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Cow genome map

           
Conread name:
           
Ova1-OVRM10096D07
        

               
Conread position:
               
119-515
               

               
Cow position:
               
chr15:21822088-21821681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
120-515
               

               
Cow position:
               
chr15:21942009-21941603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
124-434
               

               
Cow position:
               
chr15:42888993-42888677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 160
               

               
Conread position:
               
130-505
               

               
Cow position:
               
chr15:4789119-4788737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 291
               

               
Conread position:
               
134-515
               

               
Cow position:
               
chr15:36782465-36782084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
137-477
               

               
Cow position:
               
chr15:12785287-12785629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
138-429
               

               
Cow position:
               
chr15:52809708-52809427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
139-503
               

               
Cow position:
               
chr15:10088181-10088551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr15:40000785-40000974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
141-505
               

               
Cow position:
               
chr15:43599050-43599418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 259
               

               
Conread position:
               
142-307
               

               
Cow position:
               
chr15:9128808-9128639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
142-429
               

               
Cow position:
               
chr15:6273024-6272732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
143-515
               

               
Cow position:
               
chr15:41125694-41125327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 29
               

               
Conread position:
               
144-515
               

               
Cow position:
               
chr15:23275398-23275778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
145-329
               

               
Cow position:
               
chr15:21710246-21710054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
145-495
               

               
Cow position:
               
chr15:18017794-18018147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
145-515
               

               
Cow position:
               
chr15:14505307-14505669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
146-433
               

               
Cow position:
               
chr15:25571950-25571648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 215
               

               
Conread position:
               
150-249
               

               
Cow position:
               
chr15:10737911-10737812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-503
               

               
Cow position:
               
chr15:11987543-11987176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 241
               

               
Conread position:
               
150-506
               

               
Cow position:
               
chr15:38837613-38837981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
90, 188
               

               
Conread position:
               
150-515
               

               
Cow position:
               
chr15:19771009-19771375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
151-505
               

               
Cow position:
               
chr15:32226992-32226642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
152-491
               

               
Cow position:
               
chr15:30471106-30470750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 8
               

               
Conread position:
               
152-515
               

               
Cow position:
               
chr15:21907813-21908179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
153-357
               

               
Cow position:
               
chr15:41475955-41475745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
93, 139
               

               
Conread position:
               
153-512
               

               
Cow position:
               
chr15:53716304-53716673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 119
               

               
Conread position:
               
153-514
               

               
Cow position:
               
chr15:20279527-20279154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 272
               

               
Conread position:
               
153-514
               

               
Cow position:
               
chr15:20286126-20285753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 272
               

               
Conread position:
               
153-515
               

               
Cow position:
               
chr15:26896829-26896471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 233
               

               
Conread position:
               
154-308
               

               
Cow position:
               
chr15:47920273-47920117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
154-325
               

               
Cow position:
               
chr15:30956448-30956273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
154-328
               

               
Cow position:
               
chr15:27975999-27975818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
154-331
               

               
Cow position:
               
chr15:7811657-7811473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
154-398
               

               
Cow position:
               
chr15:40834987-40835240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
154-427
               

               
Cow position:
               
chr15:43114846-43114568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 167
               

               
Conread position:
               
154-430
               

               
Cow position:
               
chr15:9888457-9888730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
154-432
               

               
Cow position:
               
chr15:26719025-26718762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 14
               

               
Conread position:
               
154-437
               

               
Cow position:
               
chr15:26522950-26522671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
111, 22
               

               
Conread position:
               
154-505
               

               
Cow position:
               
chr15:45552-45183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
154-513
               

               
Cow position:
               
chr15:18975889-18975524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
154-514
               

               
Cow position:
               
chr15:47990892-47990523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
155-387
               

               
Cow position:
               
chr15:2931697-2931451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
88, 170
               

               
Conread position:
               
155-500
               

               
Cow position:
               
chr15:1857600-1857956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
155-515
               

               
Cow position:
               
chr15:4138007-4138377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 169
               

               
Conread position:
               
155-515
               

               
Cow position:
               
chr15:20081649-20082000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
156-297
               

               
Cow position:
               
chr15:13513408-13513554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
156-309
               

               
Cow position:
               
chr15:22474528-22474682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
156-318
               

               
Cow position:
               
chr15:16657346-16657516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
156-328
               

               
Cow position:
               
chr15:23278377-23278545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
156-345
               

               
Cow position:
               
chr15:20566792-20566985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
156-361
               

               
Cow position:
               
chr15:15992766-15992554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
156-402
               

               
Cow position:
               
chr15:20856607-20856346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
156-428
               

               
Cow position:
               
chr15:15177191-15177469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
156-434
               

               
Cow position:
               
chr15:29686436-29686713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
156-477
               

               
Cow position:
               
chr15:16928213-16927892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
156-512
               

               
Cow position:
               
chr15:44377146-44377516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
157-328
               

               
Cow position:
               
chr15:8331323-8331149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
157-331
               

               
Cow position:
               
chr15:12974210-12974395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 144
               

               
Conread position:
               
157-474
               

               
Cow position:
               
chr15:8665731-8665389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
89, 134
               

