               
Conread position:
               
172-512
               

               
Cow position:
               
chr13:16247432-16247795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
73, 145
               

               
Conread position:
               
172-512
               

               
Cow position:
               
chr13:20821049-20820699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 229
               

               
Conread position:
               
172-512
               

               
Cow position:
               
chr13:25695979-25695631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 126
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr13:26097970-26098283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 143
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr13:37985960-37985616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 215
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr13:38329406-38329764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr13:57475629-57475278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
66, 153
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr13:866919-867266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr13:6540513-6540173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
158, 65
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr13:12449193-12448853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr13:15193101-15192751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
5, 158
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr13:19883246-19882899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 131
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr13:20088931-20088564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 111
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr13:20497430-20497788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
66, 111
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr13:20893855-20893500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr13:21280713-21280350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 111
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr13:38697845-38698190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr13:41806564-41806914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr13:44278134-44278492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr13:55582982-55583334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 108
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr13:57002510-57002867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 233
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:151758-152094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:311220-311570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 177
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:2773903-2774267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
73, 250
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:4552614-4552943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
300, 15
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:8245526-8245196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
158, 64
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:8374973-8374632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 84
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:9975280-9974932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
119, 69
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:12670664-12670308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 43
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:13088820-13089159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 95
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:13260779-13261144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:13501823-13501483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 77
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:14543923-14544258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:15195413-15195064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
82, 104
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:15445837-15446185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 101
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:17021938-17021589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:17569309-17568959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:19033343-19033692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 197
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:19223439-19223785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
73, 158
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:20174525-20174890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
23, 239
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:20180221-20180557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
146, 64
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:20473887-20473551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:20881133-20880786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 76
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:21242288-21241953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:21275644-21275995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:23512168-23512507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:23667045-23667395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:24753681-24754021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 79
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:25604817-25604486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:26698709-26698357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:32282914-32283264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:34281469-34281816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 148
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:35659542-35659889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 212
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:36876853-36877212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 93
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:37593158-37592798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:37818957-37818609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:40491005-40491369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
77, 54
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:43479850-43480197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:45593711-45594043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 150
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:46525641-46525305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 235
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:49823811-49824163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
75, 164
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:51528650-51528305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:52055805-52055459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:52198893-52199226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:55674422-55674069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 230
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:56686231-56686572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 25
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr13:58524730-58525074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
158, 65
               

               
Conread position:
               
172-516
               

               
Cow position:
               
chr13:17159094-17158734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 226
               

               
Conread position:
               
172-518
               

               
Cow position:
               
chr13:20839368-20839706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
158, 68
               

               
Conread position:
               
172-542
               

               
Cow position:
               
chr13:45074115-45073763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 67
               

               
Conread position:
               
173-308
               

               
Cow position:
               
chr13:24591383-24591526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
173-310
               

               
Cow position:
               
chr13:25924439-25924291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
173-328
               

               
Cow position:
               
chr13:26395248-26395410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
173-328
               

               
Cow position:
               
chr13:37723377-37723529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
173-331
               

               
Cow position:
               
chr13:13780965-13781132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
173-331
               

               
Cow position:
               
chr13:40483191-40483026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
74, 105
               

               
Conread position:
               
173-391
               

               
Cow position:
               
chr13:2776073-2776303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
173-397
               

               
Cow position:
               
chr13:19598876-19598645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
74, 214
               

               
Conread position:
               
173-427
               

               
Cow position:
               
chr13:1147362-1147101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 201
               

               
Conread position:
               
173-444
               

               
Cow position:
               
chr13:20115033-20115319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
75, 233
               

               
Conread position:
               
173-463
               

               
Cow position:
               
chr13:20868957-20868671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 175
               

               
Conread position:
               
173-466
               

               
Cow position:
               
chr13:20137607-20137915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
173-514
               

               
Cow position:
               
chr13:10989285-10988936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
76, 158
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr13:5279420-5279045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr13:15257578-15257242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr13:20784383-20784728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 270
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr13:21106932-21107278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr13:47007924-47007590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
174-278
               

               
Cow position:
               
chr13:25082892-25082998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
174-317
               

