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Cow genome map

           
Conread name:
           
Ova1-OVRM10096D07
        

               
Conread position:
               
110-506
               

               
Cow position:
               
chr27:16704946-16705349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
118-509
               

               
Cow position:
               
chr27:23545632-23545215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
125-328
               

               
Cow position:
               
chr27:16246520-16246722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
128-489
               

               
Cow position:
               
chr27:4944793-4944431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
132-391
               

               
Cow position:
               
chr27:26852865-26852596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
139-437
               

               
Cow position:
               
chr27:10598713-10599008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
140-328
               

               
Cow position:
               
chr27:14005141-14005331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
140-514
               

               
Cow position:
               
chr27:17331218-17331609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
140-515
               

               
Cow position:
               
chr27:15453935-15454319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
142-328
               

               
Cow position:
               
chr27:5539963-5539775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
143-356
               

               
Cow position:
               
chr27:26504034-26504253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
143-440
               

               
Cow position:
               
chr27:20517382-20517695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
144-416
               

               
Cow position:
               
chr27:31004672-31004951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
145-314
               

               
Cow position:
               
chr27:4487048-4486871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
145-466
               

               
Cow position:
               
chr27:23484946-23485276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 23
               

               
Conread position:
               
145-515
               

               
Cow position:
               
chr27:22547656-22547297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 5
               

               
Conread position:
               
145-515
               

               
Cow position:
               
chr27:24228072-24227682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
146-515
               

               
Cow position:
               
chr27:16284223-16284580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 24
               

               
Conread position:
               
150-307
               

               
Cow position:
               
chr27:3698936-3698773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
150-390
               

               
Cow position:
               
chr27:22245379-22245611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
175, 17
               

               
Conread position:
               
150-514
               

               
Cow position:
               
chr27:15669037-15668660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
150-515
               

               
Cow position:
               
chr27:26226550-26226179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
150-515
               

               
Cow position:
               
chr27:26428393-26428021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 269
               

               
Conread position:
               
151-319
               

               
Cow position:
               
chr27:67974-68137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
151-331
               

               
Cow position:
               
chr27:28896612-28896809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
151-392
               

               
Cow position:
               
chr27:7343690-7343441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
151-508
               

               
Cow position:
               
chr27:22386624-22386974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
152-515
               

               
Cow position:
               
chr27:21669374-21669013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 247
               

               
Conread position:
               
153-404
               

               
Cow position:
               
chr27:26437384-26437122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
153-462
               

               
Cow position:
               
chr27:24240093-24240404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
153-514
               

               
Cow position:
               
chr27:19669063-19668682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
153-515
               

               
Cow position:
               
chr27:26441288-26440949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
236, 13
               

               
Conread position:
               
154-310
               

               
Cow position:
               
chr27:1779107-1778953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
154-353
               

               
Cow position:
               
chr27:30884770-30884975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
154-374
               

               
Cow position:
               
chr27:26481457-26481226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
154-388
               

               
Cow position:
               
chr27:26121494-26121743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
154-514
               

               
Cow position:
               
chr27:26509416-26509050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 152
               

               
Conread position:
               
154-515
               

               
Cow position:
               
chr27:13251766-13252117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
155-327
               

               
Cow position:
               
chr27:29246405-29246228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
155-328
               

               
Cow position:
               
chr27:31515811-31515629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
76, 17
               

               
Conread position:
               
155-434
               

               
Cow position:
               
chr27:20628800-20629090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
48, 234
               

               
Conread position:
               
156-311
               

               
Cow position:
               
chr27:2934251-2934407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
156-318
               

               
Cow position:
               
chr27:22212916-22213068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
156-329
               

               
Cow position:
               
chr27:23495953-23495788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
156-344
               

               
Cow position:
               
chr27:10581275-10581470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 154
               

               
Conread position:
               
156-390
               

               
Cow position:
               
chr27:789049-788812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
156-505
               

               
Cow position:
               
chr27:20283385-20283743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
156-509
               

               
Cow position:
               
chr27:27856082-27856436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
156-515
               

               
Cow position:
               
chr27:15865972-15866335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
156-515
               

               
Cow position:
               
chr27:21978401-21978025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
91, 125
               

               
Conread position:
               
156-515
               

               
Cow position:
               
chr27:27003519-27003165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
157-335
               

               
Cow position:
               
chr27:5780847-5781018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
171, 24
               

               
Conread position:
               
157-432
               

               
Cow position:
               
chr27:24035534-24035263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
16, 178
               

               
Conread position:
               
157-498
               

               
Cow position:
               
chr27:23510718-23511084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 175
               

               
Conread position:
               