               
Conread position:
               
157-477
               

               
Cow position:
               
chr15:52316936-52317263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
157-513
               

               
Cow position:
               
chr15:43827896-43827532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
91, 164
               

               
Conread position:
               
157-514
               

               
Cow position:
               
chr15:31137589-31137222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
88, 120
               

               
Conread position:
               
158-501
               

               
Cow position:
               
chr15:14576207-14576564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
160-328
               

               
Cow position:
               
chr15:17371418-17371593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
160-514
               

               
Cow position:
               
chr15:52482959-52482588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 128
               

               
Conread position:
               
160-515
               

               
Cow position:
               
chr15:16112272-16112645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 255
               

               
Conread position:
               
160-515
               

               
Cow position:
               
chr15:16261209-16261557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 145
               

               
Conread position:
               
163-515
               

               
Cow position:
               
chr15:49922017-49922384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
89, 162
               

               
Conread position:
               
164-321
               

               
Cow position:
               
chr15:53006052-53005893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
164-325
               

               
Cow position:
               
chr15:41049576-41049413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr15:28823927-28823590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
171-314
               

               
Cow position:
               
chr15:38228025-38228176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
80, 106
               

               
Conread position:
               
171-328
               

               
Cow position:
               
chr15:12045651-12045484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
171-328
               

               
Cow position:
               
chr15:37719698-37719539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 111
               

               
Conread position:
               
171-332
               

               
Cow position:
               
chr15:38752834-38752992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
152, 106
               

               
Conread position:
               
171-358
               

               
Cow position:
               
chr15:36422508-36422698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
171-389
               

               
Cow position:
               
chr15:6129064-6128850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 54
               

               
Conread position:
               
171-417
               

               
Cow position:
               
chr15:32234422-32234188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
171-473
               

               
Cow position:
               
chr15:39326611-39326313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
135, 66
               

               
Conread position:
               
171-505
               

               
Cow position:
               
chr15:10246105-10245772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 216
               

               
Conread position:
               
171-513
               

               
Cow position:
               
chr15:5729846-5730181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
171-514
               

               
Cow position:
               
chr15:85357-85006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
7, 162
               

               
Conread position:
               
171-514
               

               
Cow position:
               
chr15:47042753-47042398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 250
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr15:24967691-24968037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 80
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr15:32324318-32323961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 247
               

               
Conread position:
               
172-281
               

               
Cow position:
               
chr15:23085264-23085374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
172-288
               

               
Cow position:
               
chr15:19523875-19523999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-291
               

               
Cow position:
               
chr15:16492345-16492471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-296
               

               
Cow position:
               
chr15:11635308-11635433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-298
               

               
Cow position:
               
chr15:51558295-51558425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
172-299
               

               
Cow position:
               
chr15:17471818-17471948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
172-301
               

               
Cow position:
               
chr15:28206003-28206135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
172-303
               

               
Cow position:
               
chr15:49959428-49959559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
172-305
               

               
Cow position:
               
chr15:1500721-1500858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
172-305
               

               
Cow position:
               
chr15:1508247-1508384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
172-305
               

               
Cow position:
               
chr15:2378334-2378471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
172-308
               

               
Cow position:
               
chr15:14969409-14969546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
172-313
               

               
Cow position:
               
chr15:10199224-10199368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 103
               

               
Conread position:
               
172-313
               

               
Cow position:
               
chr15:20906138-20905994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
172-317
               

               
Cow position:
               
chr15:26380856-26380702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
172-317
               

               
Cow position:
               
chr15:41321061-41320913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
172-319
               

               
Cow position:
               
chr15:14760749-14760593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-320
               

               
Cow position:
               
chr15:22242293-22242449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-321
               

               
Cow position:
               
chr15:27656992-27657151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
172-326
               

               
Cow position:
               
chr15:4500589-4500754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:840256-840095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:13846674-13846515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:17124580-17124415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:25595636-25595475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:26617826-26617992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:26849641-26849484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:29927855-29928019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 134
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:33897713-33897877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:36346685-36346836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:38820593-38820751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:40082879-40083038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 109
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:40562792-40562629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:46676719-46676570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:48052707-48052551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:48095247-48095417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:48818944-48819098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
139, 60
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr15:52791831-52791990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 119
               

               
Conread position:
               
172-331
               

               
Cow position:
               
chr15:4284262-4284430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 115
               

               
Conread position:
               
172-331
               

               
Cow position:
               
chr15:44089274-44089107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
172-331
               

               
Cow position:
               
chr15:44119578-44119411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
172-334
               

               
Cow position:
               
chr15:20566019-20566189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 164
               

               
Conread position:
               
172-339
               

               
Cow position:
               
chr15:52747417-52747590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 131
               

               
Conread position:
               
172-359
               

               
Cow position:
               
chr15:28099002-28099199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
172-363
               

               
Cow position:
               
chr15:10153562-10153756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 152
               

               
Conread position:
               
172-363
               

               
Cow position:
               
chr15:12314457-12314648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
172-365
               

               
Cow position:
               
chr15:34223758-34223959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
172-368
               

               
Cow position:
               
chr15:26529787-26529986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
172-369
               

