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Cow genome map

           
Conread name:
           
Ova1-OVRM10096D07
        

               
Conread position:
               
90-515
               

               
Cow position:
               
chr4:1985918-1985481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
106-417
               

               
Cow position:
               
chr4:49800947-49800632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
110-515
               

               
Cow position:
               
chr4:43515976-43515564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
5, 58
               

               
Conread position:
               
125-477
               

               
Cow position:
               
chr4:34699807-34700162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
128-310
               

               
Cow position:
               
chr4:26549935-26549754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
129-515
               

               
Cow position:
               
chr4:12004452-12004058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
133-328
               

               
Cow position:
               
chr4:56395745-56395541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
135-344
               

               
Cow position:
               
chr4:60302789-60302992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
135-417
               

               
Cow position:
               
chr4:17851033-17851314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
135-505
               

               
Cow position:
               
chr4:8412900-8413270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
139-295
               

               
Cow position:
               
chr4:64488773-64488621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 42
               

               
Conread position:
               
140-328
               

               
Cow position:
               
chr4:61969509-61969697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 32
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr4:52780064-52779716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
142-377
               

               
Cow position:
               
chr4:33838583-33838823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
142-390
               

               
Cow position:
               
chr4:26959748-26960005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
142-447
               

               
Cow position:
               
chr4:19573504-19573193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
142-515
               

               
Cow position:
               
chr4:18974647-18974269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 141
               

               
Conread position:
               
143-469
               

               
Cow position:
               
chr4:38156877-38157207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
143-515
               

               
Cow position:
               
chr4:20327505-20327872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
144-335
               

               
Cow position:
               
chr4:47230777-47230979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
145-513
               

               
Cow position:
               
chr4:29805151-29805530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 194
               

               
Conread position:
               
145-515
               

               
Cow position:
               
chr4:25356114-25356464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 15
               

               
Conread position:
               
145-515
               

               
Cow position:
               
chr4:30574678-30574289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
147-294
               

               
Cow position:
               
chr4:49338253-49338104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
147-328
               

               
Cow position:
               
chr4:11186180-11185992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
147-385
               

               
Cow position:
               
chr4:6093852-6094097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
147-503
               

               
Cow position:
               
chr4:14542456-14542829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
148-500
               

               
Cow position:
               
chr4:656594-656963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
149-331
               

               
Cow position:
               
chr4:30769246-30769061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
150-330
               

               
Cow position:
               
chr4:17076065-17076252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
98, 141
               

               
Conread position:
               
150-407
               

               
Cow position:
               
chr4:60363563-60363295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 32
               

               
Conread position:
               
150-450
               

               
Cow position:
               
chr4:19292928-19292624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
150-477
               

               
Cow position:
               
chr4:25227145-25226827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
169, 21
               

               
Conread position:
               
150-511
               

               
Cow position:
               
chr4:68076326-68076688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
150-515
               

               
Cow position:
               
chr4:4186329-4185962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
150-515
               

               
Cow position:
               
chr4:31136968-31136589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 200
               

               
Conread position:
               
151-325
               

               
Cow position:
               
chr4:30250071-30250239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
151-328
               

               
Cow position:
               
chr4:65291652-65291827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
151-464
               

               
Cow position:
               
chr4:26332990-26333307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
102, 5
               

               
Conread position:
               
151-464
               

               
Cow position:
               
chr4:26335157-26335474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
102, 5
               

               
Conread position:
               
151-500
               

               
Cow position:
               
chr4:20124757-20125137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
98, 201
               

               
Conread position:
               
152-332
               

               
Cow position:
               
chr4:44927336-44927514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
152-382
               

               
Cow position:
               
chr4:19333594-19333358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
152-469
               

               
Cow position:
               
chr4:12901343-12901670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 249
               

               
Conread position:
               
152-501
               

               
Cow position:
               
chr4:29107123-29106755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 141
               

               
Conread position:
               
153-313
               

               
Cow position:
               
chr4:12920542-12920376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 56
               

               
Conread position:
               
153-313
               

               
Cow position:
               
chr4:42608948-42608782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
153-388
               

               
Cow position:
               
chr4:40995944-40995697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 200
               

               
Conread position:
               
153-389
               

               
Cow position:
               
chr4:5728040-5727809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
158, 88
               

               
Conread position:
               
153-495
               

               
Cow position:
               
chr4:61388859-61389216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
154-328
               

               
Cow position:
               
chr4:63261681-63261499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
154-513
               

               
Cow position:
               
chr4:68806211-68805871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
172, 87
               

               
Conread position:
               
154-515
               

               
Cow position:
               
chr4:19238425-19238077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
95, 12
               

               
Conread position:
               
154-515
               

               
Cow position:
               
chr4:21065233-21064876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
154-515
               

               
Cow position:
               
chr4:52748253-52748620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
155-314
               

               
Cow position:
               
chr4:46176088-46176256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 128
               

               
Conread position:
               
155-325
               

               
Cow position:
               
chr4:48046207-48046376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
155-328
               

               
Cow position:
               
chr4:5790852-5790671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
155-379
               

               
Cow position:
               
chr4:21506760-21506981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
155-394
               

               
Cow position:
               
chr4:21161311-21161063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
155-396
               

               
Cow position:
               
chr4:45874256-45874509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
155-468
               

               
Cow position:
               
chr4:214218-213904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
155-492
               

               
Cow position:
               
chr4:7964440-7964795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 200
               

               
Conread position:
               
155-515
               

               
Cow position:
               
chr4:33096763-33097138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 129
               

               
Conread position:
               
156-328
               

               
Cow position:
               
chr4:30944159-30943983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
156-328
               

               
Cow position:
               
chr4:42044769-42044946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
156-332
               

               
Cow position:
               
chr4:56853060-56852872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
156-396
               

               
Cow position:
               
chr4:59001932-59002181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
156-437
               

               
Cow position:
               
chr4:37991794-37991515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
156-439
               

               
Cow position:
               
chr4:69290536-69290824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
156-481
               

               
Cow position:
               
chr4:1419430-1419094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 76
               

               
Conread position:
               
156-492
               

               
Cow position:
               
chr4:68430355-68430005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
21, 248
               

               
Conread position:
               
156-503
               

               
Cow position:
               
chr4:23450884-23451248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 250
               

               
Conread position:
               
156-505
               

               
Cow position:
               
chr4:19119224-19118854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
156-505
               

               
Cow position:
               
chr4:58248611-58248252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 181
               

               
Conread position:
               
156-513
               

               
Cow position:
               
chr4:10412557-10412218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
142, 41
               

               
Conread position:
               
156-513
               

               
Cow position:
               
chr4:36290827-36290468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
156-514
               

               
Cow position:
               
chr4:37915132-37915499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 191
               

               
Conread position:
               
156-515
               

               
Cow position:
               
chr4:23646666-23647005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
263, 15
               

               
Conread position:
               
156-515
               

               
Cow position:
               
chr4:35982203-35981831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
156-515
               

               
Cow position:
               
chr4:41867653-41867282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
156-515
               

               
Cow position:
               
chr4:45685660-45685306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 179
               

               
Conread position:
               
157-298
               

               
Cow position:
               
chr4:19328786-19328643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
157-456
               

               
Cow position:
               
chr4:45837424-45837734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 68
               

               
Conread position:
               
157-461
               

               
Cow position:
               
chr4:2774929-2774609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 250
               

               
Conread position:
               
