Non-Coding RNA Search

Cow genome map


           Conread name:
           Ova1-OVRM10096D07
        

               Conread position:
               108-397
               

               Cow position:
               chr5:41403309-41403582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               121-501
               

               Cow position:
               chr5:14903790-14904191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               272
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               141-512
               

               Cow position:
               chr5:58675-59055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               105, 15
               

               Conread position:
               142-328
               

               Cow position:
               chr5:25462340-25462150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               142-328
               

               Cow position:
               chr5:53779409-53779217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               111, 29
               

               Conread position:
               142-515
               

               Cow position:
               chr5:11426977-11427367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               23, 64
               

               Conread position:
               142-515
               

               Cow position:
               chr5:24349342-24348978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               187, 18
               

               Conread position:
               143-515
               

               Cow position:
               chr5:34562262-34561883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 29
               

               Conread position:
               144-387
               

               Cow position:
               chr5:44163120-44163369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               76, 108
               

               Conread position:
               144-505
               

               Cow position:
               chr5:32975308-32975672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               145-324
               

               Cow position:
               chr5:30221528-30221712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               92, 18
               

               Conread position:
               145-515
               

               Cow position:
               chr5:51053395-51053777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 247
               

               Conread position:
               147-477
               

               Cow position:
               chr5:43391274-43390941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               169, 8
               

               Conread position:
               147-515
               

               Cow position:
               chr5:8023966-8024324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 25
               

               Conread position:
               148-298
               

               Cow position:
               chr5:49508549-49508706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               148-328
               

               Cow position:
               chr5:70572606-70572433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               148-359
               

               Cow position:
               chr5:36823120-36822915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               10, 56
               

               Conread position:
               148-515
               

               Cow position:
               chr5:44028059-44028430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 50
               

               Conread position:
               148-515
               

               Cow position:
               chr5:73167767-73168127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               96, 8
               

               Conread position:
               150-287
               

               Cow position:
               chr5:20736631-20736774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               150-318
               

               Cow position:
               chr5:46715730-46715553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               87, 133
               

               Conread position:
               150-372
               

               Cow position:
               chr5:56525464-56525691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               100, 13
               

               Conread position:
               151-316
               

               Cow position:
               chr5:17537433-17537599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               151-328
               

               Cow position:
               chr5:52029654-52029469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               151-503
               

               Cow position:
               chr5:3242249-3242593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 98
               

               Conread position:
               151-514
               

               Cow position:
               chr5:50723294-50722920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               87, 251
               

               Conread position:
               152-313
               

               Cow position:
               chr5:58487619-58487452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               152-445
               

               Cow position:
               chr5:63627297-63627584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               93, 19
               

               Conread position:
               152-505
               

               Cow position:
               chr5:6572976-6572636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               153-310
               

               Cow position:
               chr5:55943475-55943636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               153-477
               

               Cow position:
               chr5:59384443-59384781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               75, 10
               

               Conread position:
               153-504
               

               Cow position:
               chr5:58320247-58320584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               175, 23
               

               Conread position:
               153-515
               

               Cow position:
               chr5:17999248-17999624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               12, 141
               

               Conread position:
               153-515
               

               Cow position:
               chr5:26377439-26377796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 22
               

               Conread position:
               154-264
               

               Cow position:
               chr5:56959424-56959309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               154-320
               

               Cow position:
               chr5:24108813-24108990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 129
               

               Conread position:
               154-381
               

               Cow position:
               chr5:7177397-7177157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               154-387
               

               Cow position:
               chr5:61049579-61049332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 131
               

               Conread position:
               154-388
               

               Cow position:
               chr5:30247285-30247523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               139, 6
               

               Conread position:
               154-401
               

               Cow position:
               chr5:35990005-35989743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               89, 128
               

               Conread position:
               154-502
               

               Cow position:
               chr5:57074096-57074450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 6
               

               Conread position:
               154-503
               

               Cow position:
               chr5:37941566-37941907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               93, 6
               

               Conread position:
               154-515
               

               Cow position:
               chr5:3626937-3627282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               30, 97
               

               Conread position:
               154-515
               

               Cow position:
               chr5:4280687-4280332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 245
               

               Conread position:
               154-515
               

               Cow position:
               chr5:18574423-18574041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               154-515
               

               Cow position:
               chr5:26262441-26262801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 108
               

               Conread position:
               154-515
               

               Cow position:
               chr5:41452449-41452792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               240, 14
               

               Conread position:
               155-325
               

               Cow position:
               chr5:70678403-70678580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               155-389
               

               Cow position:
               chr5:54751050-54750813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               93, 186
               

               Conread position:
               156-274
               

               Cow position:
               chr5:55414199-55414323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               156-308
               

               Cow position:
               chr5:4728311-4728156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               19, 81
               

               Conread position:
               156-310
               

               Cow position:
               chr5:41628435-41628585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               156-318
               

               Cow position:
               chr5:46710824-46710653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 127
               

               Conread position:
               156-318
               

               Cow position:
               chr5:65140539-65140371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               92, 18
               

               Conread position:
               156-338
               

               Cow position:
               chr5:3817446-3817638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               156-360
               

               Cow position:
               chr5:49821675-49821455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               156-361
               

               Cow position:
               chr5:34288012-34288224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               156-373
               

               Cow position:
               chr5:2240748-2240975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               181
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               90, 197
               

               Conread position:
               156-373
               

               Cow position:
               chr5:51246895-51247117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               156-389
               

               Cow position:
               chr5:6520248-6520009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 134
               

               Conread position:
               156-503
               

               Cow position:
               chr5:45225581-45225942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               92, 31
               

               Conread position:
               156-513
               

               Cow position:
               chr5:39333288-39333666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               249
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               78, 156
               

               Conread position:
               156-514
               

               Cow position:
               chr5:42064449-42064070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               22, 203
               

               Conread position:
               156-515
               

               Cow position:
               chr5:22242532-22242911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               156-515
               

               Cow position:
               chr5:24995979-24996352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               156-515
               

               Cow position:
               chr5:27155242-27154894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               260
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               156-515
               

               Cow position:
               chr5:44446633-44446997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               156-515
               

               Cow position:
               chr5:56014964-56014605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               157-318
               

               Cow position:
               chr5:12562520-12562683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               91, 123
               

               Conread position:
               157-336
               

               Cow position:
               chr5:34918585-34918397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               157-356
               

               Cow position:
               chr5:15991406-15991608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               92, 11
               

               Conread position:
               157-391
               

               Cow position:
               chr5:56860685-56860443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 115
               

               Conread position:
               157-405
               

               Cow position:
               chr5:62812067-62811806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               86, 178
               

               Conread position:
               158-448
               

               Cow position:
               chr5:11769510-11769206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               86, 14
               

               Conread position:
               159-434
               

               Cow position:
               chr5:70591778-70591523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               92, 12
               

               Conread position:
               160-328
               

               Cow position:
               chr5:57086825-57087001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               160-448
               

               Cow position:
               chr5:41935420-41935713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               88, 16
               

               Conread position:
               160-506
               

               Cow position:
               chr5:35235450-35235829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               85, 328
               

               Conread position:
               163-307
               

               Cow position:
               chr5:48104494-48104344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               163-328
               

               Cow position:
               chr5:60154001-60153837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               87, 115
               

               Conread position:
               163-364
               

               Cow position:
               chr5:37842046-37842256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               81, 9
               

               Conread position:
               163-389
               

               Cow position:
               chr5:34347499-34347730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               84, 160
               

               Conread position:
               163-514
               

               Cow position:
               chr5:47757006-47756644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               249
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               84, 122
               

               Conread position:
               163-515
               

               Cow position:
               chr5:7044472-7044836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               163-515
               

               Cow position:
               chr5:7057163-7057536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               258
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               85, 159
               

               Conread position:
               165-335
               

               Cow position:
               chr5:34787804-34787630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               85, 167
               

               Conread position:
               166-515
               

               Cow position:
               chr5:71495045-71494688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               5, 49
               

               Conread position:
               168-505
               

               Cow position:
               chr5:41713516-41713183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               171-304
               

               Cow position:
               chr5:14000865-14000731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               77, 27
               

               Conread position:
               171-307
               

               Cow position:
               chr5:21520224-21520358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               171-310
               

               Cow position:
               chr5:28660457-28660310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               171-317
               

               Cow position:
               chr5:19626802-19626651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               171-328
               