               
Cow position:
               
chr15:8641999-8642214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
172-373
               

               
Cow position:
               
chr15:4248039-4248249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
172-373
               

               
Cow position:
               
chr15:15154190-15154401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
172-373
               

               
Cow position:
               
chr15:39474044-39473834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 186
               

               
Conread position:
               
172-380
               

               
Cow position:
               
chr15:19002392-19002168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
172-380
               

               
Cow position:
               
chr15:44671449-44671227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
172-383
               

               
Cow position:
               
chr15:11909056-11908840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 138
               

               
Conread position:
               
172-387
               

               
Cow position:
               
chr15:19554035-19553806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-390
               

               
Cow position:
               
chr15:7751023-7750793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
172-391
               

               
Cow position:
               
chr15:38652712-38652482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 125
               

               
Conread position:
               
172-393
               

               
Cow position:
               
chr15:31495327-31495103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
79, 181
               

               
Conread position:
               
172-395
               

               
Cow position:
               
chr15:37970694-37970935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 111
               

               
Conread position:
               
172-396
               

               
Cow position:
               
chr15:9978994-9979224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
172-396
               

               
Cow position:
               
chr15:50674806-50675037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
150, 8
               

               
Conread position:
               
172-398
               

               
Cow position:
               
chr15:6037556-6037329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
172-399
               

               
Cow position:
               
chr15:21903516-21903281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
172-400
               

               
Cow position:
               
chr15:42380819-42381055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
172-411
               

               
Cow position:
               
chr15:14281426-14281688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
172-429
               

               
Cow position:
               
chr15:13395439-13395706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 100
               

               
Conread position:
               
172-429
               

               
Cow position:
               
chr15:36952308-36952044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
172-430
               

               
Cow position:
               
chr15:38827424-38827168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 70
               

               
Conread position:
               
172-432
               

               
Cow position:
               
chr15:41056318-41056046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
172-434
               

               
Cow position:
               
chr15:36846296-36846014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-434
               

               
Cow position:
               
chr15:41528075-41527816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
172-437
               

               
Cow position:
               
chr15:13432373-13432659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-437
               

               
Cow position:
               
chr15:14987886-14988155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-437
               

               
Cow position:
               
chr15:18073609-18073884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
172-443
               

               
Cow position:
               
chr15:4694641-4694915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
172-445
               

               
Cow position:
               
chr15:20723091-20722817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 111
               

               
Conread position:
               
172-448
               

               
Cow position:
               
chr15:18647292-18647554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
217, 79
               

               
Conread position:
               
172-448
               

               
Cow position:
               
chr15:52126799-52126515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 175
               

               
Conread position:
               
172-452
               

               
Cow position:
               
chr15:19942488-19942775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 256
               

               
Conread position:
               
172-469
               

               
Cow position:
               
chr15:4919179-4918869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
65, 171
               

               
Conread position:
               
172-471
               

               
Cow position:
               
chr15:49784390-49784091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 235
               

               
Conread position:
               
172-475
               

               
Cow position:
               
chr15:5409003-5408700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 159
               

               
Conread position:
               
172-476
               

               
Cow position:
               
chr15:31929007-31928694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 233
               

               
Conread position:
               
172-477
               

               
Cow position:
               
chr15:5158262-5158580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
73, 186
               

               
Conread position:
               
172-479
               

               
Cow position:
               
chr15:35425901-35425605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 68
               

               
Conread position:
               
172-482
               

               
Cow position:
               
chr15:5717610-5717921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
70, 78
               

               
Conread position:
               
172-482
               

               
Cow position:
               
chr15:33693481-33693152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
71, 111
               

               
Conread position:
               
172-490
               

               
Cow position:
               
chr15:26573289-26573597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
158, 48
               

               
Conread position:
               
172-492
               

               
Cow position:
               
chr15:10231852-10231521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
154, 78
               

               
Conread position:
               
172-492
               

               
Cow position:
               
chr15:35839206-35838868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
75, 110
               

               
Conread position:
               
172-493
               

               
Cow position:
               
chr15:6227285-6226968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
172-494
               

               
Cow position:
               
chr15:20391386-20391054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
172-498
               

               
Cow position:
               
chr15:1502804-1503131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 144
               

               
Conread position:
               
172-498
               

               
Cow position:
               
chr15:2380256-2380583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 152
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr15:4418511-4418172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
67, 98
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr15:7192354-7192033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
154, 70
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr15:9648798-9648476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr15:17870401-17870057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 245
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr15:36353557-36353897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
172-502
               

               
Cow position:
               
chr15:662573-662241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 225
               

               
Conread position:
               
172-503
               

               
Cow position:
               
chr15:225912-225576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 230
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr15:4179048-4178704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 148
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr15:6462602-6462263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 101
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr15:20534562-20534211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
75, 256
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr15:21366299-21365958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr15:29810016-29810348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr15:30986395-30986052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 73
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr15:39599340-39599675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr15:42142764-42143089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
157, 79
               

               
Conread position:
               
172-506
               

               
Cow position:
               
chr15:22938876-22938535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 188
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr15:25208868-25208531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 233
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr15:26919378-26919040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 43
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr15:36259706-36259365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 57
               