157-512
               

               
Cow position:
               
chr27:7615326-7614980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
196, 78
               

               
Conread position:
               
157-515
               

               
Cow position:
               
chr27:31231334-31230982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
159-515
               

               
Cow position:
               
chr27:7731513-7731137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
160-361
               

               
Cow position:
               
chr27:13204211-13204415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
160-361
               

               
Cow position:
               
chr27:30798058-30797856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
160-505
               

               
Cow position:
               
chr27:20637312-20636965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 115
               

               
Conread position:
               
160-513
               

               
Cow position:
               
chr27:30914751-30915115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 223
               

               
Conread position:
               
162-310
               

               
Cow position:
               
chr27:26939826-26939979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
163-309
               

               
Cow position:
               
chr27:23862672-23862537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
163-503
               

               
Cow position:
               
chr27:20354348-20354683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 140
               

               
Conread position:
               
165-500
               

               
Cow position:
               
chr27:23735719-23736058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 123
               

               
Conread position:
               
168-503
               

               
Cow position:
               
chr27:23890687-23891040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 192
               

               
Conread position:
               
169-369
               

               
Cow position:
               
chr27:20770761-20770564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
154, 46
               

               
Conread position:
               
169-390
               

               
Cow position:
               
chr27:10323599-10323822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
171-273
               

               
Cow position:
               
chr27:29056067-29056171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 89
               

               
Conread position:
               
171-324
               

               
Cow position:
               
chr27:18688655-18688493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 112
               

               
Conread position:
               
171-328
               

               
Cow position:
               
chr27:9253355-9253193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
171-328
               

               
Cow position:
               
chr27:18791757-18791589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
171-328
               

               
Cow position:
               
chr27:20484490-20484650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
171-334
               

               
Cow position:
               
chr27:29183469-29183287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
171-339
               

               
Cow position:
               
chr27:20325114-20325285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
171-363
               

               
Cow position:
               
chr27:18491324-18491509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
171-363
               

               
Cow position:
               
chr27:19576566-19576365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
171-472
               

               
Cow position:
               
chr27:26112161-26111841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
171-489
               

               
Cow position:
               
chr27:31219030-31219337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
171-513
               

               
Cow position:
               
chr27:19387778-19388123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 34
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr27:20045653-20045997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr27:27245605-27245242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr27:29185088-29184728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 171
               

               
Conread position:
               
172-274
               

               
Cow position:
               
chr27:14675414-14675309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
172-274
               

               
Cow position:
               
chr27:26315382-26315275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
172-280
               

               
Cow position:
               
chr27:21570619-21570510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-298
               

               
Cow position:
               
chr27:20302334-20302457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
172-301
               

               
Cow position:
               
chr27:6392487-6392610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
172-303
               

               
Cow position:
               
chr27:23527741-23527606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
172-308
               

               
Cow position:
               
chr27:21448064-21447929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
172-309
               

               
Cow position:
               
chr27:28192854-28192714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
172-310
               

               
Cow position:
               
chr27:19991907-19992051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
172-313
               

               
Cow position:
               
chr27:21054215-21054365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
172-314
               

               
Cow position:
               
chr27:20561346-20561488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
172-318
               

               
Cow position:
               
chr27:25382379-25382241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
172-320
               

               
Cow position:
               
chr27:4195313-4195459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 86
               

               
Conread position:
               
172-321
               

               
Cow position:
               
chr27:11349043-11349193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
172-323
               

               
Cow position:
               
chr27:21101534-21101375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr27:11208799-11208638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 159
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr27:19074265-19074105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 122
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr27:19779635-19779794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 24
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr27:21660894-21661053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr27:28062436-28062281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr27:28476350-28476196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr27:29877718-29877556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
172-326
               

               
Cow position:
               
chr27:178621-178781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-326
               

               
Cow position:
               
chr27:16047729-16047580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
172-327
               

               
Cow position:
               
chr27:4414057-4413900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
172-327
               

               
Cow position:
               
chr27:22748086-22748247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr27:2036484-2036640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr27:16505148-16504991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr27:20081373-20081208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr27:20266468-20266305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr27:21419426-21419270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr27:22583501-22583667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr27:23232670-23232836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 116
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr27:26118255-26118420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr27:26983921-26984082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr27:27606536-27606376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr27:28015977-28015812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr27:31153797-31153637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
172-329
               

               
Cow position:
               
chr27:3498314-3498472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
172-331
               

               
Cow position:
               
chr27:11145640-11145802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 103
               

               
Conread position:
               
172-334
               

               
Cow position:
               
chr27:6151072-6151227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
151, 67
               

               
Conread position:
               