               
Cow position:
               
chr13:16106211-16106352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
76, 88
               

               
Conread position:
               
174-324
               

               
Cow position:
               
chr13:20529662-20529522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
174-325
               

               
Cow position:
               
chr13:9551153-9551307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
174-325
               

               
Cow position:
               
chr13:22729616-22729456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
174-325
               

               
Cow position:
               
chr13:29665807-29665966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
74, 157
               

               
Conread position:
               
174-328
               

               
Cow position:
               
chr13:9124718-9124873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
75, 120
               

               
Conread position:
               
174-328
               

               
Cow position:
               
chr13:10423311-10423470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
174-328
               

               
Cow position:
               
chr13:20854670-20854507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 100
               

               
Conread position:
               
174-328
               

               
Cow position:
               
chr13:27871561-27871722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
174-328
               

               
Cow position:
               
chr13:42302252-42302090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 112
               

               
Conread position:
               
174-331
               

               
Cow position:
               
chr13:37946596-37946437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
174-336
               

               
Cow position:
               
chr13:5930521-5930348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
174-338
               

               
Cow position:
               
chr13:57355847-57356004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
154, 74
               

               
Conread position:
               
174-352
               

               
Cow position:
               
chr13:18997187-18997360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
111, 78
               

               
Conread position:
               
174-366
               

               
Cow position:
               
chr13:57770193-57769999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
174-368
               

               
Cow position:
               
chr13:49356259-49356057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
174-372
               

               
Cow position:
               
chr13:14795996-14796201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
174-378
               

               
Cow position:
               
chr13:50768381-50768599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
174-389
               

               
Cow position:
               
chr13:50583028-50582807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
155, 83
               

               
Conread position:
               
174-390
               

               
Cow position:
               
chr13:27180827-27181055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr13:7046670-7046886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr13:15996826-15997050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
174-412
               

               
Cow position:
               
chr13:38035629-38035870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 229
               

               
Conread position:
               
174-422
               

               
Cow position:
               
chr13:585084-584827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
63, 167
               

               
Conread position:
               
174-434
               

               
Cow position:
               
chr13:33962969-33962713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
245, 32
               

               
Conread position:
               
174-468
               

               
Cow position:
               
chr13:17498011-17498310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
174-471
               

               
Cow position:
               
chr13:10220747-10221041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
74, 168
               

               
Conread position:
               
174-471
               

               
Cow position:
               
chr13:10925133-10924817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
76, 117
               

               
Conread position:
               
174-473
               

               
Cow position:
               
chr13:14967425-14967120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 113
               

               
Conread position:
               
174-480
               

               
Cow position:
               
chr13:7265316-7265020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 62
               

               
Conread position:
               
174-498
               

               
Cow position:
               
chr13:5911101-5910773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr13:14576005-14576334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 202
               

               
Conread position:
               
174-505
               

               
Cow position:
               
chr13:51940536-51940866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
174-509
               

               
Cow position:
               
chr13:6848714-6849064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
71, 235
               

               
Conread position:
               
174-512
               

               
Cow position:
               
chr13:20288128-20288466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 228
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr13:7059248-7059611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
74, 184
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr13:12045556-12045198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 244
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr13:12876186-12875832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
73, 129
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr13:15162846-15162518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
63, 168
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr13:15289129-15288789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 157
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr13:17855157-17855510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 185
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr13:20880035-20879691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 205
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr13:27525469-27525125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr13:29831637-29831293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
124, 82
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr13:33256287-33256636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 149
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr13:43139409-43139085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
155, 63
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr13:60509335-60508979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 227
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr13:60966569-60966907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
80, 49
               

               
Conread position:
               
175-291
               

               
Cow position:
               
chr13:17015330-17015209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
175-294
               

               
Cow position:
               
chr13:53138231-53138349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
175-296
               

               
Cow position:
               
chr13:20624766-20624882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
175-298
               

               
Cow position:
               
chr13:46330148-46330017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
175-313
               

               
Cow position:
               
chr13:17815035-17815172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
175-314
               

               
Cow position:
               
chr13:38395945-38396092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
175-317
               