157-515
               

               
Cow position:
               
chr4:63731-64101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
160-328
               

               
Cow position:
               
chr4:23059650-23059827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
160-387
               

               
Cow position:
               
chr4:15236824-15236603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
193, 8
               

               
Conread position:
               
160-390
               

               
Cow position:
               
chr4:45706239-45706007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
160-515
               

               
Cow position:
               
chr4:27530314-27529955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
160-515
               

               
Cow position:
               
chr4:66547562-66547929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
161-515
               

               
Cow position:
               
chr4:56570992-56570646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
158, 77
               

               
Conread position:
               
162-412
               

               
Cow position:
               
chr4:20141788-20142023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr4:32789817-32790012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
165, 41
               

               
Conread position:
               
163-396
               

               
Cow position:
               
chr4:69169848-69169604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
65, 229
               

               
Conread position:
               
163-397
               

               
Cow position:
               
chr4:3268171-3268406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
163-397
               

               
Cow position:
               
chr4:13131681-13131430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
163-515
               

               
Cow position:
               
chr4:38944059-38944423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 182
               

               
Conread position:
               
163-515
               

               
Cow position:
               
chr4:53134796-53134444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 86
               

               
Conread position:
               
164-515
               

               
Cow position:
               
chr4:36929495-36929155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
165-391
               

               
Cow position:
               
chr4:43542285-43542508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
90, 122
               

               
Conread position:
               
166-324
               

               
Cow position:
               
chr4:19330575-19330736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
166-515
               

               
Cow position:
               
chr4:34337075-34337429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
167-515
               

               
Cow position:
               
chr4:65825629-65826013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
170-515
               

               
Cow position:
               
chr4:19709135-19708779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 268
               

               
Conread position:
               
170-515
               

               
Cow position:
               
chr4:21531447-21531806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
171-291
               

               
Cow position:
               
chr4:61193153-61193274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
171-327
               

               
Cow position:
               
chr4:61524621-61524462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
171-328
               

               
Cow position:
               
chr4:2628721-2628557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
171-328
               

               
Cow position:
               
chr4:12713841-12713998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
171-330
               

               
Cow position:
               
chr4:20153363-20153522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
78, 34
               

               
Conread position:
               
171-402
               

               
Cow position:
               
chr4:12442100-12441847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 144
               

               
Conread position:
               
171-402
               

               
Cow position:
               
chr4:13241830-13241577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
61, 144
               

               
Conread position:
               
171-417
               

               
Cow position:
               
chr4:36517308-36517547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
220, 80
               

               
Conread position:
               
171-470
               

               
Cow position:
               
chr4:45725055-45724759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 133
               

               
Conread position:
               
171-500
               

               
Cow position:
               
chr4:60897103-60897423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
182, 11
               

               
Conread position:
               
171-505
               

               
Cow position:
               
chr4:12127448-12127794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
79, 261
               

               
Conread position:
               
171-506
               

               
Cow position:
               
chr4:23846863-23847201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 102
               

               
Conread position:
               
171-506
               

               
Cow position:
               
chr4:45250164-45249823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
171-509
               

               
Cow position:
               
chr4:62472267-62471916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
171-514
               

               
Cow position:
               
chr4:62317638-62317283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr4:961474-961826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
154, 66
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr4:2099823-2099471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr4:3341146-3340789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr4:4318963-4319307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 223
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr4:9444491-9444849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
75, 235
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr4:21259396-21259054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
100, 71
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr4:22713304-22713653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr4:36841452-36841121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr4:46258686-46258323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
69, 162
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr4:47731055-47730696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 289
               

               
Conread position:
               
171-515
               

               
Cow position:
               
chr4:48486187-48485842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 267
               

               
Conread position:
               
172-282
               

               
Cow position:
               
chr4:45387010-45386896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
172-283
               

               
Cow position:
               
chr4:22701622-22701736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
172-287
               

               
Cow position:
               
chr4:6202213-6202334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
172-293
               

               
Cow position:
               
chr4:26306283-26306401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
172-298
               

               
Cow position:
               
chr4:29206715-29206591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
172-299
               

               
Cow position:
               
chr4:63183494-63183624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
172-300
               

               
Cow position:
               
chr4:57556669-57556543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
172-301
               

               
Cow position:
               
chr4:12666221-12666086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
172-302
               

               
Cow position:
               
chr4:19090077-19089952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
172-302
               

               
Cow position:
               
chr4:34544495-34544361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
172-308
               

               
Cow position:
               
chr4:49880515-49880646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
172-309
               

               
Cow position:
               
chr4:68358516-68358378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
172-310
               

               
Cow position:
               
chr4:7816491-7816339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
172-310
               

               
Cow position:
               
chr4:10785950-10786093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 119
               

               
Conread position:
               
172-310
               

               
Cow position:
               
chr4:19496789-19496939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
172-310
               

               
Cow position:
               
chr4:19504112-19503975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
172-313
               

               
Cow position:
               
chr4:12867290-12867147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-313
               

               
Cow position:
               
chr4:14131614-14131471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
172-313
               

               
Cow position:
               
chr4:19463738-19463588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
172-313
               

               
Cow position:
               
chr4:69478418-69478283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
172-314
               

               
Cow position:
               
chr4:35939552-35939692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 77
               

               
Conread position:
               
172-320
               

               
Cow position:
               
chr4:8675557-8675406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
74, 147
               

               
Conread position:
               
172-320
               

               
Cow position:
               
chr4:36876666-36876821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
50, 136
               

               
Conread position:
               
172-321
               

               
Cow position:
               
chr4:66509816-66509673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
172-324
               

               
Cow position:
               
chr4:6072861-6073022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-324
               

               
Cow position:
               
chr4:56746184-56746022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 112
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr4:10410953-10410809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr4:16636886-16637043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr4:19200296-19200144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
172-325
               

               
Cow position:
               
chr4:59105495-59105650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 151
               

               
Conread position:
               
172-326
               

               
Cow position:
               
chr4:299340-299180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 138
               

               
Conread position:
               
172-326
               

               
Cow position:
               
chr4:14063106-14063253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
172-326
               

               
Cow position:
               
chr4:45840582-45840429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-327
               

               
Cow position:
               
chr4:51617806-51617969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:348242-348396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:2537459-2537306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
147, 81
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:2713667-2713831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:3299608-3299762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:5250381-5250216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:8083618-8083769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:12052147-12052300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 97
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:19420565-19420728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:20164507-20164664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 125
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:21128312-21128164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:28660356-28660522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:34919084-34919241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
78, 134
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:46234972-46235131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
75, 130
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:54785740-54785900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:56410535-56410374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:57566504-57566660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:58045442-58045606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
74, 160
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:59015770-59015617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:60955511-60955356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
172-328
               

               
Cow position:
               
chr4:61286727-61286573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
131, 33
               

               
Conread position:
               
172-329
               

               
Cow position:
               
chr4:45964080-45963911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-329
               

               
Cow position:
               
chr4:49808708-49808547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
172-329
               

               
Cow position:
               
chr4:56307992-56307830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
172-330
               

               
Cow position:
               
chr4:42347677-42347512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
76, 158
               

               
Conread position:
               
172-331
               

               
Cow position:
               
chr4:59608006-59608159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-332
               

               
Cow position:
               
chr4:2770261-2770098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-332
               

               
Cow position:
               
chr4:12908559-12908399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
79, 152
               