172-335
               

               
Cow position:
               
chr27:9504311-9504483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
172-335
               

               
Cow position:
               
chr27:22102883-22102716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
172-339
               

               
Cow position:
               
chr27:4398727-4398557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
84, 62
               

               
Conread position:
               
172-339
               

               
Cow position:
               
chr27:11528687-11528862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
172-340
               

               
Cow position:
               
chr27:24358098-24358268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
78, 124
               

               
Conread position:
               
172-346
               

               
Cow position:
               
chr27:27529056-27528879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
172-347
               

               
Cow position:
               
chr27:16872174-16872001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 65
               

               
Conread position:
               
172-349
               

               
Cow position:
               
chr27:27450125-27449941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
172-355
               

               
Cow position:
               
chr27:2949558-2949377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
154, 31
               

               
Conread position:
               
172-356
               

               
Cow position:
               
chr27:12284752-12284945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 132
               

               
Conread position:
               
172-362
               

               
Cow position:
               
chr27:19741633-19741451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
151, 79
               

               
Conread position:
               
172-363
               

               
Cow position:
               
chr27:29614800-29615000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
172-368
               

               
Cow position:
               
chr27:20548568-20548774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
172-368
               

               
Cow position:
               
chr27:20888493-20888683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
157, 76
               

               
Conread position:
               
172-368
               

               
Cow position:
               
chr27:24693176-24693376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
69, 139
               

               
Conread position:
               
172-372
               

               
Cow position:
               
chr27:11133846-11134051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
69, 195
               

               
Conread position:
               
172-376
               

               
Cow position:
               
chr27:24223713-24223923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
172-381
               

               
Cow position:
               
chr27:23957276-23957492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 175
               

               
Conread position:
               
172-381
               

               
Cow position:
               
chr27:24952194-24951986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
172-385
               

               
Cow position:
               
chr27:15003221-15002998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
172-388
               

               
Cow position:
               
chr27:10404359-10404133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 118
               

               
Conread position:
               
172-388
               

               
Cow position:
               
chr27:22180008-22179786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
172-389
               

               
Cow position:
               
chr27:27740535-27740307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 135
               

               
Conread position:
               
172-390
               

               
Cow position:
               
chr27:31169347-31169125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 105
               

               
Conread position:
               
172-391
               

               
Cow position:
               
chr27:15315281-15315503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
172-391
               

               
Cow position:
               
chr27:31386872-31386644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
76, 180
               

               
Conread position:
               
172-392
               

               
Cow position:
               
chr27:31556852-31557064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
172-394
               

               
Cow position:
               
chr27:27055054-27055275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
172-395
               

               
Cow position:
               
chr27:9977444-9977675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
172-396
               

               
Cow position:
               
chr27:8790984-8790750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
172-396
               

               
Cow position:
               
chr27:16512409-16512180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 177
               

               
Conread position:
               
172-398
               

               
Cow position:
               
chr27:26617173-26617398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
172-403
               

               
Cow position:
               
chr27:21993941-21993720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 128
               

               
Conread position:
               
172-410
               

               
Cow position:
               
chr27:20485803-20486062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
172-415
               

               
Cow position:
               
chr27:20897262-20897015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 155
               

               
Conread position:
               
172-415
               

               
Cow position:
               
chr27:29597987-29597741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
76, 59
               

               
Conread position:
               
172-417
               

               
Cow position:
               
chr27:11982890-11982638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
73, 140
               

               
Conread position:
               
172-417
               

               
Cow position:
               
chr27:19508770-19509025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
172-431
               

               
Cow position:
               
chr27:26794026-26793763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
70, 105
               

               
Conread position:
               
172-433
               

               
Cow position:
               
chr27:6981704-6981947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
172-440
               

               
Cow position:
               
chr27:12425046-12425324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 115
               

               
Conread position:
               
172-440
               

               
Cow position:
               
chr27:26853593-26853321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
172-442
               

               
Cow position:
               
chr27:22550012-22549736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 216
               

               
Conread position:
               
172-461
               

               
Cow position:
               
chr27:31151142-31151434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
172-468
               

               
Cow position:
               
chr27:27405311-27405005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
75, 159
               

               
Conread position:
               
172-469
               

               
Cow position:
               
chr27:29164533-29164830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
172-473
               

               
Cow position:
               
chr27:22225811-22225526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
202, 66
               

               
Conread position:
               
172-482
               

               
Cow position:
               
chr27:591010-590687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
76, 8
               

               
Conread position:
               
172-496
               

               
Cow position:
               
chr27:23918276-23917944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
47, 89
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr27:18507403-18507736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 233
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr27:18558116-18558456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
66, 159
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr27:30407289-30406941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
172-501
               