               
Cow position:
               
chr13:7097377-7097524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
175-324
               

               
Cow position:
               
chr13:5092604-5092449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
175-330
               

               
Cow position:
               
chr13:41979346-41979191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 142
               

               
Conread position:
               
175-331
               

               
Cow position:
               
chr13:38683233-38683064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
175-361
               

               
Cow position:
               
chr13:51249586-51249395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
175-362
               

               
Cow position:
               
chr13:33854890-33854698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
175-364
               

               
Cow position:
               
chr13:3594123-3594309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
151, 59
               

               
Conread position:
               
175-364
               

               
Cow position:
               
chr13:49283987-49283792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
175-372
               

               
Cow position:
               
chr13:16908004-16908213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
175-373
               

               
Cow position:
               
chr13:15144040-15143846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
175-378
               

               
Cow position:
               
chr13:18093078-18092874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
146, 202
               

               
Conread position:
               
175-388
               

               
Cow position:
               
chr13:2340767-2340999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
175-388
               

               
Cow position:
               
chr13:20519862-20520073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
154, 67
               

               
Conread position:
               
175-390
               

               
Cow position:
               
chr13:15069763-15069971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
158, 76
               

               
Conread position:
               
175-411
               

               
Cow position:
               
chr13:84382-84615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
175-417
               

               
Cow position:
               
chr13:55494728-55494481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
175-437
               

               
Cow position:
               
chr13:15239721-15239458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 135
               

               
Conread position:
               
175-445
               

               
Cow position:
               
chr13:15756907-15757190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
75, 135
               

               
Conread position:
               
175-445
               

               
Cow position:
               
chr13:42672639-42672352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 84
               

               
Conread position:
               
175-475
               

               
Cow position:
               
chr13:46329812-46329504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
175-477
               

               
Cow position:
               
chr13:15621600-15621916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
75, 130
               

               
Conread position:
               
175-498
               

               
Cow position:
               
chr13:1568725-1569046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 150
               

               
Conread position:
               
175-500
               

               
Cow position:
               
chr13:25435315-25434995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
133, 63
               

               
Conread position:
               
175-500
               

               
Cow position:
               
chr13:26742916-26743251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 101
               

               
Conread position:
               
175-500
               

               
Cow position:
               
chr13:44201800-44202117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
71, 106
               

               
Conread position:
               
175-501
               

               
Cow position:
               
chr13:11201829-11202158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 166
               

               
Conread position:
               
175-503
               

               
Cow position:
               
chr13:59170435-59170786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
68, 230
               

               
Conread position:
               
175-505
               

               
Cow position:
               
chr13:4665059-4664739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
152, 76
               

               
Conread position:
               
175-505
               

               
Cow position:
               
chr13:6973953-6974293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 107
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr13:13320588-13320918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 221
               

               
Conread position:
               
175-513
               

               
Cow position:
               
chr13:19393087-19393427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
175-514
               

               
Cow position:
               
chr13:37803670-37804019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 216
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr13:6616972-6616612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
65, 242
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr13:10845409-10845733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
244, 73
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr13:12989653-12989984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 49
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr13:17292337-17291993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 155
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr13:19022055-19022415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr13:24230001-24230352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr13:24585839-24586181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 134
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr13:25926579-25926932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr13:34995521-34995190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr13:35526403-35526071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr13:48597700-48598050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 182
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr13:49503747-49503392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 233
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr13:54701972-54702327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
175-525
               

               
Cow position:
               
chr13:49795829-49796167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
244, 88
               

               
Conread position:
               
176-308
               

               
Cow position:
               
chr13:3003278-3003404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
176-314
               

               
Cow position:
               
chr13:20789727-20789582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
176-328
               

               
Cow position:
               
chr13:16525436-16525274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 138
               

               
Conread position:
               
176-329
               

               
Cow position:
               
chr13:23399558-23399716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
176-337
               

               
Cow position:
               
chr13:6865872-6865708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 122
               

               
Conread position:
               
176-398
               

               
Cow position:
               
chr13:55080930-55081164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
42, 107
               

               
Conread position:
               