               
Conread position:
               
172-332
               

               
Cow position:
               
chr4:23271474-23271307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
172-333
               

               
Cow position:
               
chr4:19558857-19558710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
172-334
               

               
Cow position:
               
chr4:36545087-36545254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
52, 101
               

               
Conread position:
               
172-335
               

               
Cow position:
               
chr4:47283821-47283994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
172-336
               

               
Cow position:
               
chr4:40393001-40392837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
73, 112
               

               
Conread position:
               
172-337
               

               
Cow position:
               
chr4:13508049-13508220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
73, 163
               

               
Conread position:
               
172-342
               

               
Cow position:
               
chr4:69458386-69458212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
172-346
               

               
Cow position:
               
chr4:3519609-3519429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
172-347
               

               
Cow position:
               
chr4:47048304-47048124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
172-347
               

               
Cow position:
               
chr4:51083150-51083331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
172-355
               

               
Cow position:
               
chr4:61887831-61887635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
172-358
               

               
Cow position:
               
chr4:13194147-13193964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
172-361
               

               
Cow position:
               
chr4:30691192-30690999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 183
               

               
Conread position:
               
172-368
               

               
Cow position:
               
chr4:61268368-61268177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
154, 31
               

               
Conread position:
               
172-372
               

               
Cow position:
               
chr4:18098871-18099080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
172-372
               

               
Cow position:
               
chr4:69305825-69305609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
172-373
               

               
Cow position:
               
chr4:43916483-43916269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
172-373
               

               
Cow position:
               
chr4:60527371-60527161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
172-373
               

               
Cow position:
               
chr4:61391045-61391245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
151, 10
               

               
Conread position:
               
172-376
               

               
Cow position:
               
chr4:4150229-4150032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
172-376
               

               
Cow position:
               
chr4:19539042-19539259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
172-378
               

               
Cow position:
               
chr4:617187-617401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
76, 111
               

               
Conread position:
               
172-383
               

               
Cow position:
               
chr4:45588241-45588466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
172-386
               

               
Cow position:
               
chr4:46404721-46404936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
172-387
               

               
Cow position:
               
chr4:64029283-64029085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
172-388
               

               
Cow position:
               
chr4:17051094-17051321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
172-389
               

               
Cow position:
               
chr4:44854097-44854325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 205
               

               
Conread position:
               
172-389
               

               
Cow position:
               
chr4:50687675-50687896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
68, 128
               

               
Conread position:
               
172-389
               

               
Cow position:
               
chr4:58018532-58018309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
172-390
               

               
Cow position:
               
chr4:13142393-13142599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
172-391
               

               
Cow position:
               
chr4:10558726-10558497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
172-391
               

               
Cow position:
               
chr4:31178012-31177789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
77, 200
               

               
Conread position:
               
172-395
               

               
Cow position:
               
chr4:46883477-46883715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
172-396
               

               
Cow position:
               
chr4:3853669-3853430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 219
               

               
Conread position:
               
172-396
               

               
Cow position:
               
chr4:21088678-21088918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
172-396
               

               
Cow position:
               
chr4:46049827-46050042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
5, 59
               

               
Conread position:
               
172-397
               

               
Cow position:
               
chr4:10962394-10962611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
85, 109
               

               
Conread position:
               
172-398
               

               
Cow position:
               
chr4:54390824-54391061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 111
               

               
Conread position:
               
172-398
               

               
Cow position:
               
chr4:68590959-68590733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
172-399
               

               
Cow position:
               
chr4:35638716-35638948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
172-401
               

               
Cow position:
               
chr4:16221681-16221921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
36, 31
               

               
Conread position:
               
172-406
               

               
Cow position:
               
chr4:19431500-19431748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
172-407
               

               
Cow position:
               
chr4:65173292-65173049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
172-408
               

               
Cow position:
               
chr4:47305271-47305025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
73, 233
               

               
Conread position:
               
172-417
               

               
Cow position:
               
chr4:28701535-28701293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
150, 31
               

               
Conread position:
               
172-425
               

               
Cow position:
               
chr4:68456726-68456989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
172-427
               

               
Cow position:
               
chr4:34510019-34509766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 30
               

               
Conread position:
               
172-428
               

               
Cow position:
               
chr4:46435524-46435249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
172-428
               

               
Cow position:
               
chr4:65548842-65549106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
48, 110
               

               
Conread position:
               
172-431
               

               
Cow position:
               
chr4:47748604-47748340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
76, 155
               

               
Conread position:
               
172-437
               

               
Cow position:
               
chr4:46566281-46566556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
172-439
               

               
Cow position:
               
chr4:38822128-38822402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
172-446
               

               
Cow position:
               
chr4:60719282-60719008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 33
               

               
Conread position:
               
172-447
               

               
Cow position:
               
chr4:20142721-20143002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
33, 137
               

               
Conread position:
               
172-448
               

               
Cow position:
               
chr4:44903474-44903193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
203, 54
               

               
Conread position:
               
172-455
               

               
Cow position:
               
chr4:63951974-63952266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 115
               

               
Conread position:
               
172-455
               

               
Cow position:
               
chr4:69455438-69455727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
34, 183
               

               
Conread position:
               
172-460
               

               
Cow position:
               
chr4:46136939-46136644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
172-461
               

               
Cow position:
               
chr4:11611054-11610768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
68, 58
               

               
Conread position:
               
172-466
               

               
Cow position:
               
chr4:22546653-22546951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 123
               

               
Conread position:
               
172-468
               

               
Cow position:
               
chr4:16513338-16513635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
172-471
               

               
Cow position:
               
chr4:37732289-37732601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 240
               

               
Conread position:
               
172-472
               

               
Cow position:
               
chr4:22071482-22071766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
172-477
               

               
Cow position:
               
chr4:4084918-4085246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 230
               

               
Conread position:
               
172-477
               

               
Cow position:
               
chr4:5913174-5913472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
172-477
               

               
Cow position:
               
chr4:19578573-19578279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
172-477
               

               
Cow position:
               
chr4:50194883-50194574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
66, 110
               

               
Conread position:
               
172-477
               

               
Cow position:
               
chr4:65463323-65463609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 169
               

               
Conread position:
               
172-478
               

               
Cow position:
               
chr4:13026484-13026175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
172-479
               

               
Cow position:
               
chr4:45636362-45636037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 230
               

               
Conread position:
               
172-482
               

               
Cow position:
               
chr4:38946409-38946079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
172-485
               

               
Cow position:
               
chr4:7043627-7043955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 158
               

               
Conread position:
               
172-487
               

               
Cow position:
               
chr4:14504858-14505150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
172-489
               

               
Cow position:
               
chr4:12474041-12473715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
73, 143
               

               
Conread position:
               
172-496
               

               
Cow position:
               
chr4:20184873-20184570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 28
               

               
Conread position:
               
172-498
               

               
Cow position:
               
chr4:85884-85545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 277
               

               
Conread position:
               
172-498
               

               
Cow position:
               
chr4:18756627-18756288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
172-499
               

               
Cow position:
               
chr4:3688119-3687777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 231
               

               
Conread position:
               
172-503
               

               
Cow position:
               
chr4:15871551-15871872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
153, 74
               

               
Conread position:
               
172-503
               

               
Cow position:
               
chr4:22236295-22236631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
172-503
               