               
Cow position:
               
chr27:23929736-23930069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
154, 64
               

               
Conread position:
               
172-503
               

               
Cow position:
               
chr27:20828946-20828613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr27:10307545-10307197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
73, 228
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr27:11435569-11435220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
68, 128
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr27:18543746-18544100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
81, 229
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr27:21990901-21991257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 111
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr27:25809758-25809414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 163
               

               
Conread position:
               
172-506
               

               
Cow position:
               
chr27:1637168-1636841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
157, 75
               

               
Conread position:
               
172-506
               

               
Cow position:
               
chr27:20749244-20748907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
181, 88
               

               
Conread position:
               
172-506
               

               
Cow position:
               
chr27:28496612-28496276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
172-507
               

               
Cow position:
               
chr27:23594077-23594419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 227
               

               
Conread position:
               
172-507
               

               
Cow position:
               
chr27:26425981-26426308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr27:16786589-16786928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
71, 107
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr27:23632367-23632703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr27:26434055-26433710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 243
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr27:30764790-30765143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 132
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr27:30868993-30868637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
68, 252
               

               
Conread position:
               
172-510
               

               
Cow position:
               
chr27:26087078-26087402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
172-511
               

               
Cow position:
               
chr27:29831950-29831580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
65, 197
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr27:30890059-30890396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 92
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr27:6787710-6788066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 116
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr27:7346428-7346774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 112
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr27:16514091-16513773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr27:19500478-19500124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
65, 111
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr27:24477184-24477523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
164, 70
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:426728-427080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 239
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:7412151-7412490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 234
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:8353253-8353584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:11151428-11151787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 80
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:11480880-11480518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:12515952-12516306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 224
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:14670622-14670273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 264
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:16103569-16103915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:16478564-16478230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 27
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:17397693-17397339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:20553018-20552649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:22035613-22035266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 213
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:22171060-22171411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:26999665-26999308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 106
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:27389269-27388913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 303
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:27438750-27438393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
76, 207
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:28018081-28018444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 249
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:28206562-28206905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 159
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:28922137-28921789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
71, 186
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:28932044-28931680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
76, 230
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr27:31373214-31372868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
137, 79
               

               
Conread position:
               
172-522
               

               
Cow position:
               
chr27:23452221-23452578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
172-523
               

               
Cow position:
               
chr27:20093055-20092718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 64
               

               
Conread position:
               
173-308
               

               
Cow position:
               
chr27:26467802-26467658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
173-310
               

               
Cow position:
               
chr27:18215400-18215262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
173-313
               

               
Cow position:
               
chr27:22150934-22150789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
173-328
               

               
Cow position:
               
chr27:19557152-19557308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
173-328
               

               
Cow position:
               
chr27:22497787-22497942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
120, 77
               

               
Conread position:
               
173-328
               

               
Cow position:
               
chr27:30444915-30444760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
173-329
               

               
Cow position:
               
chr27:24755370-24755526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
173-332
               

               
Cow position:
               
chr27:29961817-29961658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
173-377
               

               
Cow position:
               
chr27:6162644-6162438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
149, 86
               

               
Conread position:
               
173-389
               

               
Cow position:
               
chr27:18435371-18435148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
173-417
               

               
Cow position:
               
chr27:31210309-31210558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 109
               

               
Conread position:
               
173-444
               

               
Cow position:
               
chr27:12459047-12459321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 175
               

               
Conread position:
               
173-505
               

               
Cow position:
               
chr27:30582499-30582841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
173-511
               

               
Cow position:
               
chr27:24331473-24331832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 201
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr27:8168663-8168318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr27:27460819-27460464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 145
               

               
Conread position:
               
174-308
               

               
Cow position:
               
chr27:30441462-30441605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
174-320
               

               
Cow position:
               
chr27:23760218-23760069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
174-325
               

               
Cow position:
               
chr27:20048397-20048551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
174-330
               

               
Cow position:
               
chr27:31157570-31157733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
74, 106
               

               
Conread position:
               
174-331
               

               
Cow position:
               
chr27:18873813-18873971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
174-331
               

               
Cow position:
               
chr27:26400957-26400798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
174-347
               

               
Cow position:
               
chr27:1067336-1067510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
174-375
               

               
Cow position:
               
chr27:20612281-20612491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
174-390
               

               
Cow position:
               
chr27:26245786-26245564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 163
               

               
Conread position:
               
174-403
               

               
Cow position:
               
chr27:6241432-6241192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
174-405
               

               
Cow position:
               
chr27:23994655-23994421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
67, 128
               

               
Conread position:
               