               
Conread position:
               
172-512
               

               
Cow position:
               
chr15:24616458-24616814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 112
               

               
Conread position:
               
172-512
               

               
Cow position:
               
chr15:33624862-33625191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr15:14870646-14870984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 56
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr15:29026992-29026639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 111
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr15:38161891-38162248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr15:49230422-49230104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
77, 101
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr15:20390819-20390459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr15:21608832-21608481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 111
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr15:36435093-36435449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
66, 111
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:1722950-1722607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:2968225-2968577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
66, 232
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:4295651-4296008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:5235100-5234760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:6905430-6905781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
157, 224
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:11646568-11646244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
234, 66
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:11996137-11995782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 104
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:12170153-12170486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
155, 66
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:12304530-12304885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:12722975-12723331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 174
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:17100813-17100466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:17233077-17233437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
58, 232
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:19186732-19186375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 159
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:19402896-19403225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
59, 134
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:20487310-20486969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:22531564-22531900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 98
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:23572798-23572435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 211
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:25667334-25666979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
65, 111
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:26158708-26158373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 225
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:26912177-26911837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:28038684-28039000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
158, 11
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:30047663-30047299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 106
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:38883037-38883396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:40798527-40798185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:40957469-40957821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:43626355-43626710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 232
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:44051590-44051257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 119
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:44658257-44658601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
76, 113
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:46563586-46563250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 91
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:47844197-47843867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:50322502-50322839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 44
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr15:53037071-53036725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 156
               

               
Conread position:
               
172-529
               

               
Cow position:
               
chr15:286363-286736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 222
               

               
Conread position:
               
173-310
               

               
Cow position:
               
chr15:49422090-49421959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
173-326
               

               
Cow position:
               
chr15:5710304-5710453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
173-338
               

               
Cow position:
               
chr15:4735734-4735571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
173-401
               

               
Cow position:
               
chr15:26851332-26851098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 222
               

               
Conread position:
               
173-487
               

               
Cow position:
               
chr15:51307778-51307464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 63
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr15:5726207-5726568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr15:11658691-11658325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 139
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr15:37644881-37645219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
59, 162
               

               
Conread position:
               
174-310
               

               
Cow position:
               
chr15:3591295-3591429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
174-329
               

               
Cow position:
               
chr15:848540-848697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chr15:22444094-22443889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 157
               

               
Conread position:
               
174-373
               

               
Cow position:
               
chr15:42353290-42353487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
155, 74
               

               
Conread position:
               
174-384
               

               
Cow position:
               
chr15:26442107-26442327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
174-389
               

               
Cow position:
               
chr15:53028255-53028480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
174-390
               

               
Cow position:
               
chr15:49491545-49491762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
174-428
               

               
Cow position:
               
chr15:4076224-4076479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
156, 60
               

               
Conread position:
               
174-467
               

               
Cow position:
               
chr15:36793599-36793297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
174-473
               

               
Cow position:
               
chr15:24804907-24804590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 115
               

               
Conread position:
               
174-504
               

               
Cow position:
               
chr15:27900612-27900276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 173
               

               
Conread position:
               
174-505
               

               
Cow position:
               
chr15:28924869-28924530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 235
               

               
Conread position:
               
174-512
               

               
Cow position:
               
chr15:20472651-20472308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 175
               

               
Conread position:
               
174-512
               

               
Cow position:
               
chr15:43031133-43030784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 154
               

               
Conread position:
               
174-513
               

               
Cow position:
               
chr15:23798629-23798283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
155, 73
               

               
Conread position:
               
174-514
               

               
Cow position:
               
chr15:20290165-20289829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 163
               

               
Conread position:
               
174-514
               

               
Cow position:
               
chr15:36391564-36391910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 226
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr15:608036-608390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
71, 184
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr15:795124-794773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 292
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr15:8006871-8007225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 147
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr15:17084099-17084452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 168
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr15:30316667-30316349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 34
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr15:35641905-35642264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 130
               

               
Conread position:
               
174-516
               

               
Cow position:
               
chr15:39405635-39405976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
174-516
               

               
Cow position:
               
chr15:43914205-43913843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 117
               

               
Conread position:
               
175-305
               

               
Cow position:
               
chr15:258438-258572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
175-314
               

               
Cow position:
               
chr15:11630206-11630063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
175-327
               

               
Cow position:
               
chr15:12913605-12913446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
175-328
               

               
Cow position:
               
chr15:9314620-9314779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
175-328
               

               
Cow position:
               
chr15:18941928-18942083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
175-330
               

               
Cow position:
               
chr15:36457723-36457569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 123
               

               
Conread position:
               
175-331
               

               
Cow position:
               
chr15:40844727-40844564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
175-339
               

               
Cow position:
               
chr15:43715224-43715390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
175-347
               

               
Cow position:
               
chr15:14964266-14964092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
153, 84
               

               
Conread position:
               
175-348
               

               
Cow position:
               
chr15:46284022-46283841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
175-390
               

               
Cow position:
               
chr15:49131953-49132176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
75, 181
               

               
Conread position:
               