               
Cow position:
               
chr4:37935112-37935434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
157, 30
               

               
Conread position:
               
172-503
               

               
Cow position:
               
chr4:49158602-49158935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 153
               

               
Conread position:
               
172-504
               

               
Cow position:
               
chr4:12591030-12591365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
172-504
               

               
Cow position:
               
chr4:31348010-31348341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
157, 66
               

               
Conread position:
               
172-504
               

               
Cow position:
               
chr4:45076889-45077225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 226
               

               
Conread position:
               
172-504
               

               
Cow position:
               
chr4:52823212-52823556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
78, 233
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr4:9925449-9925784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr4:12676985-12676652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 149
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr4:34631097-34630742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 316
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr4:44496552-44496227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
158, 69
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr4:45662326-45662660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
29, 128
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr4:59871670-59871333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
74, 10
               

               
Conread position:
               
172-506
               

               
Cow position:
               
chr4:54767200-54767542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
137, 65
               

               
Conread position:
               
172-508
               

               
Cow position:
               
chr4:54111913-54111592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr4:3388732-3388388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr4:19745060-19744729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr4:24810261-24810597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 199
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr4:31023639-31023289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 112
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr4:34310275-34310607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
172-509
               

               
Cow position:
               
chr4:45582932-45583279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
172-511
               

               
Cow position:
               
chr4:4084266-4084607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 68
               

               
Conread position:
               
172-512
               

               
Cow position:
               
chr4:13693484-13693833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
172-512
               

               
Cow position:
               
chr4:47262727-47262373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
73, 185
               

               
Conread position:
               
172-512
               

               
Cow position:
               
chr4:49629676-49629324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 237
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr4:12031039-12030686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 209
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr4:12049414-12049085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 26
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr4:13284574-13284220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 143
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr4:41370751-41371100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 218
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr4:51728264-51727916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 221
               

               
Conread position:
               
172-513
               

               
Cow position:
               
chr4:65919808-65919453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 234
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr4:62983368-62983711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 157
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:202953-203304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:275634-275301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 81
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:1015261-1014905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:7430493-7430161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 14
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:8801679-8801341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
124, 69
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:10968207-10968547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:11099471-11099831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:12561209-12560868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
158, 60
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:13344726-13344384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 253
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:14414164-14414508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
247, 35
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:15439776-15439417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
73, 215
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:16762529-16762890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
36, 238
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:17774175-17774516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 51
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:19435439-19435098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:20147375-20147023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 228
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:22073127-22073478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
65, 165
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:22138026-22138394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:22860537-22860874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
177, 69
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:25197300-25197656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
73, 225
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:26659490-26659142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 208
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:28771880-28772229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:29291696-29291357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 83
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:30974524-30974178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 85
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:31505828-31506194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
69, 191
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:33970715-33971057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 8
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:34369275-34369615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:34641533-34641888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 116
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:37691121-37691475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:44613195-44612840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 173
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:46061138-46060783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
77, 230
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:48322227-48321862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
67, 269
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:49794840-49794512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:51769295-51768950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:51851403-51851039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 237
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:51899211-51898845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 211
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:54938070-54937728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
155, 35
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:61897362-61897698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 32
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:64792020-64791711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr4:68387979-68387629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 178
               

               
Conread position:
               
173-310
               

               
Cow position:
               
chr4:14965004-14964875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
173-318
               

               
Cow position:
               
chr4:62820867-62821017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
173-325
               

               
Cow position:
               
chr4:43909954-43909793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
173-326
               

               
Cow position:
               
chr4:66168149-66168301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
173-328
               

               
Cow position:
               
chr4:23984929-23985096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
173-331
               

               
Cow position:
               
chr4:55694359-55694197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
173-335
               

               
Cow position:
               
chr4:30648036-30647877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
173-338
               

               
Cow position:
               
chr4:27657161-27656993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
173-339
               

               
Cow position:
               
chr4:33360282-33360119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
152, 67
               

               
Conread position:
               
173-345
               

               
Cow position:
               
chr4:35291212-35291029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
173-347
               

               
Cow position:
               
chr4:39864609-39864446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
157, 48
               

               
Conread position:
               
173-357
               

               
Cow position:
               
chr4:25541-25724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 144
               

               
Conread position:
               
173-361
               

               
Cow position:
               
chr4:42373966-42374164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
173-369
               

               
Cow position:
               
chr4:41907393-41907597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
76, 176
               

               
Conread position:
               
173-372
               

               
Cow position:
               
chr4:49212560-49212758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
173-373
               

               
Cow position:
               
chr4:46560368-46560161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 129
               

               
Conread position:
               
173-389
               

               
Cow position:
               
chr4:32562021-32561794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 94
               

               
Conread position:
               
173-411
               

               
Cow position:
               
chr4:38699986-38700214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
156, 66
               

               
Conread position:
               
173-429
               

               
Cow position:
               
chr4:8182445-8182714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
173-459
               

               
Cow position:
               
chr4:24092942-24093246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 110
               

               
Conread position:
               
173-502
               

               
Cow position:
               
chr4:48409096-48409415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 78
               

               
Conread position:
               
173-509
               

               
Cow position:
               
chr4:48104376-48104729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
66, 227
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr4:10915643-10915999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 46
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr4:16881184-16881525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
156, 29
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr4:17186159-17186515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 171
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr4:23444849-23445215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
74, 127
               

               
Conread position:
               
174-320
               

               
Cow position:
               
chr4:45212998-45213150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
72, 53
               

               
Conread position:
               
174-326
               

               
Cow position:
               
chr4:46656322-46656160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
174-328
               

               
Cow position:
               
chr4:66122181-66122338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
174-331
               

               
Cow position:
               
chr4:17790108-17790266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
174-331
               

               
Cow position:
               
chr4:22482508-22482351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
174-331
               

               
Cow position:
               
chr4:23943455-23943619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
174-332
               

               
Cow position:
               
chr4:39569385-39569228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr4:22215325-22215490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 157
               

               
Conread position:
               
174-345
               

               
Cow position:
               
chr4:53347793-53347961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
70, 51
               

               
Conread position:
               
174-374
               

               
Cow position:
               
chr4:61608780-61608985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
174-385
               

               
Cow position:
               
chr4:39007685-39007477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
174-390
               

               
Cow position:
               
chr4:21112385-21112603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 134
               

               
Conread position:
               
174-391
               

               
Cow position:
               
chr4:7698453-7698229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 145
               

               
Conread position:
               
174-394
               

               
Cow position:
               
chr4:67393283-67393054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
73, 210
               

               
Conread position:
               
174-423
               

               
Cow position:
               
chr4:47038957-47038698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 185
               

               
Conread position:
               
174-427
               

               
Cow position:
               
chr4:19199095-19199363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
72, 182
               

               
Conread position:
               
174-477
               

               
Cow position:
               
chr4:59873614-59873307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
75, 100
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr4:46383177-46383503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 185
               

               
Conread position:
               
174-503
               

               
Cow position:
               
chr4:27632629-27632300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
174-503
               

               
Cow position:
               
chr4:56239676-56240000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
174-505
               

               
Cow position:
               
chr4:570976-570641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
174-505
               

               
Cow position:
               
chr4:22101073-22101412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 113
               

               
Conread position:
               
174-505
               

               
Cow position:
               
chr4:32458668-32459017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
174-506
               