174-434
               

               
Cow position:
               
chr27:19932826-19933093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 168
               

               
Conread position:
               
174-448
               

               
Cow position:
               
chr27:5553232-5553509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
174-472
               

               
Cow position:
               
chr27:20514585-20514889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
174-476
               

               
Cow position:
               
chr27:16965335-16965645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
64, 169
               

               
Conread position:
               
174-483
               

               
Cow position:
               
chr27:6924842-6925168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
74, 168
               

               
Conread position:
               
174-496
               

               
Cow position:
               
chr27:18646389-18646053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
63, 90
               

               
Conread position:
               
174-500
               

               
Cow position:
               
chr27:7935395-7935059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr27:20078625-20078965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
74, 163
               

               
Conread position:
               
174-503
               

               
Cow position:
               
chr27:22513921-22513577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
79, 233
               

               
Conread position:
               
174-505
               

               
Cow position:
               
chr27:299614-299286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 55
               

               
Conread position:
               
174-505
               

               
Cow position:
               
chr27:27632833-27632509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
174-505
               

               
Cow position:
               
chr27:28002043-28001709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
155, 67
               

               
Conread position:
               
174-505
               

               
Cow position:
               
chr27:30814177-30814515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
174-512
               

               
Cow position:
               
chr27:10979620-10979968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
73, 109
               

               
Conread position:
               
174-513
               

               
Cow position:
               
chr27:27020335-27019993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
57, 51
               

               
Conread position:
               
174-514
               

               
Cow position:
               
chr27:8062592-8062250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 103
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr27:1353341-1353701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr27:2592297-2592658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 351
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr27:18031310-18030949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
75, 139
               

               
Conread position:
               
175-292
               

               
Cow position:
               
chr27:23996360-23996245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
175-310
               

               
Cow position:
               
chr27:27012457-27012601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
175-331
               

               
Cow position:
               
chr27:21951219-21951055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
175-359
               

               
Cow position:
               
chr27:25790064-25790246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
175-367
               

               
Cow position:
               
chr27:17102661-17102858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
175-381
               

               
Cow position:
               
chr27:7425427-7425212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
175-414
               

               
Cow position:
               
chr27:31248845-31248610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
74, 156
               

               
Conread position:
               
175-426
               

               
Cow position:
               
chr27:11561536-11561796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
175-440
               

               
Cow position:
               
chr27:25151850-25152119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
175-482
               

               
Cow position:
               
chr27:24440456-24440150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
175-498
               

               
Cow position:
               
chr27:26643464-26643772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 30
               

               
Conread position:
               
175-508
               

               
Cow position:
               
chr27:29494137-29493808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr27:15867154-15867503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
75, 225
               

               
Conread position:
               
175-511
               

               
Cow position:
               
chr27:20101128-20101474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
175-513
               

               
Cow position:
               
chr27:2957178-2957510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
175-513
               

               
Cow position:
               
chr27:26984115-26984448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 50
               

               
Conread position:
               
175-514
               

               
Cow position:
               
chr27:19546760-19546397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
64, 170
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr27:3306547-3306881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
155, 60
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr27:12596543-12596876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 161
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr27:13875494-13875842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
68, 118
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr27:14343674-14343355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 41
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr27:22220311-22220661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 236
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr27:28190430-28190106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 67
               

               
Conread position:
               
176-310
               

               
Cow position:
               
chr27:624456-624316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr27:15865372-15865684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
73, 291
               

               
Conread position:
               
176-515
               

               
Cow position:
               
chr27:10992136-10992465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
149, 52
               

               
Conread position:
               
176-515
               

               
Cow position:
               
chr27:17472576-17472924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
176-515
               

               
Cow position:
               
chr27:30872295-30871948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
64, 105
               

               
Conread position:
               
177-303
               

               
Cow position:
               
chr27:5227551-5227427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
177-375
               

               
Cow position:
               
chr27:27648552-27648347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
177-399
               

               
Cow position:
               
chr27:30455756-30455988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
177-402
               

               
Cow position:
               
chr27:26323205-26323443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
67, 188
               

               
Conread position:
               
177-478
               

               
Cow position:
               
chr27:13411605-13411289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 115
               

               
Conread position:
               
177-513
               

               
Cow position:
               
chr27:22602938-22603280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
46, 173
               

               
Conread position:
               
177-515
               

               
Cow position:
               
chr27:29431239-29431568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
178-328
               

               
Cow position:
               
chr27:232315-232474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
178-328
               

               
Cow position:
               
chr27:26909824-26909671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
178-434
               

               
Cow position:
               
chr27:23108138-23107873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 158
               

               
Conread position:
               