               Cow position:
               chr5:57447438-57447604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               171-328
               

               Cow position:
               chr5:61580506-61580343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               73, 34
               

               Conread position:
               171-386
               

               Cow position:
               chr5:44810011-44810238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               171-402
               

               Cow position:
               chr5:73253631-73253397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               79, 135
               

               Conread position:
               171-427
               

               Cow position:
               chr5:20288032-20288303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 209
               

               Conread position:
               171-428
               

               Cow position:
               chr5:68537438-68537707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               171-429
               

               Cow position:
               chr5:69099945-69099677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               171-434
               

               Cow position:
               chr5:67118630-67118372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               152, 37
               

               Conread position:
               171-448
               

               Cow position:
               chr5:7012623-7012910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               77, 115
               

               Conread position:
               171-474
               

               Cow position:
               chr5:12873978-12873655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 115
               

               Conread position:
               171-482
               

               Cow position:
               chr5:30233136-30232803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 125
               

               Conread position:
               171-489
               

               Cow position:
               chr5:3772068-3771745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               69, 165
               

               Conread position:
               171-489
               

               Cow position:
               chr5:36038779-36039107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               171-504
               

               Cow position:
               chr5:19278477-19278818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 110
               

               Conread position:
               171-505
               

               Cow position:
               chr5:36855431-36855085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 231
               

               Conread position:
               171-512
               

               Cow position:
               chr5:16893552-16893898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 94
               

               Conread position:
               171-512
               

               Cow position:
               chr5:35228918-35229253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               72, 29
               

               Conread position:
               171-513
               

               Cow position:
               chr5:55756187-55756558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               70, 196
               

               Conread position:
               171-515
               

               Cow position:
               chr5:11229445-11229798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 45
               

               Conread position:
               171-515
               

               Cow position:
               chr5:21829090-21828737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 31
               

               Conread position:
               171-515
               

               Cow position:
               chr5:35763470-35763149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 27
               

               Conread position:
               171-515
               

               Cow position:
               chr5:47316749-47317099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               78, 31
               

               Conread position:
               171-515
               

               Cow position:
               chr5:72903014-72903361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               78, 154
               

               Conread position:
               172-277
               

               Cow position:
               chr5:17254003-17254111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               172-280
               

               Cow position:
               chr5:8149084-8149196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 101
               

               Conread position:
               172-281
               

               Cow position:
               chr5:63940229-63940339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               172-286
               

               Cow position:
               chr5:74690027-74690150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               172-289
               

               Cow position:
               chr5:44836760-44836643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               76, 8
               

               Conread position:
               172-297
               

               Cow position:
               chr5:18706180-18706060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               172-301
               

               Cow position:
               chr5:40102523-40102651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               63, 30
               

               Conread position:
               172-304
               

               Cow position:
               chr5:74050049-74049910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               172-307
               

               Cow position:
               chr5:18579114-18578975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               172-307
               

               Cow position:
               chr5:29213371-29213244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               172-307
               

               Cow position:
               chr5:54150059-54149929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               172-309
               

               Cow position:
               chr5:71794942-71794806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               172-310
               

               Cow position:
               chr5:14419792-14419930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               73, 54
               

               Conread position:
               172-310
               

               Cow position:
               chr5:56563973-56563834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               76, 82
               

               Conread position:
               172-313
               

               Cow position:
               chr5:45854726-45854574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               172-313
               

               Cow position:
               chr5:55949453-55949602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               172-314
               

               Cow position:
               chr5:5009883-5010024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               172-314
               

               Cow position:
               chr5:7675933-7676079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               172-314
               

               Cow position:
               chr5:56327501-56327643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               77, 30
               

               Conread position:
               172-314
               

               Cow position:
               chr5:63172823-63172968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               172-316
               

               Cow position:
               chr5:34639349-34639196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               172-317
               

               Cow position:
               chr5:25450169-25450027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               172-317
               

               Cow position:
               chr5:64061238-64061092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               67, 79
               

               Conread position:
               172-318
               

               Cow position:
               chr5:52849306-52849157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               172-319
               

               Cow position:
               chr5:31234929-31234783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               172-320
               

               Cow position:
               chr5:14454269-14454111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               73, 112
               

               Conread position:
               172-320
               

               Cow position:
               chr5:47220717-47220558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               172-324
               

               Cow position:
               chr5:56477430-56477272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 10
               

               Conread position:
               172-325
               

               Cow position:
               chr5:30492566-30492729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               172-325
               

               Cow position:
               chr5:54127512-54127356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               77, 154
               

               Conread position:
               172-325
               

               Cow position:
               chr5:57399026-57399188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               172-325
               

               Cow position:
               chr5:59335998-59335835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               172-326
               

               Cow position:
               chr5:22957628-22957474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               133
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               172-326
               

               Cow position:
               chr5:32975988-32975822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               74, 31
               

               Conread position:
               172-327
               

               Cow position:
               chr5:75478693-75478852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               77, 24
               

               Conread position:
               172-328
               

               Cow position:
               chr5:7558567-7558706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               172-328
               

               Cow position:
               chr5:19079468-19079314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 118
               

               Conread position:
               172-328
               

               Cow position:
               chr5:19968135-19968297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 27
               

               Conread position:
               172-328
               

               Cow position:
               chr5:21721251-21721408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               142
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               72, 6
               

               Conread position:
               172-328
               

               Cow position:
               chr5:36143203-36143046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 32
               

               Conread position:
               172-328
               

               Cow position:
               chr5:40122383-40122548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               172-328
               

               Cow position:
               chr5:43611924-43611760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 30
               

               Conread position:
               172-328
               

               Cow position:
               chr5:52211466-52211625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               172-328
               

               Cow position:
               chr5:57687355-57687521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               172-328
               

               Cow position:
               chr5:59662832-59662996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               172-328
               

               Cow position:
               chr5:62996184-62996020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 159
               

               Conread position:
               172-328
               

               Cow position:
               chr5:63300303-63300140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               172-328
               

               Cow position:
               chr5:69357076-69356927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               172-328
               

               Cow position:
               chr5:74887674-74887838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               172-329
               

               Cow position:
               chr5:5030664-5030504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               74, 55
               

               Conread position:
               172-329
               

               Cow position:
               chr5:41984566-41984416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 24
               

               Conread position:
               172-329
               

               Cow position:
               chr5:46479022-46479181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               69, 26
               

               Conread position:
               172-331
               

               Cow position:
               chr5:7713973-7713821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               172-331
               

               Cow position:
               chr5:53824888-53825055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               172-331
               

               Cow position:
               chr5:69765809-69765975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               172-332
               

               Cow position:
               chr5:12478748-12478900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               172-332
               

               Cow position:
               chr5:67340106-67339941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               172-335
               

               Cow position:
               chr5:6876740-6876916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               172-335
               

               Cow position:
               chr5:8136684-8136526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               172-335
               

               Cow position:
               chr5:58401790-58401621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               172-336
               

               Cow position:
               chr5:37253648-37253480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               142
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               172-336
               

               Cow position:
               chr5:54340991-54340820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               76, 23
               

               Conread position:
               172-338
               

               Cow position:
               chr5:1693867-1694039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               172-339
               

               Cow position:
               chr5:57497201-57497376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               172-340
               

               Cow position:
               chr5:52192213-52192378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               74, 31
               

               Conread position:
               172-345
               

               Cow position:
               chr5:19811745-19811566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 176
               

               Conread position:
               172-359
               

               Cow position:
               chr5:6086116-6086315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               172-361
               

               Cow position:
               chr5:11303329-11303139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               15, 47
               

               Conread position:
               172-361
               

               Cow position:
               chr5:49207104-49207297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               78, 179
               

               Conread position:
               172-364
               

               Cow position:
               chr5:51289376-51289568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               78, 97
               

               Conread position:
               172-365
               

               Cow position:
               chr5:35190331-35190132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               172-368
               

               Cow position:
               chr5:40241959-40241765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               158, 91
               

               Conread position:
               172-368
               

               Cow position:
               chr5:54312824-54312620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               74, 13
               

               Conread position:
               172-371
               

               Cow position:
               chr5:26167644-26167437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               79, 12
               

               Conread position:
               172-372
               

               Cow position:
               chr5:26147813-26147606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               73, 12
               

               Conread position:
               172-372
               

               Cow position:
               chr5:65552496-65552696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               76, 33
               