               
Cow position:
               
chr4:11897114-11897448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
66, 148
               

               
Conread position:
               
174-507
               

               
Cow position:
               
chr4:34022398-34022741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
174-513
               

               
Cow position:
               
chr4:13668430-13668788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
70, 184
               

               
Conread position:
               
174-513
               

               
Cow position:
               
chr4:64191992-64192351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
77, 144
               

               
Conread position:
               
174-513
               

               
Cow position:
               
chr4:68569456-68569813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 109
               

               
Conread position:
               
174-514
               

               
Cow position:
               
chr4:56591230-56590874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 158
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr4:3283266-3283606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr4:19584902-19584546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 175
               

               
Conread position:
               
175-310
               

               
Cow position:
               
chr4:44024352-44024496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
72, 121
               

               
Conread position:
               
175-320
               

               
Cow position:
               
chr4:48693782-48693635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
175-320
               

               
Cow position:
               
chr4:63293645-63293496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 104
               

               
Conread position:
               
175-325
               

               
Cow position:
               
chr4:12748234-12748381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
175-327
               

               
Cow position:
               
chr4:38940755-38940913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
66, 105
               

               
Conread position:
               
175-327
               

               
Cow position:
               
chr4:46494488-46494333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
175-327
               

               
Cow position:
               
chr4:66412370-66412216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
175-328
               

               
Cow position:
               
chr4:22849315-22849462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
175-328
               

               
Cow position:
               
chr4:34722697-34722858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 154
               

               
Conread position:
               
175-328
               

               
Cow position:
               
chr4:42080518-42080673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
175-328
               

               
Cow position:
               
chr4:43579229-43579384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
175-331
               

               
Cow position:
               
chr4:25802881-25802716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
175-331
               

               
Cow position:
               
chr4:50131709-50131542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
175-334
               

               
Cow position:
               
chr4:22331307-22331144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
175-335
               

               
Cow position:
               
chr4:9269711-9269868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 75
               

               
Conread position:
               
175-335
               

               
Cow position:
               
chr4:29843006-29842845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
73, 82
               

               
Conread position:
               
175-338
               

               
Cow position:
               
chr4:51026538-51026367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
175-345
               

               
Cow position:
               
chr4:28854089-28854263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
175-346
               

               
Cow position:
               
chr4:21275426-21275593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
148, 27
               

               
Conread position:
               
175-351
               

               
Cow position:
               
chr4:59755464-59755643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
175-357
               

               
Cow position:
               
chr4:32602013-32601834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
175-361
               

               
Cow position:
               
chr4:561818-561625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 95
               

               
Conread position:
               
175-368
               

               
Cow position:
               
chr4:19496687-19496480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
68, 185
               

               
Conread position:
               
175-385
               

               
Cow position:
               
chr4:12048065-12047841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
175-385
               

               
Cow position:
               
chr4:69497300-69497086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
175-388
               

               
Cow position:
               
chr4:14020686-14020466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
175-395
               

               
Cow position:
               
chr4:11969641-11969415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
175-402
               

               
Cow position:
               
chr4:62370496-62370268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 94
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr4:42231846-42232072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 49
               

               
Conread position:
               
175-408
               

               
Cow position:
               
chr4:38209788-38210030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
175-417
               

               
Cow position:
               
chr4:26012599-26012335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 145
               

               
Conread position:
               
175-434
               

               
Cow position:
               
chr4:19102689-19102964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
69, 205
               

               
Conread position:
               
175-435
               

               
Cow position:
               
chr4:26830905-26830622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 145
               

               
Conread position:
               
175-477
               

               
Cow position:
               
chr4:13221993-13222306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 218
               

               
Conread position:
               
175-478
               

               
Cow position:
               
chr4:53126284-53125993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
241, 28
               

               
Conread position:
               
175-482
               

               
Cow position:
               
chr4:52831828-52832147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 176
               

               
Conread position:
               
175-491
               

               
Cow position:
               
chr4:21874365-21874036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
175-491
               

               
Cow position:
               
chr4:46527191-46526858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
72, 196
               

               
Conread position:
               
175-492
               

               
Cow position:
               
chr4:54871836-54872166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 108
               

               
Conread position:
               
175-493
               

               
Cow position:
               
chr4:16238982-16239291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
74, 150
               

               
Conread position:
               
175-499
               

               
Cow position:
               
chr4:54927243-54927586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 189
               

               
Conread position:
               
175-504
               

               
Cow position:
               
chr4:54455159-54455494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
175-505
               

               
Cow position:
               
chr4:27276358-27276698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
175-505
               

               
Cow position:
               
chr4:29384054-29384374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 76
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr4:22009875-22010217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr4:25370281-25369965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
244, 61
               

               
Conread position:
               
175-513
               

               
Cow position:
               
chr4:19500901-19501244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr4:508725-509065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr4:2885359-2885706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
154, 74
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr4:3421811-3421465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 219
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr4:3837455-3837121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
118, 52
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr4:19315820-19316163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 221
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr4:19597145-19597478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 67
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr4:21391632-21391975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr4:28839797-28839463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 74
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr4:59277287-59277638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 236
               

               
Conread position:
               
175-515
               

               
Cow position:
               
chr4:68234150-68233814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
175-516
               

               
Cow position:
               
chr4:38935545-38935193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
176-302
               

               
Cow position:
               
chr4:8388893-8389027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
62, 55
               

               
Conread position:
               
176-320
               

               
Cow position:
               
chr4:61999012-61999161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
176-373
               

               
Cow position:
               
chr4:13919165-13918962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
176-376
               

               
Cow position:
               
chr4:4295764-4295564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
150, 29
               

               
Conread position:
               
176-445
               

               
Cow position:
               
chr4:66380150-66380431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 165
               

               
Conread position:
               
176-448
               

               
Cow position:
               
chr4:44183934-44184206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
82, 50
               

               
Conread position:
               
176-499
               

               
Cow position:
               
chr4:19407805-19408146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 139
               

               
Conread position:
               
176-505
               

               
Cow position:
               
chr4:13590273-13589935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 219
               

               
Conread position:
               
176-515
               

               
Cow position:
               
chr4:1026052-1026387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
176-515
               

               
Cow position:
               
chr4:19700293-19699944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 235
               

               
Conread position:
               
176-515
               

               
Cow position:
               
chr4:23509777-23509430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
176-515
               

               
Cow position:
               
chr4:40414441-40414790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 237
               

               
Conread position:
               
177-307
               

               
Cow position:
               
chr4:51867384-51867253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
177-328
               

               
Cow position:
               
chr4:25929394-25929245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
177-389
               

               
Cow position:
               
chr4:48381575-48381346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
177-402
               

               
Cow position:
               
chr4:18952163-18951925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
177-482
               

               
Cow position:
               
chr4:55508076-55508369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
177-505
               

               
Cow position:
               
chr4:7704131-7704473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
177-509
               

               
Cow position:
               
chr4:66172610-66172954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 279
               

               
Conread position:
               
177-515
               

               
Cow position:
               
chr4:37343305-37342949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
177-515
               

               
Cow position:
               
chr4:48152187-48152526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
177-515
               

               
Cow position:
               
chr4:53208468-53208133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 65
               

               
Conread position:
               
178-347
               

               
Cow position:
               
chr4:19123054-19122879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
178-477
               

               
Cow position:
               
chr4:14500063-14500377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
178-515
               