180-328
               

               
Cow position:
               
chr27:1184407-1184257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
180-328
               

               
Cow position:
               
chr27:31031233-31031375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
180-389
               

               
Cow position:
               
chr27:6106473-6106684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
180-509
               

               
Cow position:
               
chr27:4858853-4858541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
180-512
               

               
Cow position:
               
chr27:8630107-8629765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
180-513
               

               
Cow position:
               
chr27:15409259-15408934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 60
               

               
Conread position:
               
180-514
               

               
Cow position:
               
chr27:26865342-26865010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 96
               

               
Conread position:
               
180-515
               

               
Cow position:
               
chr27:19589249-19589583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
134, 23
               

               
Conread position:
               
181-325
               

               
Cow position:
               
chr27:26317833-26317982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
181-468
               

               
Cow position:
               
chr27:29593861-29593569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
181-513
               

               
Cow position:
               
chr27:29380628-29380967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
182-328
               

               
Cow position:
               
chr27:22792607-22792752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
182-337
               

               
Cow position:
               
chr27:23477716-23477874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 102
               

               
Conread position:
               
182-372
               

               
Cow position:
               
chr27:19452767-19452969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
182-466
               

               
Cow position:
               
chr27:23560261-23559969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 223
               

               
Conread position:
               
182-497
               

               
Cow position:
               
chr27:21393725-21393408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
93, 55
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr27:6541403-6541740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 226
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr27:22330890-22330557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
237, 57
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr27:24446370-24446047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 68
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr27:27442392-27442059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
71, 94
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr27:28164626-28164295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
254, 216
               

               
Conread position:
               
183-328
               

               
Cow position:
               
chr27:641268-641125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
183-328
               

               
Cow position:
               
chr27:23177543-23177392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
68, 97
               

               
Conread position:
               
183-356
               

               
Cow position:
               
chr27:21025466-21025637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 8
               

               
Conread position:
               
183-358
               

               
Cow position:
               
chr27:15859528-15859344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
183-423
               

               
Cow position:
               
chr27:11994098-11993847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
183-457
               

               
Cow position:
               
chr27:23859932-23860222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 112
               

               
Conread position:
               
183-468
               

               
Cow position:
               
chr27:22489041-22489342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 175
               

               
Conread position:
               
183-503
               

               
Cow position:
               
chr27:28518062-28518389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 215
               

               
Conread position:
               
183-504
               

               
Cow position:
               
chr27:435001-435335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 75
               

               
Conread position:
               
183-506
               

               
Cow position:
               
chr27:19660697-19661042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
70, 223
               

               
Conread position:
               
183-513
               

               
Cow position:
               
chr27:26490136-26489796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
183-515
               

               
Cow position:
               
chr27:23554560-23554212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
58, 135
               

               
Conread position:
               
183-515
               

               
Cow position:
               
chr27:26424807-26424477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
184-396
               

               
Cow position:
               
chr27:6319693-6319910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
184-475
               

               
Cow position:
               
chr27:13318207-13317907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
54, 218
               

               
Conread position:
               
184-502
               

               
Cow position:
               
chr27:26188597-26188919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
67, 222
               

               
Conread position:
               
185-514
               

               
Cow position:
               
chr27:27695004-27694662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
185-515
               

               
Cow position:
               
chr27:19685939-19685601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
185-515
               

               
Cow position:
               
chr27:25411725-25411406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 14
               

               
Conread position:
               
188-515
               

               
Cow position:
               
chr27:26238798-26239136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 96
               

               
Conread position:
               
189-331
               

               
Cow position:
               
chr27:23060341-23060190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
193-376
               

               
Cow position:
               
chr27:15332509-15332324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
117, 63
               

               
Conread position:
               
193-417
               

               
Cow position:
               
chr27:28478363-28478592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
193-515
               

               
Cow position:
               
chr27:20068196-20067867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 164
               

               
Conread position:
               
196-328
               

               
Cow position:
               
chr27:23100862-23100728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
196-505
               

               
Cow position:
               
chr27:15925124-15925445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
52, 191
               

               
Conread position:
               
198-466
               

               
Cow position:
               
chr27:17646373-17646111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
128, 38
               

               
Conread position:
               
200-515
               

               
Cow position:
               
chr27:19896549-19896864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
49, 96
               

               
Conread position:
               
201-427
               

               
Cow position:
               
chr27:28242765-28242995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
202-511
               

               
Cow position:
               
chr27:24939683-24940017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 241
               

               
Conread position:
               
203-442
               

               
Cow position:
               
chr27:14303529-14303772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 136
               

               
Conread position:
               
203-515
               

               
Cow position:
               
chr27:1768833-1768516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 174
               

               
Conread position:
               