176-428
               

               
Cow position:
               
chr13:52459681-52459431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
176-497
               

               
Cow position:
               
chr13:1958817-1959129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
153, 60
               

               
Conread position:
               
176-510
               

               
Cow position:
               
chr13:14879163-14878817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 111
               

               
Conread position:
               
176-515
               

               
Cow position:
               
chr13:13338650-13339000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
73, 218
               

               
Conread position:
               
176-515
               

               
Cow position:
               
chr13:17114589-17114239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 114
               

               
Conread position:
               
177-307
               

               
Cow position:
               
chr13:58157264-58157129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 97
               

               
Conread position:
               
177-331
               

               
Cow position:
               
chr13:52177395-52177551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 90
               

               
Conread position:
               
177-392
               

               
Cow position:
               
chr13:20090575-20090363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
7, 92
               

               
Conread position:
               
177-402
               

               
Cow position:
               
chr13:33974539-33974757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
153, 74
               

               
Conread position:
               
177-405
               

               
Cow position:
               
chr13:56535260-56535484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
146, 74
               

               
Conread position:
               
177-425
               

               
Cow position:
               
chr13:12673495-12673247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
153, 75
               

               
Conread position:
               
177-434
               

               
Cow position:
               
chr13:6860968-6861239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 183
               

               
Conread position:
               
177-459
               

               
Cow position:
               
chr13:19610771-19610481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
177-468
               

               
Cow position:
               
chr13:50751260-50750961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
5, 60
               

               
Conread position:
               
177-486
               

               
Cow position:
               
chr13:17977135-17977451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 133
               

               
Conread position:
               
177-501
               

               
Cow position:
               
chr13:972104-971767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
177-505
               

               
Cow position:
               
chr13:11260070-11260399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 159
               

               
Conread position:
               
177-505
               

               
Cow position:
               
chr13:17338218-17338568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 201
               

               
Conread position:
               
177-509
               

               
Cow position:
               
chr13:17821465-17821134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 74
               

               
Conread position:
               
177-509
               

               
Cow position:
               
chr13:47186023-47186358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
177-515
               

               
Cow position:
               
chr13:16343503-16343824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
143, 55
               

               
Conread position:
               
178-515
               

               
Cow position:
               
chr13:15974412-15974754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
81, 160
               

               
Conread position:
               
179-278
               

               
Cow position:
               
chr13:24060912-24060810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
180-331
               

               
Cow position:
               
chr13:9492572-9492723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
180-342
               

               
Cow position:
               
chr13:13265360-13265527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
180-509
               

               
Cow position:
               
chr13:6442311-6441966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
66, 53
               

               
Conread position:
               
180-515
               

               
Cow position:
               
chr13:12282633-12282974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
180-519
               

               
Cow position:
               
chr13:48375819-48375501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 77
               

               
Conread position:
               
181-503
               

               
Cow position:
               
chr13:20217601-20217260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
182-312
               

               
Cow position:
               
chr13:28347881-28348016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
182-361
               

               
Cow position:
               
chr13:52027338-52027152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
27, 180
               

               
Conread position:
               
182-367
               

               
Cow position:
               
chr13:4404332-4404522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
182-390
               

               
Cow position:
               
chr13:18340328-18340547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
182-395
               

               
Cow position:
               
chr13:57986134-57985919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 68
               

               
Conread position:
               
182-436
               

               
Cow position:
               
chr13:17611753-17611491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
182-456
               

               
Cow position:
               
chr13:13196039-13196322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 45
               

               
Conread position:
               
182-478
               

               
Cow position:
               
chr13:20534698-20534984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
182-509
               

               
Cow position:
               
chr13:12206859-12207177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
137, 60
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr13:1155907-1155568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr13:15868907-15869261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
56, 178
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr13:26480405-26480073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
183-329
               

               
Cow position:
               
chr13:57446314-57446169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
183-330
               

               
Cow position:
               
chr13:8537617-8537772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 148
               

               
Conread position:
               
183-331
               

               
Cow position:
               
chr13:6976042-6975893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
183-388
               

               
Cow position:
               
chr13:6926311-6926529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
183-389
               