               
Cow position:
               
chr4:46550573-46550226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
180-307
               

               
Cow position:
               
chr4:12245393-12245259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
180-328
               

               
Cow position:
               
chr4:27511730-27511573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 103
               

               
Conread position:
               
180-328
               

               
Cow position:
               
chr4:44681078-44681223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
180-331
               

               
Cow position:
               
chr4:36070884-36070728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
180-389
               

               
Cow position:
               
chr4:386212-386427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
66, 106
               

               
Conread position:
               
180-422
               

               
Cow position:
               
chr4:69317610-69317367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
150, 66
               

               
Conread position:
               
180-452
               

               
Cow position:
               
chr4:32693970-32693685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
180-500
               

               
Cow position:
               
chr4:20026923-20027248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 101
               

               
Conread position:
               
180-514
               

               
Cow position:
               
chr4:4320811-4321163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 213
               

               
Conread position:
               
180-515
               

               
Cow position:
               
chr4:11187634-11187291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 83
               

               
Conread position:
               
180-552
               

               
Cow position:
               
chr4:33100625-33101016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 46
               

               
Conread position:
               
181-388
               

               
Cow position:
               
chr4:34653694-34653903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
144, 91
               

               
Conread position:
               
181-515
               

               
Cow position:
               
chr4:10999526-10999866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 204
               

               
Conread position:
               
181-515
               

               
Cow position:
               
chr4:27344501-27344833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 238
               

               
Conread position:
               
181-515
               

               
Cow position:
               
chr4:59785501-59785155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
181-515
               

               
Cow position:
               
chr4:68764700-68764353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
182-317
               

               
Cow position:
               
chr4:972602-972742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 127
               

               
Conread position:
               
182-331
               

               
Cow position:
               
chr4:68777120-68776961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 100
               

               
Conread position:
               
182-332
               

               
Cow position:
               
chr4:50837883-50837726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
182-387
               

               
Cow position:
               
chr4:23656151-23655941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
182-423
               

               
Cow position:
               
chr4:38358643-38358892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
53, 108
               

               
Conread position:
               
182-429
               

               
Cow position:
               
chr4:23880491-23880734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
111, 75
               

               
Conread position:
               
182-445
               

               
Cow position:
               
chr4:44772859-44773138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
66, 223
               

               
Conread position:
               
182-448
               

               
Cow position:
               
chr4:45800060-45799779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 105
               

               
Conread position:
               
182-488
               

               
Cow position:
               
chr4:41186221-41186535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
147, 69
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr4:8770274-8769944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 147
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr4:10732401-10732060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 173
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr4:13326772-13327116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
66, 5
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr4:15905286-15904936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
64, 101
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr4:24371679-24372013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr4:31004232-31004570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr4:34165806-34166140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
84, 54
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr4:43740711-43740359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
67, 98
               

               
Conread position:
               
183-294
               

               
Cow position:
               
chr4:16796995-16797110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 85
               

               
Conread position:
               
183-317
               

               
Cow position:
               
chr4:52583898-52584034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
183-326
               

               
Cow position:
               
chr4:56513835-56513977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
183-328
               

               
Cow position:
               
chr4:21553913-21554057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
141, 68
               

               
Conread position:
               
183-331
               

               
Cow position:
               
chr4:60621416-60621570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
183-503
               

               
Cow position:
               
chr4:17124130-17124446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 131
               

               
Conread position:
               
183-505
               

               
Cow position:
               
chr4:22842512-22842195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
132, 39
               

               
Conread position:
               
183-505
               

               
Cow position:
               
chr4:45775151-45775499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
56, 232
               

               
Conread position:
               
183-515
               

               
Cow position:
               
chr4:26323923-26323574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 109
               

               
Conread position:
               
183-515
               

               
Cow position:
               
chr4:54478735-54479066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
184-374
               

               
Cow position:
               
chr4:13995566-13995366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
67, 98
               

               
Conread position:
               
184-404
               

               
Cow position:
               
chr4:60506454-60506226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
184-439
               

               
Cow position:
               
chr4:59055693-59055949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
146, 21
               

               
Conread position:
               
184-462
               

               
Cow position:
               
chr4:61066931-61066665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
235, 58
               

               
Conread position:
               
184-509
               

               
Cow position:
               
chr4:30778642-30778986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
184-515
               

               
Cow position:
               
chr4:23600347-23600013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
185-328
               

               
Cow position:
               
chr4:48227516-48227659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
185-336
               

               
Cow position:
               
chr4:61848740-61848897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
60, 145
               

               
Conread position:
               
185-500
               

               
Cow position:
               
chr4:54171802-54171475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
64, 213
               

               
Conread position:
               
185-513
               

               
Cow position:
               
chr4:1060102-1060425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 104
               

               
Conread position:
               
185-515
               

               
Cow position:
               
chr4:46070-45759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
185-515
               

               
Cow position:
               
chr4:34210214-34209867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
185-515
               

               
Cow position:
               
chr4:34383161-34383509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
186-331
               

               
Cow position:
               
chr4:39092060-39091912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
187-380
               

               
Cow position:
               
chr4:26901497-26901301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
65, 45
               

               
Conread position:
               
187-506
               

               
Cow position:
               
chr4:44449349-44449659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 15
               

               
Conread position:
               
188-482
               

               
Cow position:
               
chr4:48423042-48422750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
188-515
               

               
Cow position:
               
chr4:42423631-42423960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 249
               

               
Conread position:
               
190-477
               

               
Cow position:
               
chr4:56498698-56499003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
190-515
               

               
Cow position:
               
chr4:16594248-16593921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
190-515
               

               
Cow position:
               
chr4:19097463-19097129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 230
               

               
Conread position:
               
191-515
               

               
Cow position:
               
chr4:13941624-13941297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
194-328
               

               
Cow position:
               
chr4:53380859-53380716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
194-491
               

               
Cow position:
               
chr4:25537718-25537407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
194-503
               

               
Cow position:
               
chr4:68889407-68889707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
194-515
               

               
Cow position:
               
chr4:17052417-17052764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
196-515
               

               
Cow position:
               
chr4:28836704-28836368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
198-375
               

               
Cow position:
               
chr4:34983339-34983517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 131
               

               
Conread position:
               
198-432
               

               
Cow position:
               
chr4:19430528-19430283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
198-440
               

               
Cow position:
               
chr4:61188702-61188957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
199-498
               

               
Cow position:
               
chr4:37313334-37313025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 139
               

               
Conread position:
               
201-417
               

               
Cow position:
               
chr4:34562542-34562318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 137
               

               
Conread position:
               
201-427
               

               
Cow position:
               
chr4:4277515-4277742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 125
               

               
Conread position:
               
202-434
               

               
Cow position:
               
chr4:10851296-10851528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
202-515
               

               
Cow position:
               
chr4:7571570-7571248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
48, 74
               

               
Conread position:
               
203-328
               

               
Cow position:
               
chr4:12716738-12716867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
204-396
               

               
Cow position:
               
chr4:60141366-60141559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
35, 147
               

               
Conread position:
               
205-500
               

               
Cow position:
               
chr4:6653881-6653582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
205-515
               

               
Cow position:
               
chr4:25888686-25888992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
125, 37
               

               
Conread position:
               
206-321
               

               
Cow position:
               
chr4:27425865-27425747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
206-515
               

               
Cow position:
               
chr4:62920720-62921024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
53, 95
               