               Conread position:
               172-373
               

               Cow position:
               chr5:5016648-5016443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               14, 166
               

               Conread position:
               172-376
               

               Cow position:
               chr5:17828252-17828468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 186
               

               Conread position:
               172-376
               

               Cow position:
               chr5:60948357-60948144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               71, 186
               

               Conread position:
               172-377
               

               Cow position:
               chr5:64060671-64060456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               172-381
               

               Cow position:
               chr5:56549593-56549370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 111
               

               Conread position:
               172-389
               

               Cow position:
               chr5:43604364-43604139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               75, 157
               

               Conread position:
               172-391
               

               Cow position:
               chr5:52853192-52852967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               76, 183
               

               Conread position:
               172-391
               

               Cow position:
               chr5:55965667-55965898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               172-391
               

               Cow position:
               chr5:56059839-56060074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               172-391
               

               Cow position:
               chr5:60514800-60515032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               27, 142
               

               Conread position:
               172-392
               

               Cow position:
               chr5:51298490-51298718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               172-395
               

               Cow position:
               chr5:56613338-56613573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               77, 164
               

               Conread position:
               172-396
               

               Cow position:
               chr5:31052613-31052371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               71, 51
               

               Conread position:
               172-397
               

               Cow position:
               chr5:55783736-55783963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               72, 157
               

               Conread position:
               172-399
               

               Cow position:
               chr5:46540835-46541067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               172-400
               

               Cow position:
               chr5:57062303-57062542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               172-400
               

               Cow position:
               chr5:59627317-59627087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               172-406
               

               Cow position:
               chr5:17105070-17104833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               172-411
               

               Cow position:
               chr5:45186890-45187142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               36, 130
               

               Conread position:
               172-412
               

               Cow position:
               chr5:26548918-26549165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               172-412
               

               Cow position:
               chr5:57101301-57101549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               76, 101
               

               Conread position:
               172-416
               

               Cow position:
               chr5:8736052-8736317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               70, 154
               

               Conread position:
               172-434
               

               Cow position:
               chr5:15471143-15470886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               234, 23
               

               Conread position:
               172-435
               

               Cow position:
               chr5:63192529-63192789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 96
               

               Conread position:
               172-437
               

               Cow position:
               chr5:45405272-45404992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 112
               

               Conread position:
               172-448
               

               Cow position:
               chr5:20843173-20843462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               172-465
               

               Cow position:
               chr5:19752526-19752226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 157
               

               Conread position:
               172-468
               

               Cow position:
               chr5:32394827-32394519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               62, 238
               

               Conread position:
               172-468
               

               Cow position:
               chr5:70271092-70270783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               72, 281
               

               Conread position:
               172-471
               

               Cow position:
               chr5:43403134-43402815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 110
               

               Conread position:
               172-474
               

               Cow position:
               chr5:56548791-56548490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               66, 92
               

               Conread position:
               172-477
               

               Cow position:
               chr5:31475909-31475593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               69, 238
               

               Conread position:
               172-477
               

               Cow position:
               chr5:35976719-35976430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               172-477
               

               Cow position:
               chr5:50575993-50575694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               158, 10
               

               Conread position:
               172-478
               

               Cow position:
               chr5:28945855-28946155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               155, 18
               

               Conread position:
               172-479
               

               Cow position:
               chr5:33834265-33833951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               74, 130
               

               Conread position:
               172-483
               

               Cow position:
               chr5:61914796-61914475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               73, 164
               

               Conread position:
               172-487
               

               Cow position:
               chr5:36650780-36650448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               64, 111
               

               Conread position:
               172-489
               

               Cow position:
               chr5:35784780-35785079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               5, 67
               

               Conread position:
               172-497
               

               Cow position:
               chr5:29895396-29895087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               67, 163
               

               Conread position:
               172-498
               

               Cow position:
               chr5:17028301-17027985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               156, 64
               

               Conread position:
               172-498
               

               Cow position:
               chr5:60016389-60016055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 235
               

               Conread position:
               172-500
               

               Cow position:
               chr5:11667959-11668300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 188
               

               Conread position:
               172-501
               

               Cow position:
               chr5:12902144-12901800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               247
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               73, 170
               

               Conread position:
               172-502
               

               Cow position:
               chr5:71768283-71768593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               68, 105
               

               Conread position:
               172-503
               

               Cow position:
               chr5:33560513-33560851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               172-504
               

               Cow position:
               chr5:12434760-12434418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 77
               

               Conread position:
               172-505
               

               Cow position:
               chr5:26990612-26990273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               172-505
               

               Cow position:
               chr5:27102588-27102913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               148, 65
               

               Conread position:
               172-505
               

               Cow position:
               chr5:36868962-36868621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               76, 130
               

               Conread position:
               172-505
               

               Cow position:
               chr5:49920150-49919805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               68, 12
               

               Conread position:
               172-506
               

               Cow position:
               chr5:40152712-40152356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               76, 115
               

               Conread position:
               172-507
               

               Cow position:
               chr5:12557062-12557410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 328
               

               Conread position:
               172-508
               

               Cow position:
               chr5:12322586-12322923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 251
               

               Conread position:
               172-508
               

               Cow position:
               chr5:18899181-18898857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               157, 18
               

               Conread position:
               172-508
               

               Cow position:
               chr5:56028320-56028649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 174
               

               Conread position:
               172-509
               

               Cow position:
               chr5:17086792-17087148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               172-509
               

               Cow position:
               chr5:34625173-34624849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 79
               

               Conread position:
               172-509
               

               Cow position:
               chr5:35685158-35684815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 26
               

               Conread position:
               172-509
               

               Cow position:
               chr5:45845465-45845815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 108
               

               Conread position:
               172-512
               

               Cow position:
               chr5:21617680-21617332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 245
               

               Conread position:
               172-512
               

               Cow position:
               chr5:38833339-38832997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 30
               

               Conread position:
               172-513
               

               Cow position:
               chr5:42670648-42670982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 55
               

               Conread position:
               172-513
               

               Cow position:
               chr5:44673930-44673560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               245
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               172-514
               

               Cow position:
               chr5:17371470-17371832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               62, 116
               

               Conread position:
               172-514
               

               Cow position:
               chr5:47870829-47871175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               107, 51
               

               Conread position:
               172-514
               

               Cow position:
               chr5:61726182-61725845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 104
               

               Conread position:
               172-514
               

               Cow position:
               chr5:63647252-63647601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               65, 132
               

               Conread position:
               172-515
               

               Cow position:
               chr5:991699-991337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 246
               

               Conread position:
               172-515
               

               Cow position:
               chr5:1247488-1247147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               244
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               60, 33
               

               Conread position:
               172-515
               

               Cow position:
               chr5:2309333-2309689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 223
               

               Conread position:
               172-515
               

               Cow position:
               chr5:3582780-3582446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 227
               

               Conread position:
               172-515
               

               Cow position:
               chr5:5257062-5257421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               64, 265
               

               Conread position:
               172-515
               

               Cow position:
               chr5:5856085-5855746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               247
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               12, 8
               

               Conread position:
               172-515
               

               Cow position:
               chr5:9893900-9894256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               172-515
               

               Cow position:
               chr5:14550357-14550711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 230
               

               Conread position:
               172-515
               

               Cow position:
               chr5:15364095-15363765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 70
               

               Conread position:
               172-515
               

               Cow position:
               chr5:16025258-16025586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 68
               

               Conread position:
               172-515
               

               Cow position:
               chr5:23529077-23529402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               158, 66
               

               Conread position:
               172-515
               

               Cow position:
               chr5:25035029-25035371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 188
               

               Conread position:
               172-515
               

               Cow position:
               chr5:25495126-25495477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 28
               

               Conread position:
               172-515
               

               Cow position:
               chr5:26467852-26467494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               172-515
               

               Cow position:
               chr5:28224667-28224323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               157, 77
               

               Conread position:
               172-515
               

               Cow position:
               chr5:29903318-29903651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 54
               

               Conread position:
               172-515
               

               Cow position:
               chr5:30303106-30302764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 83
               

               Conread position:
               172-515
               

               Cow position:
               chr5:30628928-30629287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 112
               

               Conread position:
               172-515
               

               Cow position:
               chr5:35969765-35969413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 192
               

               Conread position:
               172-515
               

               Cow position:
               chr5:39695857-39695524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               157, 64
               

               Conread position:
               172-515
               

               Cow position:
               chr5:39937341-39936973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               70, 17
               

