• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ova1-OVRM10096F06
        

               
Conread position:
               
113-497
               

               
Cow position:
               
chr12:33976415-33976027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 13
               

               
Conread position:
               
130-479
               

               
Cow position:
               
chr12:23446916-23446567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
130-568
               

               
Cow position:
               
chr12:1889385-1889817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
132-630
               

               
Cow position:
               
chr12:30919628-30919137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 363
               

               
Conread position:
               
134-433
               

               
Cow position:
               
chr12:30413763-30414057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
143-638
               

               
Cow position:
               
chr12:16360052-16359567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
144-626
               

               
Cow position:
               
chr12:19714879-19715322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
235, 48
               

               
Conread position:
               
145-602
               

               
Cow position:
               
chr12:28559458-28559024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 24
               

               
Conread position:
               
150-568
               

               
Cow position:
               
chr12:20071394-20071822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
157-528
               

               
Cow position:
               
chr12:4769087-4768726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 13
               

               
Conread position:
               
157-638
               

               
Cow position:
               
chr12:11057035-11056571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
158-630
               

               
Cow position:
               
chr12:35770856-35771332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
159-373
               

               
Cow position:
               
chr12:48579002-48578795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
159-388
               

               
Cow position:
               
chr12:40881757-40881973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
159-434
               

               
Cow position:
               
chr12:35240937-35241213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
159-538
               

               
Cow position:
               
chr12:36544478-36544859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
191, 72
               

               
Conread position:
               
159-624
               

               
Cow position:
               
chr12:27802894-27803342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 10
               

               
Conread position:
               
159-630
               

               
Cow position:
               
chr12:18420755-18421225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
159-630
               

               
Cow position:
               
chr12:25561533-25561072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 99
               

               
Conread position:
               
159-631
               

               
Cow position:
               
chr12:40910119-40910590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
159-633
               

               
Cow position:
               
chr12:44622527-44622057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
72, 180
               

               
Conread position:
               
159-635
               

               
Cow position:
               
chr12:18123833-18123383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
318, 73
               

               
Conread position:
               
159-646
               

               
Cow position:
               
chr12:41159747-41159282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
230, 11
               

               
Conread position:
               
159-659
               

               
Cow position:
               
chr12:17031775-17031292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
160-440
               

               
Cow position:
               
chr12:31269324-31269034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
160-470
               

               
Cow position:
               
chr12:16670431-16670119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
160-473
               

               
Cow position:
               
chr12:7110374-7110051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 236
               

               
Conread position:
               
160-603
               

               
Cow position:
               
chr12:21393876-21393433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
160-625
               

               
Cow position:
               
chr12:36012446-36012902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
70, 129
               

               
Conread position:
               
161-327
               

               
Cow position:
               
chr12:20654316-20654480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 72
               

               
Conread position:
               
161-359
               

               
Cow position:
               
chr12:6958384-6958185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
161-387
               

               
Cow position:
               
chr12:40157863-40158084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
161-389
               

               
Cow position:
               
chr12:24181308-24181085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
161-433
               

               
Cow position:
               
chr12:23939384-23939114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
73, 119
               

               
Conread position:
               
161-452
               

               
Cow position:
               
chr12:1333382-1333100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
225, 71
               

               
Conread position:
               
161-453
               

               
Cow position:
               
chr12:37008545-37008833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 70
               

               
Conread position:
               
161-479
               

               
Cow position:
               
chr12:12301092-12300766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 244
               

               
Conread position:
               
161-479
               

               
Cow position:
               
chr12:46120652-46120985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
161-484
               

               
Cow position:
               
chr12:37169784-37170104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
161-489
               

               
Cow position:
               
chr12:42163207-42162872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
161-491
               

               
Cow position:
               
chr12:42879864-42879527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
70, 270
               

               
Conread position:
               
161-499
               

               
Cow position:
               
chr12:32051685-32051334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 116
               

               
Conread position:
               
161-544
               

               
Cow position:
               
chr12:33851521-33851142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 169
               

               
Conread position:
               
161-560
               

               
Cow position:
               
chr12:30210635-30210247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
161-566
               

               
Cow position:
               
chr12:4162208-4162606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
143, 69
               

               
Conread position:
               
161-568
               

               
Cow position:
               
chr12:34161568-34161180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
161-626
               

               
Cow position:
               
chr12:9914946-9914494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 53
               

               
Conread position:
               
161-626
               

               
Cow position:
               
chr12:20776764-20777224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 70
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr12:6241489-6241010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 276
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr12:9229351-9229781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 53
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr12:30745881-30745414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 178
               

               
Conread position:
               
161-631
               

               
Cow position:
               
chr12:41084210-41083766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
316, 30
               

               
Conread position:
               
161-634
               

               
Cow position:
               
chr12:34007464-34006996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
161-636
               

               
Cow position:
               
chr12:18518837-18518366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 291
               

               
Conread position:
               
162-466
               

               
Cow position:
               
chr12:29674976-29675279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr12:19258440-19258125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
162-565
               

               
Cow position:
               
chr12:1031128-1030746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 88
               

               
Conread position:
               