175-393
               

               
Cow position:
               
chr15:50332869-50333100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
76, 226
               

               
Conread position:
               
175-412
               

               
Cow position:
               
chr15:36388193-36388430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
175-425
               

               
Cow position:
               
chr15:20047496-20047722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
244, 57
               

               
Conread position:
               
175-430
               

               
Cow position:
               
chr15:3695531-3695791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
175-434
               

               
Cow position:
               
chr15:31042776-31043029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
159, 62
               

               
Conread position:
               
175-447
               

               
Cow position:
               
chr15:39286517-39286237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
175-452
               

               
Cow position:
               
chr15:25349868-25350146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
175-467
               

               
Cow position:
               
chr15:19950380-19950669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
76, 43
               

               
Conread position:
               
175-470
               

               
Cow position:
               
chr15:13284929-13285210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
145, 34
               

               
Conread position:
               
175-497
               

               
Cow position:
               
chr15:24982282-24981967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
175-498
               

               
Cow position:
               
chr15:49273856-49274178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 89
               

               
Conread position:
               
175-503
               

               
Cow position:
               
chr15:21803771-21803439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 136
               

               
Conread position:
               
175-503
               

               
Cow position:
               
chr15:47821727-47822040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
151, 67
               

               
Conread position:
               
175-505
               

               
Cow position:
               
chr15:5535672-5535991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
175-505
               

               
Cow position:
               
chr15:9879486-9879162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
175-505
               

               
Cow position:
               
chr15:50350737-50351059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
74, 157
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr15:45478893-45479244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
73, 112
               

               
Conread position:
               
175-513
               

               
Cow position:
               
chr15:14020391-14020714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
154, 67
               

               
Conread position:
               
175-514
               

               
Cow position:
               
chr15:37204964-37205287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
159, 51
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr15:1083476-1083132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr15:7456611-7456941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr15:16667604-16667259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 144
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr15:20459417-20459056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 232
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr15:22530975-22531305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
117, 66
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr15:24994617-24994277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr15:27973312-27972971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
147, 70
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr15:30001590-30001929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
74, 178
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr15:31857483-31857832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr15:36887733-36888067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr15:37381523-37381871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 219
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr15:38103961-38103650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
244, 66
               

               
Conread position:
               
176-324
               

               
Cow position:
               
chr15:21363058-21362906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
72, 102
               

               
Conread position:
               
176-500
               

               
Cow position:
               
chr15:22939429-22939096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
72, 220
               

               
Conread position:
               
176-502
               

               
Cow position:
               
chr15:5443876-5444212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 200
               

               
Conread position:
               
176-502
               

               
Cow position:
               
chr15:24411334-24411644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
277, 61
               

               
Conread position:
               
176-504
               

               
Cow position:
               
chr15:22930455-22930107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
176-515
               

               
Cow position:
               
chr15:21893675-21894026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
176-515
               

               
Cow position:
               
chr15:33284771-33285125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
176-515
               

               
Cow position:
               
chr15:39598140-39598486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 228
               

               
Conread position:
               
177-283
               

               
Cow position:
               
chr15:46811-46919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
177-328
               

               
Cow position:
               
chr15:9921868-9921715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
177-328
               

               
Cow position:
               
chr15:11072302-11072147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
177-328
               

               
Cow position:
               
chr15:38196181-38196026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
177-501
               

               
Cow position:
               
chr15:22553645-22553313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 268
               

               
Conread position:
               
177-508
               

               
Cow position:
               
chr15:244678-245013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
177-515
               

               
Cow position:
               
chr15:1330213-1329859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 239
               

               
Conread position:
               
177-515
               

               
Cow position:
               
chr15:8353936-8354287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
177-515
               

               
Cow position:
               
chr15:19119688-19119360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
216, 26
               

               
Conread position:
               
179-515
               

               
Cow position:
               
chr15:50302085-50302427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 132
               

               
Conread position:
               
180-326
               

               
Cow position:
               
chr15:16230128-16230273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
180-328
               

               
Cow position:
               
chr15:18704034-18703882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
180-390
               

               
Cow position:
               
chr15:20950151-20950371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 159
               

               
Conread position:
               
180-410
               

               
Cow position:
               
chr15:47773581-47773354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
143, 61
               

               
Conread position:
               
180-444
               

               
Cow position:
               
chr15:10442612-10442331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
65, 160
               

               
Conread position:
               
180-506
               

               
Cow position:
               
chr15:20422866-20422544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
208, 15
               

               
Conread position:
               
180-509
               

               
Cow position:
               
chr15:20370553-20370219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
71, 201
               

               
Conread position:
               
181-501
               

               
Cow position:
               
chr15:30981852-30982154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 28
               

               
Conread position:
               
181-514
               

               
Cow position:
               
chr15:16822850-16823180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 16
               

               
Conread position:
               
181-515
               

               
Cow position:
               
chr15:16543538-16543214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 22
               

               
Conread position:
               
181-515
               

               
Cow position:
               
chr15:22532153-22532481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 176
               

               
Conread position:
               
182-325
               

               
Cow position:
               
chr15:15025068-15025204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
182-396
               