               Conread position:
               172-515
               

               Cow position:
               chr5:40039564-40039896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               150, 57
               

               Conread position:
               172-515
               

               Cow position:
               chr5:42050769-42050422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 44
               

               Conread position:
               172-515
               

               Cow position:
               chr5:43858193-43858561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               67, 329
               

               Conread position:
               172-515
               

               Cow position:
               chr5:45472499-45472140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               85, 24
               

               Conread position:
               172-515
               

               Cow position:
               chr5:46512543-46512892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 33
               

               Conread position:
               172-515
               

               Cow position:
               chr5:47602033-47601690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 55
               

               Conread position:
               172-515
               

               Cow position:
               chr5:53842516-53842155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               36, 152
               

               Conread position:
               172-515
               

               Cow position:
               chr5:55966648-55967008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 237
               

               Conread position:
               172-515
               

               Cow position:
               chr5:56524387-56524046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 73
               

               Conread position:
               172-515
               

               Cow position:
               chr5:57101572-57101905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 31
               

               Conread position:
               172-515
               

               Cow position:
               chr5:57934895-57935238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 65
               

               Conread position:
               172-515
               

               Cow position:
               chr5:62107258-62107620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 118
               

               Conread position:
               172-515
               

               Cow position:
               chr5:64139788-64139437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 241
               

               Conread position:
               172-515
               

               Cow position:
               chr5:64140763-64140401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               72, 229
               

               Conread position:
               172-515
               

               Cow position:
               chr5:64321987-64321624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 221
               

               Conread position:
               172-515
               

               Cow position:
               chr5:65941025-65941379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 105
               

               Conread position:
               172-515
               

               Cow position:
               chr5:65967512-65967857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               172-515
               

               Cow position:
               chr5:66972655-66972298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               254
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               65, 46
               

               Conread position:
               172-515
               

               Cow position:
               chr5:70951667-70952005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 141
               

               Conread position:
               172-515
               

               Cow position:
               chr5:74643459-74643800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 186
               

               Conread position:
               172-516
               

               Cow position:
               chr5:41009785-41010123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 78
               

               Conread position:
               172-518
               

               Cow position:
               chr5:49474329-49474674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 79
               

               Conread position:
               173-314
               

               Cow position:
               chr5:70545080-70545217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               173-317
               

               Cow position:
               chr5:59958393-59958247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               173-320
               

               Cow position:
               chr5:47960040-47960191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               73, 96
               

               Conread position:
               173-325
               

               Cow position:
               chr5:6245441-6245598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               173-327
               

               Cow position:
               chr5:53175025-53175195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               173-328
               

               Cow position:
               chr5:31648639-31648482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               76, 102
               

               Conread position:
               173-328
               

               Cow position:
               chr5:60100686-60100532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               77, 105
               

               Conread position:
               173-329
               

               Cow position:
               chr5:718373-718211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               173-364
               

               Cow position:
               chr5:29599328-29599516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 155
               

               Conread position:
               173-385
               

               Cow position:
               chr5:11562504-11562721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               70, 21
               

               Conread position:
               173-387
               

               Cow position:
               chr5:53935330-53935547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               72, 187
               

               Conread position:
               173-390
               

               Cow position:
               chr5:50824807-50824589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 76
               

               Conread position:
               173-391
               

               Cow position:
               chr5:22608863-22608639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               75, 32
               

               Conread position:
               173-444
               

               Cow position:
               chr5:61456071-61455787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               25, 165
               

               Conread position:
               173-463
               

               Cow position:
               chr5:57755810-57756108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               67, 59
               

               Conread position:
               173-470
               

               Cow position:
               chr5:29060715-29061003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               80, 163
               

               Conread position:
               173-495
               

               Cow position:
               chr5:14920702-14921039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 211
               

               Conread position:
               173-504
               

               Cow position:
               chr5:66339297-66338961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 63
               

               Conread position:
               173-505
               

               Cow position:
               chr5:44847803-44848145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               77, 232
               

               Conread position:
               173-514
               

               Cow position:
               chr5:40109708-40109371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 76
               

               Conread position:
               173-515
               

               Cow position:
               chr5:12760896-12761245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               82, 223
               

               Conread position:
               173-515
               

               Cow position:
               chr5:14314740-14314396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 69
               

               Conread position:
               173-515
               

               Cow position:
               chr5:30253964-30253612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 236
               

               Conread position:
               173-515
               

               Cow position:
               chr5:30276911-30276568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 232
               

               Conread position:
               173-515
               

               Cow position:
               chr5:39447301-39447660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 285
               

               Conread position:
               173-515
               

               Cow position:
               chr5:53835945-53835585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 142
               

               Conread position:
               173-515
               

               Cow position:
               chr5:56467894-56467571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               154, 43
               

               Conread position:
               173-515
               

               Cow position:
               chr5:64175906-64176246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 231
               

               Conread position:
               173-515
               

               Cow position:
               chr5:69338038-69337702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 50
               

               Conread position:
               174-306
               

               Cow position:
               chr5:44868578-44868441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               76, 114
               

               Conread position:
               174-307
               

               Cow position:
               chr5:31964771-31964647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               174-313
               

               Cow position:
               chr5:56624291-56624440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               174-324
               

               Cow position:
               chr5:56434106-56433948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               75, 155
               

               Conread position:
               174-325
               

               Cow position:
               chr5:43839774-43839933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 113
               

               Conread position:
               174-325
               

               Cow position:
               chr5:56643291-56643132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               174-327
               

               Cow position:
               chr5:26149258-26149097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               73, 58
               

               Conread position:
               174-328
               

               Cow position:
               chr5:17987670-17987832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               64, 133
               

               Conread position:
               174-328
               

               Cow position:
               chr5:19561223-19561386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               174-328
               

               Cow position:
               chr5:60207928-60207770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               67, 90
               

               Conread position:
               174-328
               

               Cow position:
               chr5:63031472-63031323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               174-331
               

               Cow position:
               chr5:16185603-16185437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               174-346
               

               Cow position:
               chr5:35394216-35394392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               174-353
               

               Cow position:
               chr5:24915302-24915493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               174-386
               

               Cow position:
               chr5:48919021-48918811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               159, 76
               

               Conread position:
               174-434
               

               Cow position:
               chr5:63241202-63240930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               74, 226
               

               Conread position:
               174-438
               

               Cow position:
               chr5:50101155-50101424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               74, 233
               

               Conread position:
               174-439
               

               Cow position:
               chr5:43408117-43408410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               72, 220
               

               Conread position:
               174-448
               

               Cow position:
               chr5:59626749-59627036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 110
               

               Conread position:
               174-478
               

               Cow position:
               chr5:25366322-25365999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               84, 24
               

               Conread position:
               174-505
               

               Cow position:
               chr5:35459073-35459413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               68, 180
               

               Conread position:
               174-506
               

               Cow position:
               chr5:30178279-30178630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               74, 182
               

               Conread position:
               174-512
               

               Cow position:
               chr5:27419525-27419848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               156, 64
               

               Conread position:
               174-512
               

               Cow position:
               chr5:35208486-35208140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               247
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               65, 228
               

               Conread position:
               174-514
               

               Cow position:
               chr5:16937811-16938137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               76, 124
               

               Conread position:
               174-514
               

               Cow position:
               chr5:62172621-62172288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 34
               

               Conread position:
               174-515
               

               Cow position:
               chr5:6528887-6528553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               174-515
               

               Cow position:
               chr5:11539829-11540177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               105, 77
               

               Conread position:
               174-515
               

               Cow position:
               chr5:29097585-29097230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               75, 62
               

               Conread position:
               174-515
               

               Cow position:
               chr5:53055336-53055689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               73, 186
               

               Conread position:
               174-515
               

               Cow position:
               chr5:55068923-55068581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               62, 41
               

               Conread position:
               174-515
               

               Cow position:
               chr5:59081969-59082321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               74, 184
               

               Conread position:
               174-515
               

               Cow position:
               chr5:72952047-72951710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 63
               

               Conread position:
               174-521
               

               Cow position:
               chr5:32338738-32339099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               175-298
               

               Cow position:
               chr5:43982539-43982408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               175-307
               

               Cow position:
               chr5:22898097-22898226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               76, 27
               

               Conread position:
               175-308
               

               Cow position:
               chr5:57585098-57584958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               175-314
               

               Cow position:
               chr5:71387421-71387283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               175-320
               