206-515
               

               
Cow position:
               
chr27:26807767-26807452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
209-505
               

               
Cow position:
               
chr27:20481561-20481276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 116
               

               
Conread position:
               
215-504
               

               
Cow position:
               
chr27:26506544-26506823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
215-515
               

               
Cow position:
               
chr27:22418963-22418657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 136
               

               
Conread position:
               
219-515
               

               
Cow position:
               
chr27:30793115-30792829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
198, 19
               

               
Conread position:
               
222-466
               

               
Cow position:
               
chr27:28260726-28260477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
223-466
               

               
Cow position:
               
chr27:20812721-20812967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
226-515
               

               
Cow position:
               
chr27:26959802-26959507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 153
               

               
Conread position:
               
230-434
               

               
Cow position:
               
chr27:18923011-18922802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 161
               

               
Conread position:
               
230-506
               

               
Cow position:
               
chr27:4386240-4385961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
232-515
               

               
Cow position:
               
chr27:4835784-4835500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
26, 208
               

               
Conread position:
               
233-428
               

               
Cow position:
               
chr27:237097-237293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
233-515
               

               
Cow position:
               
chr27:22454952-22454666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 156
               

               
Conread position:
               
234-444
               

               
Cow position:
               
chr27:4720288-4720072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
11, 154
               

               
Conread position:
               
236-503
               

               
Cow position:
               
chr27:26413425-26413154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
236-504
               

               
Cow position:
               
chr27:4819886-4819605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
236-512
               

               
Cow position:
               
chr27:27064610-27064335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
236-515
               

               
Cow position:
               
chr27:20641505-20641230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
94, 38
               

               
Conread position:
               
236-515
               

               
Cow position:
               
chr27:30359234-30359515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 161
               

               
Conread position:
               
237-328
               

               
Cow position:
               
chr27:26503029-26502938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
237-392
               

               
Cow position:
               
chr27:6674109-6674266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
237-392
               

               
Cow position:
               
chr27:12710081-12710236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
237-393
               

               
Cow position:
               
chr27:30489582-30489422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
237-397
               

               
Cow position:
               
chr27:27673187-27673024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
237-429
               

               
Cow position:
               
chr27:24305266-24305461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
237-434
               

               
Cow position:
               
chr27:1291020-1290823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
237-435
               

               
Cow position:
               
chr27:22423345-22423539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 112
               

               
Conread position:
               
237-466
               

               
Cow position:
               
chr27:6302639-6302401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
237-498
               

               
Cow position:
               
chr27:15378645-15378386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
237-499
               

               
Cow position:
               
chr27:20758199-20757957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
182, 14
               

               
Conread position:
               
237-499
               

               
Cow position:
               
chr27:23483058-23483320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 5
               

               
Conread position:
               
237-505
               

               
Cow position:
               
chr27:24371071-24371336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 65
               

               
Conread position:
               
237-505
               

               
Cow position:
               
chr27:30261066-30260791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 165
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr27:6550292-6550568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr27:7212885-7212606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 228
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr27:15643001-15643283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr27:16589874-16589605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 163
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr27:20795621-20795898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 204
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr27:22569615-22569883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr27:25276972-25277252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
237, 156
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr27:27270713-27270431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
105, 97
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr27:30988626-30988905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
14, 145
               

               
Conread position:
               
238-512
               

               
Cow position:
               
chr27:4672843-4673127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
238-513
               

               
Cow position:
               
chr27:30354511-30354234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 17
               

               
Conread position:
               
238-514
               

               
Cow position:
               
chr27:27641181-27640885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
238-515
               

               
Cow position:
               
chr27:27136691-27136408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
239-482
               

               
Cow position:
               
chr27:24738966-24738713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
239-515
               

               
Cow position:
               
chr27:20553563-20553828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
88, 133
               

               
Conread position:
               
239-522
               

               
Cow position:
               
chr27:31148592-31148878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
240-372
               

               
Cow position:
               
chr27:11466632-11466498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
240-455
               

               
Cow position:
               
chr27:18767228-18767013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
240-515
               

               
Cow position:
               
chr27:6073764-6074032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
241-511
               

               
Cow position:
               
chr27:12246487-12246765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
241-515
               

               
Cow position:
               
chr27:26581604-26581324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 111
               

               
Conread position:
               
243-428
               

               
Cow position:
               
chr27:30846491-30846681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 111
               

               
Conread position:
               
243-446
               

               
Cow position:
               
chr27:17918479-17918273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
8, 153
               

               
Conread position:
               
243-515
               

               
Cow position:
               
chr27:19717749-19718033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
243-515
               