               
Cow position:
               
chr15:49483527-49483750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
68, 90
               

               
Conread position:
               
182-461
               

               
Cow position:
               
chr15:40379113-40379401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 199
               

               
Conread position:
               
182-473
               

               
Cow position:
               
chr15:24797902-24797610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
67, 103
               

               
Conread position:
               
182-502
               

               
Cow position:
               
chr15:18671548-18671222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
182-504
               

               
Cow position:
               
chr15:16603731-16604055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 7
               

               
Conread position:
               
182-508
               

               
Cow position:
               
chr15:24031097-24031423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 108
               

               
Conread position:
               
182-508
               

               
Cow position:
               
chr15:34896662-34896999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 98
               

               
Conread position:
               
182-509
               

               
Cow position:
               
chr15:21420848-21421181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
182-514
               

               
Cow position:
               
chr15:11011692-11011362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 34
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr15:26079445-26079120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 194
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr15:50568080-50568400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
62, 215
               

               
Conread position:
               
183-289
               

               
Cow position:
               
chr15:48014940-48015047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
183-357
               

               
Cow position:
               
chr15:12059486-12059654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
139, 68
               

               
Conread position:
               
183-358
               

               
Cow position:
               
chr15:48326326-48326145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
183-366
               

               
Cow position:
               
chr15:37637349-37637526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
183-380
               

               
Cow position:
               
chr15:13669946-13669755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
145, 54
               

               
Conread position:
               
183-385
               

               
Cow position:
               
chr15:10049412-10049198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
51, 156
               

               
Conread position:
               
183-391
               

               
Cow position:
               
chr15:44436659-44436870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
183-464
               

               
Cow position:
               
chr15:9465576-9465870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 175
               

               
Conread position:
               
183-500
               

               
Cow position:
               
chr15:17337274-17337587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 15
               

               
Conread position:
               
183-503
               

               
Cow position:
               
chr15:11559450-11559123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
183-504
               

               
Cow position:
               
chr15:33306022-33306342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
183-512
               

               
Cow position:
               
chr15:8579235-8578884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 102
               

               
Conread position:
               
183-515
               

               
Cow position:
               
chr15:1297648-1297981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
183-515
               

               
Cow position:
               
chr15:4485050-4485385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 156
               

               
Conread position:
               
183-515
               

               
Cow position:
               
chr15:5420980-5420642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 267
               

               
Conread position:
               
183-515
               

               
Cow position:
               
chr15:25906820-25907152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 70
               

               
Conread position:
               
183-516
               

               
Cow position:
               
chr15:3700381-3700041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 168
               

               
Conread position:
               
184-340
               

               
Cow position:
               
chr15:5691005-5691166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
69, 141
               

               
Conread position:
               
184-360
               

               
Cow position:
               
chr15:41534557-41534738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
184-399
               

               
Cow position:
               
chr15:27063614-27063394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
184-400
               

               
Cow position:
               
chr15:39090221-39090424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
141, 58
               

               
Conread position:
               
184-500
               

               
Cow position:
               
chr15:26903096-26903425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
53, 96
               

               
Conread position:
               
184-512
               

               
Cow position:
               
chr15:6969890-6970223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
184-512
               

               
Cow position:
               
chr15:33642993-33643330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
184-513
               

               
Cow position:
               
chr15:35112970-35112636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
145, 21
               

               
Conread position:
               
185-303
               

               
Cow position:
               
chr15:14572584-14572702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-394
               

               
Cow position:
               
chr15:921656-921865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
185-468
               

               
Cow position:
               
chr15:14888733-14888444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 66
               

               
Conread position:
               
185-515
               

               
Cow position:
               
chr15:17196049-17196385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 197
               

               
Conread position:
               
185-515
               

               
Cow position:
               
chr15:34139895-34140221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
186-515
               

               
Cow position:
               
chr15:21583022-21582675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 207
               

               
Conread position:
               
186-515
               

               
Cow position:
               
chr15:23696997-23696667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 101
               

               
Conread position:
               
188-515
               

               
Cow position:
               
chr15:2953226-2952885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
50, 268
               

               
Conread position:
               
189-473
               

               
Cow position:
               
chr15:34284502-34284210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 204
               

               
Conread position:
               
190-515
               

               
Cow position:
               
chr15:1804424-1804088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
54, 50
               

               
Conread position:
               
190-516
               

               
Cow position:
               
chr15:17762817-17763151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 158
               

               
Conread position:
               
194-396
               

               
Cow position:
               
chr15:52432251-52432469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 210
               

               
Conread position:
               
194-505
               

               
Cow position:
               
chr15:23180358-23180671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 156
               

               
Conread position:
               
195-313
               

               
Cow position:
               
chr15:53503740-53503858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
196-403
               

               
Cow position:
               
chr15:864095-864308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 123
               

               
Conread position:
               
200-482
               

               
Cow position:
               
chr15:50664551-50664275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
121, 143
               

               
Conread position:
               
203-317
               

               
Cow position:
               
chr15:23333233-23333125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
205-506
               

               
Cow position:
               
chr15:10512345-10512036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
208-433
               

               
Cow position:
               
chr15:32977911-32977685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
120, 24
               