               Cow position:
               chr5:12504572-12504720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               175-328
               

               Cow position:
               chr5:4824375-4824210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               175-328
               

               Cow position:
               chr5:12668770-12668922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 77
               

               Conread position:
               175-328
               

               Cow position:
               chr5:29256486-29256645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 105
               

               Conread position:
               175-328
               

               Cow position:
               chr5:66287163-66287007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               75, 9
               

               Conread position:
               175-331
               

               Cow position:
               chr5:22186628-22186477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               175-331
               

               Cow position:
               chr5:42703981-42703828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               148, 30
               

               Conread position:
               175-361
               

               Cow position:
               chr5:695076-694890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 28
               

               Conread position:
               175-364
               

               Cow position:
               chr5:44722291-44722489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 135
               

               Conread position:
               175-373
               

               Cow position:
               chr5:75227991-75228185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               146, 60
               

               Conread position:
               175-383
               

               Cow position:
               chr5:12654687-12654907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               175-387
               

               Cow position:
               chr5:4267882-4267670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               147, 53
               

               Conread position:
               175-392
               

               Cow position:
               chr5:65760312-65760534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               64, 111
               

               Conread position:
               175-395
               

               Cow position:
               chr5:69383473-69383247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 93
               

               Conread position:
               175-398
               

               Cow position:
               chr5:60523949-60523721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               175-401
               

               Cow position:
               chr5:39036004-39035765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               63, 111
               

               Conread position:
               175-402
               

               Cow position:
               chr5:74039784-74040018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               76, 53
               

               Conread position:
               175-423
               

               Cow position:
               chr5:51065737-51065496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               155, 82
               

               Conread position:
               175-473
               

               Cow position:
               chr5:41885136-41884849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               64, 110
               

               Conread position:
               175-476
               

               Cow position:
               chr5:30805371-30805077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               76, 28
               

               Conread position:
               175-492
               

               Cow position:
               chr5:63832138-63831822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               153, 66
               

               Conread position:
               175-503
               

               Cow position:
               chr5:30487449-30487119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 90
               

               Conread position:
               175-505
               

               Cow position:
               chr5:41165304-41164969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 316
               

               Conread position:
               175-505
               

               Cow position:
               chr5:44796514-44796849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               175-509
               

               Cow position:
               chr5:66257856-66257516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 230
               

               Conread position:
               175-511
               

               Cow position:
               chr5:72895908-72895563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 238
               

               Conread position:
               175-513
               

               Cow position:
               chr5:50942938-50943277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 157
               

               Conread position:
               175-515
               

               Cow position:
               chr5:29828270-29827920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 116
               

               Conread position:
               175-515
               

               Cow position:
               chr5:35246885-35247239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 213
               

               Conread position:
               175-515
               

               Cow position:
               chr5:62639107-62638778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               155, 63
               

               Conread position:
               175-516
               

               Cow position:
               chr5:16214903-16214557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               82, 146
               

               Conread position:
               176-320
               

               Cow position:
               chr5:9559634-9559491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               176-325
               

               Cow position:
               chr5:54712847-54713000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               117, 75
               

               Conread position:
               176-335
               

               Cow position:
               chr5:44734506-44734673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               176-387
               

               Cow position:
               chr5:72045456-72045674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               176-388
               

               Cow position:
               chr5:33273918-33273693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               176-392
               

               Cow position:
               chr5:5017592-5017369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               64, 29
               

               Conread position:
               176-505
               

               Cow position:
               chr5:20128275-20127937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 224
               

               Conread position:
               176-505
               

               Cow position:
               chr5:72006661-72006973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               147, 18
               

               Conread position:
               176-509
               

               Cow position:
               chr5:22667291-22666970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 195
               

               Conread position:
               176-515
               

               Cow position:
               chr5:43922950-43923275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 52
               

               Conread position:
               176-515
               

               Cow position:
               chr5:56877691-56877359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 69
               

               Conread position:
               176-515
               

               Cow position:
               chr5:65776156-65776511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               177-314
               

               Cow position:
               chr5:64142434-64142579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 32
               

               Conread position:
               177-321
               

               Cow position:
               chr5:20127127-20126978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               177-434
               

               Cow position:
               chr5:61784505-61784774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               68, 106
               

               Conread position:
               177-498
               

               Cow position:
               chr5:71845706-71846036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               177-505
               

               Cow position:
               chr5:7723864-7723551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               145, 44
               

               Conread position:
               177-505
               

               Cow position:
               chr5:42845377-42845725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               70, 27
               

               Conread position:
               177-505
               

               Cow position:
               chr5:67932246-67932583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               62, 156
               

               Conread position:
               177-509
               

               Cow position:
               chr5:55956130-55955786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 89
               

               Conread position:
               177-514
               

               Cow position:
               chr5:55177100-55176762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 42
               

               Conread position:
               177-515
               

               Cow position:
               chr5:65136477-65136155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               74, 20
               

               Conread position:
               178-328
               

               Cow position:
               chr5:22386848-22386997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               178-339
               

               Cow position:
               chr5:65745549-65745717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               64, 104
               

               Conread position:
               178-491
               

               Cow position:
               chr5:53947118-53946790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               67, 222
               

               Conread position:
               178-514
               

               Cow position:
               chr5:34050327-34049983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               151, 78
               

               Conread position:
               178-514
               

               Cow position:
               chr5:39875324-39874995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               152, 59
               

               Conread position:
               180-319
               

               Cow position:
               chr5:31317218-31317071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               180-327
               

               Cow position:
               chr5:26790114-26790261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 84
               

               Conread position:
               180-330
               

               Cow position:
               chr5:57231847-57231693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               180-342
               

               Cow position:
               chr5:74065303-74065469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               71, 97
               

               Conread position:
               180-391
               

               Cow position:
               chr5:30562145-30561928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               180-396
               

               Cow position:
               chr5:34914837-34915062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               180-417
               

               Cow position:
               chr5:22795423-22795185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 29
               

               Conread position:
               180-433
               

               Cow position:
               chr5:56153816-56153569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               149, 62
               

               Conread position:
               180-434
               

               Cow position:
               chr5:59395881-59395611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               61, 103
               

               Conread position:
               180-456
               

               Cow position:
               chr5:6438808-6439103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               70, 128
               

               Conread position:
               180-505
               

               Cow position:
               chr5:47696243-47696561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 62
               

               Conread position:
               180-513
               

               Cow position:
               chr5:18289335-18289002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 156
               

               Conread position:
               180-514
               

               Cow position:
               chr5:56071075-56070728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               180-515
               

               Cow position:
               chr5:20779182-20779515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               73, 146
               

               Conread position:
               180-515
               

               Cow position:
               chr5:28302539-28302869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 23
               

               Conread position:
               180-515
               

               Cow position:
               chr5:30845323-30844984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 88
               

               Conread position:
               180-515
               

               Cow position:
               chr5:48009664-48009978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               146, 43
               

               Conread position:
               180-515
               

               Cow position:
               chr5:50600263-50599928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 204
               

               Conread position:
               180-515
               

               Cow position:
               chr5:74581003-74580667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 14
               

               Conread position:
               181-328
               

               Cow position:
               chr5:51233808-51233957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               181-423
               

               Cow position:
               chr5:52138154-52137896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               181-505
               

               Cow position:
               chr5:16179307-16179644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               145, 69
               

               Conread position:
               181-515
               

               Cow position:
               chr5:40594826-40595132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               236, 65
               

               Conread position:
               182-329
               

               Cow position:
               chr5:42753111-42752966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               182-332
               

               Cow position:
               chr5:4981660-4981508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               65, 20
               

               Conread position:
               182-335
               

               Cow position:
               chr5:6707266-6707417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 61
               

               Conread position:
               182-359
               

               Cow position:
               chr5:16668908-16668725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               182-372
               

               Cow position:
               chr5:47743836-47743643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               63, 120
               

               Conread position:
               182-394
               

               Cow position:
               chr5:48867255-48867471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               182-468
               

               Cow position:
               chr5:17554820-17555113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 105
               

               Conread position:
               182-482
               

               Cow position:
               chr5:57526712-57527013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 121
               

               Conread position:
               182-488
               

               Cow position:
               chr5:64523649-64523969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               182-515
               

               Cow position:
               chr5:6503661-6504009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               51, 234
               

               Conread position:
               182-515
               

               Cow position:
               chr5:12673265-12673589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 160
               