               
Conread position:
               
207-361
               

               
Cow position:
               
chr4:54650329-54650492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
208-328
               

               
Cow position:
               
chr4:479639-479763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
208-328
               

               
Cow position:
               
chr4:56805326-56805205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
208-514
               

               
Cow position:
               
chr4:38999579-38999265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
209-466
               

               
Cow position:
               
chr4:45626479-45626737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
209-477
               

               
Cow position:
               
chr4:45074212-45073940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
209-515
               

               
Cow position:
               
chr4:20157271-20157579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
210-500
               

               
Cow position:
               
chr4:36577480-36577777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
210-515
               

               
Cow position:
               
chr4:63964839-63965152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
218-505
               

               
Cow position:
               
chr4:46455921-46456213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
218-515
               

               
Cow position:
               
chr4:13256219-13255926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
219-391
               

               
Cow position:
               
chr4:12135790-12135964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
103, 9
               

               
Conread position:
               
219-515
               

               
Cow position:
               
chr4:7808709-7808424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
227-339
               

               
Cow position:
               
chr4:66891932-66892044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
227-503
               

               
Cow position:
               
chr4:46597501-46597225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
227-509
               

               
Cow position:
               
chr4:63095942-63096229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 258
               

               
Conread position:
               
228-448
               

               
Cow position:
               
chr4:54541511-54541737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
228-515
               

               
Cow position:
               
chr4:14945188-14944897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
230-429
               

               
Cow position:
               
chr4:61235080-61235277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
168, 33
               

               
Conread position:
               
230-471
               

               
Cow position:
               
chr4:11380405-11380166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
210, 19
               

               
Conread position:
               
230-500
               

               
Cow position:
               
chr4:21874928-21874669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
230-505
               

               
Cow position:
               
chr4:14153233-14152936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 19
               

               
Conread position:
               
230-515
               

               
Cow position:
               
chr4:36731318-36731032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 154
               

               
Conread position:
               
232-406
               

               
Cow position:
               
chr4:61704740-61704913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
64, 106
               

               
Conread position:
               
232-515
               

               
Cow position:
               
chr4:48961358-48961642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 110
               

               
Conread position:
               
234-429
               

               
Cow position:
               
chr4:54920964-54921162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
236-509
               

               
Cow position:
               
chr4:62771801-62772081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
236-514
               

               
Cow position:
               
chr4:11871800-11872069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
23, 131
               

               
Conread position:
               
236-515
               

               
Cow position:
               
chr4:45644199-45644470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
198, 13
               

               
Conread position:
               
236-515
               

               
Cow position:
               
chr4:47348946-47348665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 23
               

               
Conread position:
               
236-515
               

               
Cow position:
               
chr4:48143959-48143667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 113
               

               
Conread position:
               
237-326
               

               
Cow position:
               
chr4:48321403-48321491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
237-328
               

               
Cow position:
               
chr4:20276826-20276734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
237-329
               

               
Cow position:
               
chr4:28570216-28570125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
237-363
               

               
Cow position:
               
chr4:32272854-32272982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
237-390
               

               
Cow position:
               
chr4:15462130-15462289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 118
               

               
Conread position:
               
237-393
               

               
Cow position:
               
chr4:36744699-36744541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
237-394
               

               
Cow position:
               
chr4:65753129-65753291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
237-417
               

               
Cow position:
               
chr4:39984527-39984333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
237-449
               

               
Cow position:
               
chr4:19324093-19323878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
237-453
               

               
Cow position:
               
chr4:47510505-47510290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
237-463
               

               
Cow position:
               
chr4:65265185-65265421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
237-465
               

               
Cow position:
               
chr4:19098593-19098357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 216
               

               
Conread position:
               
237-482
               

               
Cow position:
               
chr4:48173259-48173009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 160
               

               
Conread position:
               
237-486
               

               
Cow position:
               
chr4:47280248-47280005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
237-493
               

               
Cow position:
               
chr4:37675733-37675476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
170, 91
               

               
Conread position:
               
237-498
               

               
Cow position:
               
chr4:19542251-19541991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
116, 12
               

               
Conread position:
               
237-500
               

               
Cow position:
               
chr4:49089905-49089641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
237-505
               

               
Cow position:
               
chr4:54191210-54190936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 113
               

               
Conread position:
               
237-506
               

               
Cow position:
               
chr4:13973849-13974122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 136
               

               
Conread position:
               
237-506
               

               
Cow position:
               
chr4:59378030-59377761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 159
               

               
Conread position:
               
237-511
               

               
Cow position:
               
chr4:51784299-51784020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
89, 117
               

               
Conread position:
               
237-514
               

               
Cow position:
               
chr4:58880841-58881124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr4:8947505-8947231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr4:9815226-9815510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr4:12903941-12903659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
88, 270
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr4:18095552-18095836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 87
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr4:19321959-19322245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr4:30792089-30791806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 128
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr4:44782495-44782211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr4:45367860-45367571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
237-515
               

               
Cow position:
               
chr4:65650014-65650287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
242, 96
               

               
Conread position:
               
238-382
               

               
Cow position:
               
chr4:58305789-58305933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
238-382
               

               
Cow position:
               
chr4:60442925-60443068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
238-388
               

               
Cow position:
               
chr4:10472309-10472155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
238-405
               

               
Cow position:
               
chr4:51920664-51920494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 165
               

               
Conread position:
               
238-415
               

               
Cow position:
               
chr4:65131334-65131514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
238-467
               

               
Cow position:
               
chr4:17084221-17084455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
91, 29
               

               
Conread position:
               
238-485
               

               
Cow position:
               
chr4:48396678-48396926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
238-505
               

               
Cow position:
               
chr4:2602348-2602079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
238-515
               

               
Cow position:
               
chr4:25984338-25984064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
238-515
               

               
Cow position:
               
chr4:27540726-27540459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
238-515
               

               
Cow position:
               
chr4:32726343-32726064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
87, 158
               

               
Conread position:
               
238-515
               

               
Cow position:
               
chr4:33433138-33433426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
238-515
               

               
Cow position:
               
chr4:36893479-36893195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
238-515
               

               
Cow position:
               
chr4:37502931-37502655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
238-515
               

               
Cow position:
               
chr4:46591786-46591502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
84, 146
               

               
Conread position:
               
238-515
               

               
Cow position:
               
chr4:53100922-53100647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 203
               

               
Conread position:
               
239-515
               

               
Cow position:
               
chr4:11194304-11194023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 104
               

               
Conread position:
               
239-515
               

               
Cow position:
               
chr4:37704384-37704102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
240-346
               

               
Cow position:
               
chr4:2593960-2593854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
240-439
               

               
Cow position:
               
chr4:8918-9116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
240-505
               

               
Cow position:
               
chr4:61313097-61313360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
240-515
               

               
Cow position:
               
chr4:42921744-42922014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 17
               

               
Conread position:
               
240-515
               

               
Cow position:
               
chr4:45589485-45589758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 11
               

               
Conread position:
               
241-515
               

               
Cow position:
               
chr4:2141851-2141583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
160, 22
               

               
Conread position:
               
241-515
               

               
Cow position:
               
chr4:45738358-45738640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 241
               

               
Conread position:
               
242-448
               

               
Cow position:
               
chr4:34503412-34503197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
9, 163
               

               
Conread position:
               