               
Cow position:
               
chr13:56958776-56958981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 120
               

               
Conread position:
               
183-477
               

               
Cow position:
               
chr13:49475870-49476187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 232
               

               
Conread position:
               
183-480
               

               
Cow position:
               
chr13:12974614-12974907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
25, 214
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr13:8667414-8667720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
59, 214
               

               
Conread position:
               
183-505
               

               
Cow position:
               
chr13:18929324-18929661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 159
               

               
Conread position:
               
183-515
               

               
Cow position:
               
chr13:48165624-48165285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
184-339
               

               
Cow position:
               
chr13:10711614-10711452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
184-515
               

               
Cow position:
               
chr13:26261992-26261658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
54, 205
               

               
Conread position:
               
185-327
               

               
Cow position:
               
chr13:55143075-55143221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
185-368
               

               
Cow position:
               
chr13:38012140-38012324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
144, 70
               

               
Conread position:
               
185-391
               

               
Cow position:
               
chr13:6465882-6465675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
185-465
               

               
Cow position:
               
chr13:19779054-19778758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 211
               

               
Conread position:
               
185-502
               

               
Cow position:
               
chr13:18994923-18995256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 146
               

               
Conread position:
               
185-509
               

               
Cow position:
               
chr13:25579394-25579053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
185-514
               

               
Cow position:
               
chr13:11808382-11808697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
186-313
               

               
Cow position:
               
chr13:4135685-4135817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
187-476
               

               
Cow position:
               
chr13:16714463-16714161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
187-482
               

               
Cow position:
               
chr13:20154809-20155107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
187-503
               

               
Cow position:
               
chr13:44626168-44626500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
58, 114
               

               
Conread position:
               
187-514
               

               
Cow position:
               
chr13:54389215-54388882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
190-515
               

               
Cow position:
               
chr13:34263567-34263229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
192-328
               

               
Cow position:
               
chr13:1037445-1037588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
194-439
               

               
Cow position:
               
chr13:13211698-13211948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
194-515
               

               
Cow position:
               
chr13:34035183-34035502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 55
               

               
Conread position:
               
197-356
               

               
Cow position:
               
chr13:9391377-9391540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
197-515
               

               
Cow position:
               
chr13:47964360-47964057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
222, 66
               

               
Conread position:
               
200-515
               

               
Cow position:
               
chr13:21176498-21176182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
202-514
               

               
Cow position:
               
chr13:23651258-23651571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
203-464
               

               
Cow position:
               
chr13:20871212-20871478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
203-508
               

               
Cow position:
               
chr13:20666567-20666256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 284
               

               
Conread position:
               
203-515
               

               
Cow position:
               
chr13:23478847-23479166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 226
               

               
Conread position:
               
207-337
               

               
Cow position:
               
chr13:13286548-13286422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr13:38703055-38702879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
208-429
               

               
Cow position:
               
chr13:16160244-16160469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 217
               

               
Conread position:
               
208-514
               

               
Cow position:
               
chr13:11321785-11321477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
122, 34
               

               
Conread position:
               
208-515
               

               
Cow position:
               
chr13:15110142-15110460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
209-330
               

               
Cow position:
               
chr13:54652493-54652371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 112
               

               
Conread position:
               
209-417
               

               
Cow position:
               
chr13:29662862-29663069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
211-448
               

               
Cow position:
               
chr13:827075-827315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
213-355
               

               
Cow position:
               
chr13:16790042-16790188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
216-466
               

               
Cow position:
               
chr13:3211385-3211642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
218-389
               

               
Cow position:
               
chr13:47193230-47193394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
223-393
               

               
Cow position:
               
chr13:51814089-51813918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
225-515
               

               
Cow position:
               
chr13:11460479-11460761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
227-335
               

               
Cow position:
               
chr13:37979728-37979620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
228-515
               

               
Cow position:
               
chr13:28683212-28683499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
229-477
               

               
Cow position:
               
chr13:47022216-47022461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
230-363
               

               
Cow position:
               
chr13:40634714-40634852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
230-384
               

               
Cow position:
               
chr13:52881014-52880860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
230-470
               