               Conread position:
               182-515
               

               Cow position:
               chr5:17062864-17063220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               66, 201
               

               Conread position:
               182-515
               

               Cow position:
               chr5:55232608-55232922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               182-515
               

               Cow position:
               chr5:55942162-55942525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 176
               

               Conread position:
               182-515
               

               Cow position:
               chr5:60209931-60210265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               43, 223
               

               Conread position:
               183-328
               

               Cow position:
               chr5:56754146-56753995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               59, 91
               

               Conread position:
               183-329
               

               Cow position:
               chr5:54753035-54753190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               183-335
               

               Cow position:
               chr5:50087982-50087822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               183-379
               

               Cow position:
               chr5:53980538-53980746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               65, 175
               

               Conread position:
               183-397
               

               Cow position:
               chr5:38717509-38717300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               147, 58
               

               Conread position:
               183-433
               

               Cow position:
               chr5:49501604-49501870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               65, 221
               

               Conread position:
               183-475
               

               Cow position:
               chr5:66551678-66551991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 292
               

               Conread position:
               183-477
               

               Cow position:
               chr5:63234609-63234920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               56, 158
               

               Conread position:
               183-502
               

               Cow position:
               chr5:68719081-68718760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 36
               

               Conread position:
               183-515
               

               Cow position:
               chr5:45397779-45397449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               184-314
               

               Cow position:
               chr5:63079802-63079663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               184-328
               

               Cow position:
               chr5:53795234-53795087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 67
               

               Conread position:
               184-503
               

               Cow position:
               chr5:12351599-12351905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 83
               

               Conread position:
               184-509
               

               Cow position:
               chr5:3003119-3002795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               63, 110
               

               Conread position:
               184-515
               

               Cow position:
               chr5:66815378-66815702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               137, 12
               

               Conread position:
               185-329
               

               Cow position:
               chr5:50525732-50525586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               63, 89
               

               Conread position:
               185-331
               

               Cow position:
               chr5:38040356-38040505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               185-435
               

               Cow position:
               chr5:72006285-72006540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               66, 20
               

               Conread position:
               185-500
               

               Cow position:
               chr5:29352920-29353242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               68, 93
               

               Conread position:
               185-515
               

               Cow position:
               chr5:26097502-26097166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               53, 150
               

               Conread position:
               185-515
               

               Cow position:
               chr5:37646287-37645948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               68, 50
               

               Conread position:
               187-314
               

               Cow position:
               chr5:4864745-4864619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 63
               

               Conread position:
               187-319
               

               Cow position:
               chr5:69427251-69427382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               187-387
               

               Cow position:
               chr5:21223519-21223324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               35, 9
               

               Conread position:
               187-501
               

               Cow position:
               chr5:15721878-15722181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 18
               

               Conread position:
               187-516
               

               Cow position:
               chr5:6286238-6286554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               188-327
               

               Cow position:
               chr5:66858566-66858702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               188-329
               

               Cow position:
               chr5:25598038-25597893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               188-373
               

               Cow position:
               chr5:44196721-44196915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               60, 169
               

               Conread position:
               188-400
               

               Cow position:
               chr5:16939383-16939608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               60, 170
               

               Conread position:
               188-506
               

               Cow position:
               chr5:35826807-35826483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 79
               

               Conread position:
               188-515
               

               Cow position:
               chr5:17767944-17768272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               56, 21
               

               Conread position:
               189-515
               

               Cow position:
               chr5:65753068-65752727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               191-326
               

               Cow position:
               chr5:51125812-51125945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               191-373
               

               Cow position:
               chr5:46704094-46704285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               191-506
               

               Cow position:
               chr5:57419590-57419913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               58, 209
               

               Conread position:
               193-515
               

               Cow position:
               chr5:66366713-66366389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 254
               

               Conread position:
               194-514
               

               Cow position:
               chr5:64026812-64027136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 214
               

               Conread position:
               194-515
               

               Cow position:
               chr5:48829358-48829029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               44, 92
               

               Conread position:
               195-427
               

               Cow position:
               chr5:55795768-55796004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               53, 200
               

               Conread position:
               195-465
               

               Cow position:
               chr5:69636411-69636156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               128, 34
               

               Conread position:
               196-423
               

               Cow position:
               chr5:57686540-57686776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               196-433
               

               Cow position:
               chr5:12247540-12247791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 104
               

               Conread position:
               198-505
               

               Cow position:
               chr5:54350172-54350487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               124, 44
               

               Conread position:
               200-328
               

               Cow position:
               chr5:47335222-47335091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               200-332
               

               Cow position:
               chr5:65050022-65050154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               125, 50
               

               Conread position:
               201-376
               

               Cow position:
               chr5:38169089-38168905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               201-427
               

               Cow position:
               chr5:71724485-71724261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               148, 41
               

               Conread position:
               201-505
               

               Cow position:
               chr5:43737780-43738072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               209, 56
               

               Conread position:
               201-515
               

               Cow position:
               chr5:69461531-69461205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 104
               

               Conread position:
               203-398
               

               Cow position:
               chr5:56334326-56334520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               191, 46
               

               Conread position:
               203-515
               

               Cow position:
               chr5:22643050-22643347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               290, 36
               

               Conread position:
               203-515
               

               Cow position:
               chr5:69731683-69731384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 36
               

               Conread position:
               208-505
               

               Cow position:
               chr5:72564938-72564641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               114, 30
               

               Conread position:
               209-499
               

               Cow position:
               chr5:76366116-76366405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               112, 40
               

               Conread position:
               210-383
               

               Cow position:
               chr5:17604949-17605130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               210-515
               

               Cow position:
               chr5:74858755-74858444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               212-405
               

               Cow position:
               chr5:60668883-60668681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               111, 35
               

               Conread position:
               213-496
               

               Cow position:
               chr5:60183984-60183691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               213-515
               

               Cow position:
               chr5:7193597-7193302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               216-515
               

               Cow position:
               chr5:6683196-6683484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               203, 18
               

               Conread position:
               217-515
               

               Cow position:
               chr5:42777929-42777633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 70
               

               Conread position:
               218-328
               

               Cow position:
               chr5:29979785-29979896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               218-392
               

               Cow position:
               chr5:65679794-65679975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               220-342
               

               Cow position:
               chr5:27611608-27611728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               226-515
               

               Cow position:
               chr5:37646377-37646675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 74
               

               Conread position:
               228-490
               

               Cow position:
               chr5:54375342-54375611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 15
               

               Conread position:
               229-390
               

               Cow position:
               chr5:24069551-24069387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               118, 102
               

               Conread position:
               229-503
               

               Cow position:
               chr5:53710525-53710811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               20, 126
               

               Conread position:
               230-429
               

               Cow position:
               chr5:49341886-49342090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               20, 193
               

               Conread position:
               230-446
               

               Cow position:
               chr5:63059222-63059009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               21, 102
               

               Conread position:
               230-506
               

               Cow position:
               chr5:64591936-64592212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 19
               

               Conread position:
               230-512
               

               Cow position:
               chr5:43457370-43457642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               21, 149
               

               Conread position:
               230-515
               

               Cow position:
               chr5:4709993-4710274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               100, 21
               

               Conread position:
               232-481
               

               Cow position:
               chr5:62378939-62378696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 139
               

               Conread position:
               232-515
               

               Cow position:
               chr5:4219013-4218746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               196, 23
               

               Conread position:
               232-515
               

               Cow position:
               chr5:25230860-25231133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               14, 54
               

               Conread position:
               233-371
               

               Cow position:
               chr5:5847688-5847829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 117
               

               Conread position:
               234-515
               

               Cow position:
               chr5:20783776-20783495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               234-515
               

               Cow position:
               chr5:60715211-60715490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 114
               

               Conread position:
               235-385
               

               Cow position:
               chr5:26253021-26253171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               87, 22
               

               Conread position:
               235-515
               

               Cow position:
               chr5:45273348-45273630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               95, 15
               

               Conread position:
               236-364
               

               Cow position:
               chr5:60595975-60596108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               236-503
               

               Cow position:
               chr5:39258657-39258406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               238, 11
               

               Conread position:
               236-512
               

               Cow position:
               chr5:64758614-64758896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               93, 23
               

               Conread position:
               236-513
               

               Cow position:
               chr5:21039828-21040103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               12, 74
               

               Conread position:
               236-515
               

               Cow position:
               chr5:63865961-63865666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               220
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               237-328
               