               
Conread position:
               
212-515
               

               
Cow position:
               
chr15:39082147-39082444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
17, 220
               

               
Conread position:
               
216-389
               

               
Cow position:
               
chr15:14261314-14261142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
110, 7
               

               
Conread position:
               
216-408
               

               
Cow position:
               
chr15:41582824-41583014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
216-417
               

               
Cow position:
               
chr15:31024934-31025134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
216-502
               

               
Cow position:
               
chr15:9106976-9107267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
112, 66
               

               
Conread position:
               
223-339
               

               
Cow position:
               
chr15:36486479-36486591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
229-379
               

               
Cow position:
               
chr15:18587719-18587568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
230-331
               

               
Cow position:
               
chr15:1984250-1984355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
230-357
               

               
Cow position:
               
chr15:24953567-24953438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
230-383
               

               
Cow position:
               
chr15:48590286-48590134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 105
               

               
Conread position:
               
230-412
               

               
Cow position:
               
chr15:50660577-50660768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
232-515
               

               
Cow position:
               
chr15:275610-275887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 188
               

               
Conread position:
               
233-515
               

               
Cow position:
               
chr15:10457054-10456769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
236-373
               

               
Cow position:
               
chr15:18776791-18776650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
236-417
               

               
Cow position:
               
chr15:34751053-34751228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
237-328
               

               
Cow position:
               
chr15:18738541-18738451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
237-328
               

               
Cow position:
               
chr15:28788175-28788269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
237-394
               

               
Cow position:
               
chr15:11912594-11912437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
237-394
               

               
Cow position:
               
chr15:25650449-25650291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
237-395
               

               
Cow position:
               
chr15:27016286-27016127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
237-429
               

               
Cow position:
               
chr15:44280063-44280256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 115
               

               
Conread position:
               
237-467
               

               
Cow position:
               
chr15:10563542-10563309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
237-477
               

               
Cow position:
               
chr15:31560426-31560197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
237-500
               

               
Cow position:
               
chr15:42789187-42788922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 168
               

               
Conread position:
               
237-503
               

               
Cow position:
               
chr15:13554315-13554586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
93, 150
               

               
Conread position:
               
237-505
               

               
Cow position:
               
chr15:16583729-16583472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
237-505
               

               
Cow position:
               
chr15:17353684-17353414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 105
               

               
Conread position:
               
237-505
               

               
Cow position:
               
chr15:39621299-39621577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 276
               

               
Conread position:
               
237-511
               

               
Cow position:
               
chr15:47592702-47592419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
237-512
               

               
Cow position:
               
chr15:10608342-10608065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
237-512
               

               
Cow position:
               
chr15:46868752-46868471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 60
               

               
Conread position:
               
237-512
               

               
Cow position:
               
chr15:49257825-49258103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 142
               

               
Conread position:
               
237-513
               

               
Cow position:
               
chr15:22871575-22871848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
237-513
               

               
Cow position:
               
chr15:29604739-29604474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 151
               

               
Conread position:
               
237-514
               

               
Cow position:
               
chr15:2141342-2141057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
14, 196
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr15:10335715-10335999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr15:12655954-12655668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
85, 142
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr15:39316881-39316591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 202
               

               
Conread position:
               
237-526
               

               
Cow position:
               
chr15:43788223-43788498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
238-347
               

               
Cow position:
               
chr15:39911825-39911936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
238-381
               

               
Cow position:
               
chr15:2389660-2389806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
238-434
               

               
Cow position:
               
chr15:14176537-14176339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 154
               

               
Conread position:
               
238-448
               

               
Cow position:
               
chr15:31175755-31175977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
238-463
               

               
Cow position:
               
chr15:35441114-35440884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
238-514
               

               
Cow position:
               
chr15:25386401-25386685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 148
               

               
Conread position:
               
240-416
               

               
Cow position:
               
chr15:40594543-40594360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
240-467
               

               
Cow position:
               
chr15:5657800-5658038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
240-493
               

               
Cow position:
               
chr15:5929863-5930112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
240-499
               

               
Cow position:
               
chr15:16616157-16616429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
240-500
               

               
Cow position:
               
chr15:29330972-29331232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
167, 9
               

               
Conread position:
               
240-515
               

               
Cow position:
               
chr15:6530882-6530603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
240-515
               

               
Cow position:
               
chr15:16476764-16476505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
240-515
               

               
Cow position:
               
chr15:33976729-33976445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
241-509
               

               
Cow position:
               
chr15:12870897-12870626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
89, 8
               

               
Conread position:
               
242-336
               

               
Cow position:
               
chr15:43728801-43728898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
242-429
               

               
Cow position:
               
chr15:9497534-9497344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 157
               

               
Conread position:
               
242-515
               

               
Cow position:
               
chr15:44640862-44641140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 156
               

               
Conread position:
               
243-416
               

               
Cow position:
               
chr15:41087934-41087757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 144
               

               
Conread position:
               
243-464
               

               
Cow position:
               
chr15:12615-12843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
243-515
               

               
Cow position:
               
chr15:362993-363267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
83, 187
               

               
Conread position:
               