               
Cow position:
               
chr13:23525966-23526204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
230-504
               

               
Cow position:
               
chr13:11591601-11591875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
8, 89
               

               
Conread position:
               
230-515
               

               
Cow position:
               
chr13:2404601-2404879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
230-515
               

               
Cow position:
               
chr13:5082501-5082790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 243
               

               
Conread position:
               
230-515
               

               
Cow position:
               
chr13:26369376-26369666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
232-431
               

               
Cow position:
               
chr13:8478255-8478457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
232-434
               

               
Cow position:
               
chr13:24110332-24110543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
232-515
               

               
Cow position:
               
chr13:52586184-52585884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
91, 286
               

               
Conread position:
               
233-515
               

               
Cow position:
               
chr13:15166671-15166959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 116
               

               
Conread position:
               
234-499
               

               
Cow position:
               
chr13:37381657-37381930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
234-515
               

               
Cow position:
               
chr13:11643791-11644074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
234-515
               

               
Cow position:
               
chr13:40722851-40722569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
236-515
               

               
Cow position:
               
chr13:37484423-37484134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
236-515
               

               
Cow position:
               
chr13:39367817-39368095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
236-515
               

               
Cow position:
               
chr13:53566457-53566735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
237-327
               

               
Cow position:
               
chr13:54681960-54682051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
237-363
               

               
Cow position:
               
chr13:28652598-28652727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
237-372
               

               
Cow position:
               
chr13:6962310-6962448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
237-391
               

               
Cow position:
               
chr13:42640243-42640397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
237-394
               

               
Cow position:
               
chr13:37621502-37621342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
237-396
               

               
Cow position:
               
chr13:49255384-49255215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
237-398
               

               
Cow position:
               
chr13:15460917-15460754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
237-470
               

               
Cow position:
               
chr13:13297536-13297769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
237-475
               

               
Cow position:
               
chr13:50568547-50568317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
86, 66
               

               
Conread position:
               
237-481
               

               
Cow position:
               
chr13:3989061-3989308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
237-482
               

               
Cow position:
               
chr13:19320389-19320642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
237-489
               

               
Cow position:
               
chr13:8355063-8355313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
237-489
               

               
Cow position:
               
chr13:38873087-38872838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
237-500
               

               
Cow position:
               
chr13:45725745-45726021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
237-502
               

               
Cow position:
               
chr13:7076114-7076384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
237-503
               

               
Cow position:
               
chr13:25547727-25547458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 158
               

               
Conread position:
               
237-513
               

               
Cow position:
               
chr13:2413888-2414168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
237-514
               

               
Cow position:
               
chr13:51116166-51115889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 203
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:1043105-1042821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:3315818-3315538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
15, 160
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:9265969-9265692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:11381869-11381582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:12547053-12546770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 160
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:15282077-15281797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
176, 79
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:17439911-17439630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 162
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:17799932-17800212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:17971172-17970888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:18172193-18172478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:20679194-20679490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 167
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:23167242-23166956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:36771564-36771280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 52
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:40943100-40943384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 57
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:46181650-46181929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:51822015-51821752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
110, 91
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr13:55316342-55316049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
237-516
               

               
Cow position:
               
chr13:14771309-14771598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
237-516
               

               
Cow position:
               
chr13:20706346-20706065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
238-406
               

               
Cow position:
               
chr13:43525374-43525205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
238-427
               

               
Cow position:
               
chr13:14749485-14749680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
238-434
               

               
Cow position:
               
chr13:17837809-17838006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
89, 153
               

               
Conread position:
               
238-492
               

               
Cow position:
               
chr13:13765650-13765900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
120, 11
               

               
Conread position:
               
238-503
               

               
Cow position:
               
chr13:23856071-23856340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
238-515
               

               
Cow position:
               
chr13:56148381-56148677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
238-515
               

               
Cow position:
               
chr13:56160586-56160290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
238-515
               

               
Cow position:
               
chr13:60973940-60974223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
238-516
               

               
Cow position:
               
chr13:13465906-13465647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
236, 18
               

               
Conread position:
               
240-448
               

               
Cow position:
               
chr13:9981979-9981768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
83, 100
               