               
Cow position:
               
chr27:23472094-23472363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
244-504
               

               
Cow position:
               
chr27:20549875-20549608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
247-422
               

               
Cow position:
               
chr27:26915592-26915409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
248-513
               

               
Cow position:
               
chr27:18593113-18593376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
173, 80
               

               
Conread position:
               
249-355
               

               
Cow position:
               
chr27:9697495-9697603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
249-397
               

               
Cow position:
               
chr27:23942988-23943139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
79, 102
               

               
Conread position:
               
249-398
               

               
Cow position:
               
chr27:22348331-22348483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
249-473
               

               
Cow position:
               
chr27:25721107-25720872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 8
               

               
Conread position:
               
249-515
               

               
Cow position:
               
chr27:23882526-23882266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
77, 60
               

               
Conread position:
               
249-515
               

               
Cow position:
               
chr27:27038996-27038728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
148, 79
               

               
Conread position:
               
251-446
               

               
Cow position:
               
chr27:31378061-31378256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 128
               

               
Conread position:
               
251-498
               

               
Cow position:
               
chr27:29312831-29312579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
72, 100
               

               
Conread position:
               
251-515
               

               
Cow position:
               
chr27:19648099-19647828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 101
               

               
Conread position:
               
252-415
               

               
Cow position:
               
chr27:22422007-22421841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 144
               

               
Conread position:
               
252-466
               

               
Cow position:
               
chr27:8405978-8405763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 99
               

               
Conread position:
               
252-502
               

               
Cow position:
               
chr27:20037270-20037028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
253-363
               

               
Cow position:
               
chr27:27531983-27532098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
253-515
               

               
Cow position:
               
chr27:1498160-1498428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 148
               

               
Conread position:
               
253-515
               

               
Cow position:
               
chr27:28245648-28245912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 153
               

               
Conread position:
               
254-470
               

               
Cow position:
               
chr27:26407313-26407099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 121
               

               
Conread position:
               
256-511
               

               
Cow position:
               
chr27:20497054-20497321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
256-515
               

               
Cow position:
               
chr27:21213636-21213882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 116
               

               
Conread position:
               
257-477
               

               
Cow position:
               
chr27:23748692-23748487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
257-515
               

               
Cow position:
               
chr27:1122881-1123142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
257-515
               

               
Cow position:
               
chr27:24321039-24321297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 45
               

               
Conread position:
               
259-515
               

               
Cow position:
               
chr27:26150869-26151131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 259
               

               
Conread position:
               
260-387
               

               
Cow position:
               
chr27:13376393-13376266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
261-515
               

               
Cow position:
               
chr27:24014886-24014629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 161
               

               
Conread position:
               
264-511
               

               
Cow position:
               
chr27:20656763-20656527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
52, 114
               

               
Conread position:
               
264-512
               

               
Cow position:
               
chr27:715357-715611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
264-515
               

               
Cow position:
               
chr27:27844146-27843885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
66, 212
               

               
Conread position:
               
270-515
               

               
Cow position:
               
chr27:4806039-4805801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
149, 64
               

               
Conread position:
               
271-515
               

               
Cow position:
               
chr27:4813020-4812769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
272-514
               

               
Cow position:
               
chr27:30550854-30551107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
277-513
               

               
Cow position:
               
chr27:16625769-16626006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 116
               

               
Conread position:
               
286-515
               

               
Cow position:
               
chr27:25379866-25380102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
27, 226
               

               
Conread position:
               
287-515
               

               
Cow position:
               
chr27:706832-707062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
289-434
               

               
Cow position:
               
chr27:21130187-21130337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
41, 132
               

               
Conread position:
               
290-516
               

               
Cow position:
               
chr27:815244-815478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 93
               

               
Conread position:
               
293-514
               

               
Cow position:
               
chr27:12429292-12429513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
295-515
               

               
Cow position:
               
chr27:3784-3995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
295-515
               

               
Cow position:
               
chr27:4829924-4829692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
302-508
               

               
Cow position:
               
chr27:30804237-30804444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
117, 91
               

               
Conread position:
               
303-515
               

               
Cow position:
               
chr27:20789484-20789266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
333-513
               

               
Cow position:
               
chr27:154291-154474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
344-515
               

               
Cow position:
               
chr27:27449495-27449322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
75, 5
               

               
Conread position:
               
351-505
               

               
Cow position:
               
chr27:16871970-16871813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 155
               

               
Conread position:
               
351-509
               

               
Cow position:
               
chr27:9697722-9697883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
356-515
               

               
Cow position:
               
chr27:30844127-30843964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               
Show alignments to all cow chromosomes.