               Cow position:
               chr5:48820883-48820791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               237-332
               

               Cow position:
               chr5:14354229-14354133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               237-339
               

               Cow position:
               chr5:60126844-60126738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               237-376
               

               Cow position:
               chr5:35647495-35647354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               85, 14
               

               Conread position:
               237-390
               

               Cow position:
               chr5:33155967-33155812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               237-390
               

               Cow position:
               chr5:55129495-55129340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               95, 12
               

               Conread position:
               237-392
               

               Cow position:
               chr5:44874344-44874188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 12
               

               Conread position:
               237-396
               

               Cow position:
               chr5:9369119-9369279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               92, 20
               

               Conread position:
               237-412
               

               Cow position:
               chr5:61875689-61875519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               237-429
               

               Cow position:
               chr5:17602051-17602242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               14, 104
               

               Conread position:
               237-434
               

               Cow position:
               chr5:24136868-24136667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               237-434
               

               Cow position:
               chr5:58555291-58555094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 167
               

               Conread position:
               237-437
               

               Cow position:
               chr5:56338867-56339069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               14, 161
               

               Conread position:
               237-447
               

               Cow position:
               chr5:57230185-57230401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               237-456
               

               Cow position:
               chr5:29912573-29912349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               86, 46
               

               Conread position:
               237-466
               

               Cow position:
               chr5:31640575-31640340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               237-477
               

               Cow position:
               chr5:55019447-55019205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 114
               

               Conread position:
               237-492
               

               Cow position:
               chr5:41294233-41293974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 12
               

               Conread position:
               237-496
               

               Cow position:
               chr5:23678549-23678814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               237-498
               

               Cow position:
               chr5:58446960-58446691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               85, 165
               

               Conread position:
               237-499
               

               Cow position:
               chr5:60599053-60599298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               237-503
               

               Cow position:
               chr5:14473249-14473534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 116
               

               Conread position:
               237-505
               

               Cow position:
               chr5:26476864-26477131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 125
               

               Conread position:
               237-505
               

               Cow position:
               chr5:49440724-49440991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 12
               

               Conread position:
               237-505
               

               Cow position:
               chr5:61810925-61810668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               14, 95
               

               Conread position:
               237-511
               

               Cow position:
               chr5:46509712-46509991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               237-512
               

               Cow position:
               chr5:53855860-53855568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 166
               

               Conread position:
               237-512
               

               Cow position:
               chr5:59115533-59115255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               116, 39
               

               Conread position:
               237-515
               

               Cow position:
               chr5:458642-458353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 75
               

               Conread position:
               237-515
               

               Cow position:
               chr5:4166792-4166533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               86, 12
               

               Conread position:
               237-515
               

               Cow position:
               chr5:9089874-9090149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               237-515
               

               Cow position:
               chr5:23168672-23168954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 226
               

               Conread position:
               237-515
               

               Cow position:
               chr5:30949761-30950045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               237-515
               

               Cow position:
               chr5:43929582-43929865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               237-515
               

               Cow position:
               chr5:44752153-44752440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               21, 194
               

               Conread position:
               237-515
               

               Cow position:
               chr5:54060432-54060148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               17, 280
               

               Conread position:
               237-515
               

               Cow position:
               chr5:54311490-54311203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               14, 116
               

               Conread position:
               237-515
               

               Cow position:
               chr5:58856256-58855974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               18, 83
               

               Conread position:
               237-518
               

               Cow position:
               chr5:44726177-44726458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               13, 145
               

               Conread position:
               237-521
               

               Cow position:
               chr5:19524056-19523761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 115
               

               Conread position:
               238-339
               

               Cow position:
               chr5:1090671-1090771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               238-367
               

               Cow position:
               chr5:55850033-55849905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               238-389
               

               Cow position:
               chr5:9170429-9170583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               238-417
               

               Cow position:
               chr5:41981521-41981342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               13, 95
               

               Conread position:
               238-434
               

               Cow position:
               chr5:40242195-40241996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               85, 62
               

               Conread position:
               238-482
               

               Cow position:
               chr5:59872927-59873186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 250
               

               Conread position:
               238-484
               

               Cow position:
               chr5:67212513-67212258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               238-495
               

               Cow position:
               chr5:35126206-35125945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               91, 11
               

               Conread position:
               238-504
               

               Cow position:
               chr5:16206002-16206273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               13, 108
               

               Conread position:
               238-505
               

               Cow position:
               chr5:4031835-4032113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               74, 11
               

               Conread position:
               238-515
               

               Cow position:
               chr5:41545740-41546018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 176
               

               Conread position:
               238-515
               

               Cow position:
               chr5:63426852-63427135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               7, 263
               

               Conread position:
               239-390
               

               Cow position:
               chr5:57489799-57489948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               239-505
               

               Cow position:
               chr5:45574772-45574497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               9, 273
               

               Conread position:
               240-396
               

               Cow position:
               chr5:9233839-9234000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               34, 9
               

               Conread position:
               240-440
               

               Cow position:
               chr5:35982586-35982793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               240-477
               

               Cow position:
               chr5:54086689-54086452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               11, 112
               

               Conread position:
               240-513
               

               Cow position:
               chr5:4221128-4220857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               85, 111
               

               Conread position:
               240-514
               

               Cow position:
               chr5:6045447-6045163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               240-515
               

               Cow position:
               chr5:5110920-5111202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               240-515
               

               Cow position:
               chr5:50533237-50533516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 85
               

               Conread position:
               240-515
               

               Cow position:
               chr5:54767760-54768039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               82, 9
               

               Conread position:
               240-515
               

               Cow position:
               chr5:56317440-56317169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               11, 89
               

               Conread position:
               240-515
               

               Cow position:
               chr5:63987296-63987580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               82, 200
               

               Conread position:
               241-359
               

               Cow position:
               chr5:29149036-29148919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               241-515
               

               Cow position:
               chr5:74016088-74015811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               97, 10
               

               Conread position:
               242-499
               

               Cow position:
               chr5:13717424-13717684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               92, 9
               

               Conread position:
               242-515
               

               Cow position:
               chr5:34301065-34300787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               17, 97
               

               Conread position:
               242-515
               

               Cow position:
               chr5:44993902-44994167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               174, 7
               

               Conread position:
               242-515
               

               Cow position:
               chr5:46425707-46425980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               37, 30
               

               Conread position:
               242-515
               

               Cow position:
               chr5:67244067-67243800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 94
               

               Conread position:
               243-430
               

               Cow position:
               chr5:56212052-56211859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               243-477
               

               Cow position:
               chr5:26094018-26094253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               8, 91
               

               Conread position:
               243-504
               

               Cow position:
               chr5:37808517-37808794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               82, 6
               

               Conread position:
               244-476
               

               Cow position:
               chr5:47323607-47323375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               85, 5
               

               Conread position:
               244-505
               

               Cow position:
               chr5:27306450-27306201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               86, 118
               

               Conread position:
               245-433
               

               Cow position:
               chr5:56517249-56517057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               245-500
               

               Cow position:
               chr5:3639353-3639606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               169, 5
               

               Conread position:
               246-515
               

               Cow position:
               chr5:50821926-50821653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 11
               

               Conread position:
               248-437
               

               Cow position:
               chr5:63150026-63150218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               11, 93
               

               Conread position:
               248-453
               

               Cow position:
               chr5:26150280-26150488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               81, 15
               

               Conread position:
               248-515
               

               Cow position:
               chr5:14629663-14629942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               249-389
               

               Cow position:
               chr5:45126793-45126649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               249-484
               

               Cow position:
               chr5:15479266-15479028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               80, 34
               

               Conread position:
               249-497
               

               Cow position:
               chr5:20422053-20422295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 8
               

               Conread position:
               249-498
               

               Cow position:
               chr5:7698141-7697893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 52
               

               Conread position:
               249-515
               

               Cow position:
               chr5:7755430-7755691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               81, 18
               

               Conread position:
               249-515
               

               Cow position:
               chr5:34528687-34528432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               250, 27
               

               Conread position:
               249-515
               

               Cow position:
               chr5:57737240-57736981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               74, 138
               

               Conread position:
               249-516
               

               Cow position:
               chr5:29771669-29771388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 209
               

               Conread position:
               250-515
               

               Cow position:
               chr5:43992464-43992194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               72, 152
               