               
Conread position:
               
240-494
               

               
Cow position:
               
chr13:51901446-51901705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
240-504
               

               
Cow position:
               
chr13:56155289-56155030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 9
               

               
Conread position:
               
240-513
               

               
Cow position:
               
chr13:20684267-20683983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 149
               

               
Conread position:
               
240-515
               

               
Cow position:
               
chr13:6087030-6086764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
240-515
               

               
Cow position:
               
chr13:8609687-8609411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
11, 144
               

               
Conread position:
               
240-515
               

               
Cow position:
               
chr13:37640452-37640726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
240-515
               

               
Cow position:
               
chr13:60430217-60429934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
241-514
               

               
Cow position:
               
chr13:42229174-42229454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
241-515
               

               
Cow position:
               
chr13:9593369-9593648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
241-515
               

               
Cow position:
               
chr13:13176512-13176790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 161
               

               
Conread position:
               
242-328
               

               
Cow position:
               
chr13:18701234-18701321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
242-345
               

               
Cow position:
               
chr13:37984264-37984160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
242-515
               

               
Cow position:
               
chr13:547357-547625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
242-515
               

               
Cow position:
               
chr13:21283842-21283570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 161
               

               
Conread position:
               
243-332
               

               
Cow position:
               
chr13:15010073-15010161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
243-357
               

               
Cow position:
               
chr13:12237308-12237426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
243-394
               

               
Cow position:
               
chr13:48465967-48465818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
243-515
               

               
Cow position:
               
chr13:10929123-10928854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 5
               

               
Conread position:
               
243-515
               

               
Cow position:
               
chr13:43762034-43762309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 6
               

               
Conread position:
               
243-517
               

               
Cow position:
               
chr13:62518462-62518191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
243-531
               

               
Cow position:
               
chr13:37528090-37527812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 136
               

               
Conread position:
               
244-489
               

               
Cow position:
               
chr13:8401921-8402169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
245-499
               

               
Cow position:
               
chr13:37981878-37981622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 93
               

               
Conread position:
               
245-503
               

               
Cow position:
               
chr13:15144499-15144244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 34
               

               
Conread position:
               
245-515
               

               
Cow position:
               
chr13:37947085-37946813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 74
               

               
Conread position:
               
248-515
               

               
Cow position:
               
chr13:52284685-52284949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
167, 31
               

               
Conread position:
               
249-468
               

               
Cow position:
               
chr13:55727772-55727993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 132
               

               
Conread position:
               
249-505
               

               
Cow position:
               
chr13:6389266-6389510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
170, 67
               

               
Conread position:
               
249-513
               

               
Cow position:
               
chr13:11060857-11061125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 139
               

               
Conread position:
               
249-515
               

               
Cow position:
               
chr13:48037493-48037761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 151
               

               
Conread position:
               
250-515
               

               
Cow position:
               
chr13:23270334-23270073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
166, 72
               

               
Conread position:
               
251-411
               

               
Cow position:
               
chr13:31529750-31529912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
251-499
               

               
Cow position:
               
chr13:11820471-11820716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
251-509
               

               
Cow position:
               
chr13:54344653-54344906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
168, 28
               

               
Conread position:
               
251-515
               

               
Cow position:
               
chr13:15885148-15884877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
251-515
               

               
Cow position:
               
chr13:31813747-31814011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
251-515
               

               
Cow position:
               
chr13:43194041-43194315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
253-515
               

               
Cow position:
               
chr13:17966335-17966069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
254-515
               

               
Cow position:
               
chr13:47356527-47356770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
254-516
               

               
Cow position:
               
chr13:7663546-7663283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 8
               

               
Conread position:
               
257-378
               

               
Cow position:
               
chr13:3701087-3701205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
257-437
               

               
Cow position:
               
chr13:18181897-18181713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
257-468
               

               
Cow position:
               
chr13:11397570-11397366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
257-489
               

               
Cow position:
               
chr13:56677893-56678129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
70, 57
               

               
Conread position:
               
257-515
               

               
Cow position:
               
chr13:12202240-12202505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 251
               

               
Conread position:
               