242-502
               

               
Cow position:
               
chr4:54524230-54524479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
242-515
               

               
Cow position:
               
chr4:25879506-25879233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
242-515
               

               
Cow position:
               
chr4:26401070-26400798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 117
               

               
Conread position:
               
242-515
               

               
Cow position:
               
chr4:39128653-39128369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
243-328
               

               
Cow position:
               
chr4:19580641-19580726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
87
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
243-488
               

               
Cow position:
               
chr4:38952666-38952417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
243-505
               

               
Cow position:
               
chr4:43865742-43866010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
8, 80
               

               
Conread position:
               
243-512
               

               
Cow position:
               
chr4:19582503-19582776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
243-513
               

               
Cow position:
               
chr4:65175030-65175299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
8, 152
               

               
Conread position:
               
243-513
               

               
Cow position:
               
chr4:65179034-65179288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
243-515
               

               
Cow position:
               
chr4:41185807-41186069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
176, 6
               

               
Conread position:
               
245-512
               

               
Cow position:
               
chr4:65815595-65815857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
247-434
               

               
Cow position:
               
chr4:66136498-66136684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
172, 141
               

               
Conread position:
               
247-504
               

               
Cow position:
               
chr4:55395871-55395609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
249-389
               

               
Cow position:
               
chr4:50676065-50676205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-391
               

               
Cow position:
               
chr4:56336773-56336630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
249-432
               

               
Cow position:
               
chr4:49826360-49826176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
249-515
               

               
Cow position:
               
chr4:1495301-1495567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
249-515
               

               
Cow position:
               
chr4:24001860-24002128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
249-515
               

               
Cow position:
               
chr4:69543290-69543016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
81, 169
               

               
Conread position:
               
250-491
               

               
Cow position:
               
chr4:46476839-46477087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
78, 211
               

               
Conread position:
               
251-514
               

               
Cow position:
               
chr4:3850657-3850395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 138
               

               
Conread position:
               
251-515
               

               
Cow position:
               
chr4:10379217-10378946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
251-516
               

               
Cow position:
               
chr4:65950760-65950485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
252-509
               

               
Cow position:
               
chr4:21017-20762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
252-515
               

               
Cow position:
               
chr4:5460757-5461024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
254-509
               

               
Cow position:
               
chr4:53346434-53346170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 153
               

               
Conread position:
               
255-514
               

               
Cow position:
               
chr4:27755202-27755462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
75, 136
               

               
Conread position:
               
256-477
               

               
Cow position:
               
chr4:46183514-46183286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 95
               

               
Conread position:
               
257-434
               

               
Cow position:
               
chr4:20504987-20505161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
257-515
               

               
Cow position:
               
chr4:33030651-33030390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
258-515
               

               
Cow position:
               
chr4:41602948-41602686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 63
               

               
Conread position:
               
259-480
               

               
Cow position:
               
chr4:39609815-39609606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
260-402
               

               
Cow position:
               
chr4:42176377-42176521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
63, 137
               

               
Conread position:
               
260-515
               

               
Cow position:
               
chr4:5999098-5999351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
261-358
               

               
Cow position:
               
chr4:7650712-7650615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
262-429
               

               
Cow position:
               
chr4:61478700-61478527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
264-435
               

               
Cow position:
               
chr4:13990866-13991035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
155, 106
               

               
Conread position:
               
265-507
               

               
Cow position:
               
chr4:17111782-17112031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
58, 140
               

               
Conread position:
               
265-514
               

               
Cow position:
               
chr4:33395606-33395855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
64, 126
               

               
Conread position:
               
267-513
               

               
Cow position:
               
chr4:16601973-16602213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
152, 72
               

               
Conread position:
               
267-515
               

               
Cow position:
               
chr4:21257034-21257287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
14, 186
               

               
Conread position:
               
268-514
               

               
Cow position:
               
chr4:46487752-46487993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
269-505
               

               
Cow position:
               
chr4:20139429-20139673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 43
               

               
Conread position:
               
272-509
               

               
Cow position:
               
chr4:65432235-65431994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 207
               

               
Conread position:
               
272-515
               

               
Cow position:
               
chr4:16799101-16799355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
276-515
               

               
Cow position:
               
chr4:620054-620312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
277-515
               

               
Cow position:
               
chr4:17474519-17474274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
53, 127
               

               
Conread position:
               
278-492
               

               
Cow position:
               
chr4:39231446-39231655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
278-515
               

               
Cow position:
               
chr4:21232795-21233036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
279-515
               

               
Cow position:
               
chr4:22741338-22741574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
280-515
               

               
Cow position:
               
chr4:11332174-11331930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
50, 124
               

               
Conread position:
               
280-515
               

               
Cow position:
               
chr4:66111994-66112235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
50, 121
               

               
Conread position:
               
281-509
               

               
Cow position:
               
chr4:51739641-51739865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
141, 53
               

               
Conread position:
               
284-434
               

               
Cow position:
               
chr4:19493628-19493473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
285-515
               

               
Cow position:
               
chr4:46552265-46552482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
136, 49
               

               
Conread position:
               
287-512
               

               
Cow position:
               
chr4:33612289-33612518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
288-489
               

               
Cow position:
               
chr4:13771332-13771525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
35, 128
               

               
Conread position:
               
288-515
               

               
Cow position:
               
chr4:24744337-24744571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
42, 114
               

               
Conread position:
               
290-468
               

               
Cow position:
               
chr4:67466789-67466607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 118
               

               
Conread position:
               
291-506
               

               
Cow position:
               
chr4:68362987-68362781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
116, 102
               

               
Conread position:
               
293-515
               

               
Cow position:
               
chr4:14470506-14470732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
306-514
               

               
Cow position:
               
chr4:64072304-64072510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
307-467
               

               
Cow position:
               
chr4:29079149-29078990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
308-512
               

               
Cow position:
               
chr4:19497217-19497411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
315-515
               

               
Cow position:
               
chr4:3689746-3689546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
320-509
               

               
Cow position:
               
chr4:24458069-24458255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
99, 116
               

               
Conread position:
               
323-513
               

               
Cow position:
               
chr4:14964811-14964621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
8, 152
               

               
Conread position:
               
324-515
               

               
Cow position:
               
chr4:13832578-13832763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
324-515
               

               
Cow position:
               
chr4:20299305-20299112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
95, 163
               

               
Conread position:
               
326-515
               

               
Cow position:
               
chr4:19463524-19463333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
337-503
               

               
Cow position:
               
chr4:47047912-47047743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
338-481
               

               
Cow position:
               
chr4:48165338-48165476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 76
               

               
Conread position:
               
343-515
               

               
Cow position:
               
chr4:27291942-27292118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
350-515
               

               
Cow position:
               
chr4:561405-561243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
351-515
               

               
Cow position:
               
chr4:22215650-22215814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
351-515
               

               
Cow position:
               
chr4:56233685-56233525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 68
               

               
Conread position:
               
351-516
               

               
Cow position:
               
chr4:19438468-19438297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
351-516
               

               
Cow position:
               
chr4:33357939-33357771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
352-515
               

               
Cow position:
               
chr4:36725043-36724876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
354-514
               

               
Cow position:
               
chr4:41907801-41907953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
355-512
               

               
Cow position:
               
chr4:53209236-53209078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
396-515
               

               
Cow position:
               
chr4:44072807-44072928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
23, 7
               
Show alignments to all cow chromosomes.