               Conread position:
               251-504
               

               Cow position:
               chr5:64823191-64823429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               149, 53
               

               Conread position:
               251-512
               

               Cow position:
               chr5:56680395-56680121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               251-515
               

               Cow position:
               chr5:8820874-8821137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 207
               

               Conread position:
               253-515
               

               Cow position:
               chr5:37814763-37814495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               73, 220
               

               Conread position:
               254-514
               

               Cow position:
               chr5:62142812-62142542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               254-516
               

               Cow position:
               chr5:57575909-57575639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               255-515
               

               Cow position:
               chr5:52000353-52000093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               152, 50
               

               Conread position:
               257-425
               

               Cow position:
               chr5:60189126-60188953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               73, 128
               

               Conread position:
               257-427
               

               Cow position:
               chr5:61102849-61102675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               73, 96
               

               Conread position:
               257-448
               

               Cow position:
               chr5:1461222-1461025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               71, 121
               

               Conread position:
               257-513
               

               Cow position:
               chr5:57626921-57626679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               94, 47
               

               Conread position:
               257-515
               

               Cow position:
               chr5:45804193-45803934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               257-515
               

               Cow position:
               chr5:63992039-63992292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               70, 145
               

               Conread position:
               258-501
               

               Cow position:
               chr5:27171861-27172095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               67, 87
               

               Conread position:
               258-515
               

               Cow position:
               chr5:15426670-15426400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               65, 94
               

               Conread position:
               260-423
               

               Cow position:
               chr5:45574235-45574399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 131
               

               Conread position:
               260-514
               

               Cow position:
               chr5:19813090-19813343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               68, 141
               

               Conread position:
               260-515
               

               Cow position:
               chr5:15598108-15598359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 40
               

               Conread position:
               260-515
               

               Cow position:
               chr5:28927464-28927718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               69, 93
               

               Conread position:
               262-381
               

               Cow position:
               chr5:12169641-12169762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               68, 90
               

               Conread position:
               263-432
               

               Cow position:
               chr5:33538001-33537824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 128
               

               Conread position:
               263-515
               

               Cow position:
               chr5:42744907-42744659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               267-515
               

               Cow position:
               chr5:67540078-67540332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               268-515
               

               Cow position:
               chr5:65588821-65588574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               151, 60
               

               Conread position:
               269-515
               

               Cow position:
               chr5:58793486-58793740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               54, 240
               

               Conread position:
               271-515
               

               Cow position:
               chr5:32696704-32696949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               59, 34
               

               Conread position:
               272-504
               

               Cow position:
               chr5:52644962-52645197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 129
               

               Conread position:
               272-515
               

               Cow position:
               chr5:20407560-20407796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               58, 108
               

               Conread position:
               273-515
               

               Cow position:
               chr5:59717853-59717619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 71
               

               Conread position:
               277-515
               

               Cow position:
               chr5:65883659-65883905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 70
               

               Conread position:
               290-514
               

               Cow position:
               chr5:34638983-34638756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 17
               

               Conread position:
               290-515
               

               Cow position:
               chr5:69520991-69520764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 133
               

               Conread position:
               292-504
               

               Cow position:
               chr5:16509204-16508977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               294-515
               

               Cow position:
               chr5:56820168-56820391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               121, 55
               

               Conread position:
               305-515
               

               Cow position:
               chr5:31144702-31144916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               17, 179
               

               Conread position:
               315-513
               

               Cow position:
               chr5:6670118-6670321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 132
               

               Conread position:
               321-514
               

               Cow position:
               chr5:3668964-3668773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               156, 92
               

               Conread position:
               324-508
               

               Cow position:
               chr5:50799597-50799418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               324-514
               

               Cow position:
               chr5:21964352-21964157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               95, 68
               

               Conread position:
               332-515
               

               Cow position:
               chr5:60126430-60126244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 156
               

               Conread position:
               338-515
               

               Cow position:
               chr5:1779234-1779400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               349-515
               

               Cow position:
               chr5:62826714-62826883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               351-515
               

               Cow position:
               chr5:6086524-6086687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               351-515
               

               Cow position:
               chr5:27015716-27015555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               351-515
               

               Cow position:
               chr5:38647391-38647230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               68, 41
               

               Conread position:
               352-505
               

               Cow position:
               chr5:24485399-24485555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               58, 112
               

               Conread position:
               352-515
               

               Cow position:
               chr5:8994530-8994695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 46
               

               Conread position:
               353-515
               

               Cow position:
               chr5:9859678-9859842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 9
               

               Conread position:
               353-515
               

               Cow position:
               chr5:19470156-19470312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               354-515
               

               Cow position:
               chr5:34288435-34288596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               42, 134
               

               Conread position:
               355-515
               

               Cow position:
               chr5:32956062-32956225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               355-515
               

               Cow position:
               chr5:51357469-51357629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               358-515
               

               Cow position:
               chr5:17644625-17644785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 41
               

               Conread position:
               362-515
               

               Cow position:
               chr5:59443223-59443377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 77
               
Show alignments to all cow chromosomes.
Conread position:	108-397
Cow position:	chr5:41403309-41403582 (view UCSC Genome Browser custom track)
Alignm length:	298
Alignm identity:	209
Alignm E-value:	8e-25
Alignm gaps (pig, cow):	31, 18
Conread position:	121-501
Cow position:	chr5:14903790-14904191 (view UCSC Genome Browser custom track)
Alignm length:	407
Alignm identity:	272
Alignm E-value:	7e-34
Alignm gaps (pig, cow):	57, 29
Conread position:	141-512
Cow position:	chr5:58675-59055 (view UCSC Genome Browser custom track)
Alignm length:	389
Alignm identity:	262
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	105, 15
Conread position:	142-328
Cow position:	chr5:25462340-25462150 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	145
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	34, 0
Conread position:	142-515
Cow position:	chr5:11426977-11427367 (view UCSC Genome Browser custom track)
Alignm length:	398
Alignm identity:	270
Alignm E-value:	8e-36
Alignm gaps (pig, cow):	23, 64
Conread position:	143-515
Cow position:	chr5:34562262-34561883 (view UCSC Genome Browser custom track)
Alignm length:	384
Alignm identity:	289
Alignm E-value:	0
Alignm gaps (pig, cow):	108, 29
Conread position:	144-387
Cow position:	chr5:44163120-44163369 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	169
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	76, 108
Conread position:	144-505
Cow position:	chr5:32975308-32975672 (view UCSC Genome Browser custom track)
Alignm length:	377
Alignm identity:	254
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	9, 25
Conread position:	145-324
Cow position:	chr5:30221528-30221712 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	136
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	92, 18
Conread position:	145-515
Cow position:	chr5:51053395-51053777 (view UCSC Genome Browser custom track)
Alignm length:	388
Alignm identity:	270
Alignm E-value:	0
Alignm gaps (pig, cow):	29, 247
Conread position:	147-477
Cow position:	chr5:43391274-43390941 (view UCSC Genome Browser custom track)
Alignm length:	340
Alignm identity:	227
Alignm E-value:	5e-32
Alignm gaps (pig, cow):	169, 8
Conread position:	147-515
Cow position:	chr5:8023966-8024324 (view UCSC Genome Browser custom track)
Alignm length:	374
Alignm identity:	263
Alignm E-value:	0
Alignm gaps (pig, cow):	264, 25
Conread position:	148-298
Cow position:	chr5:49508549-49508706 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	120
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	31, 18
Conread position:	148-328
Cow position:	chr5:70572606-70572433 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	138
Alignm E-value:	5e-31
Alignm gaps (pig, cow):	24, 0
Conread position:	148-359
Cow position:	chr5:36823120-36822915 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	159
Alignm E-value:	5e-32
Alignm gaps (pig, cow):	10, 56
Conread position:	148-515
Cow position:	chr5:44028059-44028430 (view UCSC Genome Browser custom track)
Alignm length:	382
Alignm identity:	282
Alignm E-value:	0
Alignm gaps (pig, cow):	8, 50
Conread position:	150-287
Cow position:	chr5:20736631-20736774 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	112
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	27, 10
Conread position:	150-318
Cow position:	chr5:46715730-46715553 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	130
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	87, 133
Conread position:	150-372
Cow position:	chr5:56525464-56525691 (view UCSC Genome Browser custom track)
Alignm length:	232
Alignm identity:	162
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	100, 13
Conread position:	151-316
Cow position:	chr5:17537433-17537599 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	135
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	100, 0