243-515
               

               
Cow position:
               
chr15:16307390-16307656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 6
               

               
Conread position:
               
243-515
               

               
Cow position:
               
chr15:52611270-52611553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
244-434
               

               
Cow position:
               
chr15:16908403-16908592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
246-515
               

               
Cow position:
               
chr15:26404257-26404518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
247-515
               

               
Cow position:
               
chr15:41000098-40999825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
248-415
               

               
Cow position:
               
chr15:30794953-30795124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
248-477
               

               
Cow position:
               
chr15:28258484-28258250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 133
               

               
Conread position:
               
249-435
               

               
Cow position:
               
chr15:22442304-22442111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
249-477
               

               
Cow position:
               
chr15:9781445-9781670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
104, 73
               

               
Conread position:
               
249-477
               

               
Cow position:
               
chr15:48711080-48710848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
146, 202
               

               
Conread position:
               
249-504
               

               
Cow position:
               
chr15:2145164-2144898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 105
               

               
Conread position:
               
249-513
               

               
Cow position:
               
chr15:21389189-21388926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
249-513
               

               
Cow position:
               
chr15:34207213-34206947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 74
               

               
Conread position:
               
249-515
               

               
Cow position:
               
chr15:22136664-22136926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
167, 84
               

               
Conread position:
               
250-509
               

               
Cow position:
               
chr15:45584708-45584959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
163, 78
               

               
Conread position:
               
250-518
               

               
Cow position:
               
chr15:52158022-52158285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
91, 52
               

               
Conread position:
               
251-428
               

               
Cow position:
               
chr15:44237393-44237573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
74, 150
               

               
Conread position:
               
251-434
               

               
Cow position:
               
chr15:37284429-37284616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
252-427
               

               
Cow position:
               
chr15:78552-78727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
110, 6
               

               
Conread position:
               
253-505
               

               
Cow position:
               
chr15:37931781-37931529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
142, 81
               

               
Conread position:
               
254-466
               

               
Cow position:
               
chr15:10660576-10660357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
254-477
               

               
Cow position:
               
chr15:15573856-15573625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 125
               

               
Conread position:
               
257-428
               

               
Cow position:
               
chr15:40415657-40415484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
257-515
               

               
Cow position:
               
chr15:29340043-29340307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
257-515
               

               
Cow position:
               
chr15:41620208-41619943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
258-515
               

               
Cow position:
               
chr15:20351815-20352073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
76, 135
               

               
Conread position:
               
259-506
               

               
Cow position:
               
chr15:4093949-4093698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
64, 128
               

               
Conread position:
               
260-513
               

               
Cow position:
               
chr15:47843266-47843016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 92
               

               
Conread position:
               
260-515
               

               
Cow position:
               
chr15:6905062-6905305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
63, 45
               

               
Conread position:
               
261-515
               

               
Cow position:
               
chr15:13387063-13387323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
265-505
               

               
Cow position:
               
chr15:26117514-26117744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
266-512
               

               
Cow position:
               
chr15:24045112-24044858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
267-503
               

               
Cow position:
               
chr15:4534903-4535142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
267-512
               

               
Cow position:
               
chr15:24128023-24128266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 171
               

               
Conread position:
               
269-505
               

               
Cow position:
               
chr15:35417631-35417388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 127
               

               
Conread position:
               
270-514
               

               
Cow position:
               
chr15:3726119-3726361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
270-515
               

               
Cow position:
               
chr15:16639772-16640024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 158
               

               
Conread position:
               
272-499
               

               
Cow position:
               
chr15:23568130-23567893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
58, 119
               

               
Conread position:
               
273-507
               

               
Cow position:
               
chr15:41360952-41360728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
57, 95
               

               
Conread position:
               
274-515
               

               
Cow position:
               
chr15:23768257-23768019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 8
               

               
Conread position:
               
281-515
               

               
Cow position:
               
chr15:47280133-47279896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 115
               

               
Conread position:
               
282-515
               

               
Cow position:
               
chr15:13515373-13515612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 121
               

               
Conread position:
               
295-515
               

               
Cow position:
               
chr15:9871395-9871170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
312-515
               

               
Cow position:
               
chr15:38877267-38877063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 110
               

               
Conread position:
               
317-499
               

               
Cow position:
               
chr15:34104302-34104499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
317-515
               

               
Cow position:
               
chr15:24305437-24305238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
102, 136
               

               
Conread position:
               
331-505
               

               
Cow position:
               
chr15:23487109-23486935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
338-514
               

               
Cow position:
               
chr15:40009588-40009407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
338-515
               

               
Cow position:
               
chr15:6586651-6586473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
81, 60
               

               
Conread position:
               
339-505
               

               
Cow position:
               
chr15:23702846-23703008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
347-515
               

               
Cow position:
               
chr15:41582983-41583154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
350-515
               

               
Cow position:
               
chr15:47105119-47105277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
351-515
               

               
Cow position:
               
chr15:15708035-15707867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
352-515
               

               
Cow position:
               
chr15:5715631-5715796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
363-515
               

               
Cow position:
               
chr15:36422749-36422897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 35
               
Show alignments to all cow chromosomes.