257-515
               

               
Cow position:
               
chr13:18835082-18835332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
70, 121
               

               
Conread position:
               
258-359
               

               
Cow position:
               
chr13:16156346-16156242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
259-509
               

               
Cow position:
               
chr13:890293-890038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
9, 144
               

               
Conread position:
               
259-515
               

               
Cow position:
               
chr13:15902904-15903156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 136
               

               
Conread position:
               
260-506
               

               
Cow position:
               
chr13:8524742-8524490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
17, 141
               

               
Conread position:
               
260-515
               

               
Cow position:
               
chr13:6061127-6060870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
260-515
               

               
Cow position:
               
chr13:8652561-8652298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 244
               

               
Conread position:
               
260-515
               

               
Cow position:
               
chr13:15529156-15528892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
263-399
               

               
Cow position:
               
chr13:47634391-47634530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 55
               

               
Conread position:
               
263-417
               

               
Cow position:
               
chr13:60393668-60393822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 128
               

               
Conread position:
               
263-512
               

               
Cow position:
               
chr13:6153900-6153645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
59, 119
               

               
Conread position:
               
263-515
               

               
Cow position:
               
chr13:17622173-17622421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
264-457
               

               
Cow position:
               
chr13:29123189-29123385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
66, 115
               

               
Conread position:
               
266-463
               

               
Cow position:
               
chr13:48862208-48862008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
267-496
               

               
Cow position:
               
chr13:34555940-34555711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 85
               

               
Conread position:
               
271-515
               

               
Cow position:
               
chr13:8201591-8201346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
55, 83
               

               
Conread position:
               
272-515
               

               
Cow position:
               
chr13:20650094-20649839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
275-503
               

               
Cow position:
               
chr13:36353061-36352836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
277-515
               

               
Cow position:
               
chr13:25531892-25531648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
278-504
               

               
Cow position:
               
chr13:18243761-18243992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 113
               

               
Conread position:
               
283-513
               

               
Cow position:
               
chr13:12619212-12618975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 119
               

               
Conread position:
               
283-515
               

               
Cow position:
               
chr13:52929615-52929849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
287-515
               

               
Cow position:
               
chr13:17613248-17613486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
289-515
               

               
Cow position:
               
chr13:25062323-25062546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
293-514
               

               
Cow position:
               
chr13:61166536-61166319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
296-434
               

               
Cow position:
               
chr13:23480522-23480385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
303-509
               

               
Cow position:
               
chr13:17815709-17815902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
307-509
               

               
Cow position:
               
chr13:55295698-55295489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
307-515
               

               
Cow position:
               
chr13:24376421-24376626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
311-515
               

               
Cow position:
               
chr13:52922030-52922232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 86
               

               
Conread position:
               
323-482
               

               
Cow position:
               
chr13:32826511-32826349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
324-513
               

               
Cow position:
               
chr13:10099040-10098853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
112, 51
               

               
Conread position:
               
324-515
               

               
Cow position:
               
chr13:20440633-20440449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
324-515
               

               
Cow position:
               
chr13:30693662-30693846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
93, 73
               

               
Conread position:
               
324-515
               

               
Cow position:
               
chr13:37521428-37521240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
95, 69
               

               
Conread position:
               
325-520
               

               
Cow position:
               
chr13:6455324-6455513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
328-515
               

               
Cow position:
               
chr13:13265759-13265947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
329-515
               

               
Cow position:
               
chr13:28652756-28652939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
341-493
               

               
Cow position:
               
chr13:24060371-24060221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 107
               

               
Conread position:
               
344-515
               

               
Cow position:
               
chr13:12682578-12682405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
351-514
               

               
Cow position:
               
chr13:3701413-3701576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
351-515
               

               
Cow position:
               
chr13:41155059-41154892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
351-515
               

               
Cow position:
               
chr13:47312892-47313059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
355-515
               

               
Cow position:
               
chr13:6975816-6975654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 158
               

               
Conread position:
               
367-504
               

               
Cow position:
               
chr13:19426707-19426567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 119
               

               
Conread position:
               
418-515
               

               
Cow position:
               
chr13:22025666-22025569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.