162-604
               

               
Cow position:
               
chr12:34465854-34466275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 69
               

               
Conread position:
               
162-626
               

               
Cow position:
               
chr12:11836392-11835947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
230, 31
               

               
Conread position:
               
163-393
               

               
Cow position:
               
chr12:15389233-15389003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
163-412
               

               
Cow position:
               
chr12:13911413-13911666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
137, 68
               

               
Conread position:
               
163-417
               

               
Cow position:
               
chr12:6688048-6687798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
163-426
               

               
Cow position:
               
chr12:18103454-18103713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
224, 68
               

               
Conread position:
               
163-445
               

               
Cow position:
               
chr12:38126358-38126648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
163-446
               

               
Cow position:
               
chr12:25280340-25280626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
163-448
               

               
Cow position:
               
chr12:14223146-14222852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
163-452
               

               
Cow position:
               
chr12:25193204-25192924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
238, 68
               

               
Conread position:
               
163-454
               

               
Cow position:
               
chr12:10763409-10763134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
163-479
               

               
Cow position:
               
chr12:12637022-12637340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
163-479
               

               
Cow position:
               
chr12:13988537-13988216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 251
               

               
Conread position:
               
163-483
               

               
Cow position:
               
chr12:23836497-23836164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
163-490
               

               
Cow position:
               
chr12:25989052-25989362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
309, 34
               

               
Conread position:
               
163-493
               

               
Cow position:
               
chr12:4720107-4719775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
230, 91
               

               
Conread position:
               
163-554
               

               
Cow position:
               
chr12:4596636-4596226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 243
               

               
Conread position:
               
163-562
               

               
Cow position:
               
chr12:24663284-24662884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
22, 252
               

               
Conread position:
               
163-622
               

               
Cow position:
               
chr12:15938107-15938558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
163-624
               

               
Cow position:
               
chr12:5714781-5714336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 67
               

               
Conread position:
               
163-626
               

               
Cow position:
               
chr12:35368807-35368348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 96
               

               
Conread position:
               
163-630
               

               
Cow position:
               
chr12:22515575-22516035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
233, 91
               

               
Conread position:
               
165-463
               

               
Cow position:
               
chr12:17269964-17269660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
165-626
               

               
Cow position:
               
chr12:8943054-8943515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 220
               

               
Conread position:
               
166-370
               

               
Cow position:
               
chr12:26147008-26147215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
166-540
               

               
Cow position:
               
chr12:7299311-7299680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
166-575
               

               
Cow position:
               
chr12:35669312-35669709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
167-479
               

               
Cow position:
               
chr12:3623850-3623539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 64
               

               
Conread position:
               
167-588
               

               
Cow position:
               
chr12:5635293-5635705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 221
               

               
Conread position:
               
168-474
               

               
Cow position:
               
chr12:26576050-26575735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
204, 86
               

               
Conread position:
               
168-475
               

               
Cow position:
               
chr12:10942452-10942138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 300
               

               
Conread position:
               
168-476
               

               
Cow position:
               
chr12:26217669-26217978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
168-626
               

               
Cow position:
               
chr12:4341577-4342016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 233
               

               
Conread position:
               
169-369
               

               
Cow position:
               
chr12:3586271-3586074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
169-390
               

               
Cow position:
               
chr12:29057547-29057324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
169-402
               

               
Cow position:
               
chr12:33949057-33948828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
169-432
               

               
Cow position:
               
chr12:42286121-42285860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
221, 41
               

               
Conread position:
               
169-442
               

               
Cow position:
               
chr12:26749793-26750077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
169-449
               

               
Cow position:
               
chr12:16056698-16056985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
169-451
               

               
Cow position:
               
chr12:7884523-7884809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
169-455
               

               
Cow position:
               
chr12:24152499-24152206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 226
               

               
Conread position:
               
169-459
               

               
Cow position:
               
chr12:4954978-4954695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
210, 84
               

               
Conread position:
               
169-478
               

               
Cow position:
               
chr12:11587926-11587619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 30
               

               
Conread position:
               
169-481
               

               
Cow position:
               
chr12:22284965-22285277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
169-490
               

               
Cow position:
               
chr12:6242018-6242343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 225
               

               
Conread position:
               
169-490
               

               
Cow position:
               
chr12:42784464-42784140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
158, 41
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr12:17879148-17879473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
237, 85
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr12:38774088-38774410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 89
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr12:42684778-42685117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
169-584
               

               
Cow position:
               
chr12:35779763-35780180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
80, 120
               

               
Conread position:
               
169-607
               

               
Cow position:
               
chr12:9482145-9482575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 111
               

               
Conread position:
               
169-607
               

               
Cow position:
               
chr12:34333273-34332830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
169-607
               

               
Cow position:
               
chr12:36500790-36501229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 224
               

               
Conread position:
               
169-618
               

               
Cow position:
               
chr12:37728286-37727860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 62
               

               
Conread position:
               
169-618
               

               
Cow position:
               
chr12:37732639-37733064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 61
               

               
Conread position:
               
169-622
               

               
Cow position:
               
chr12:32169703-32169245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 43
               

               
Conread position:
               
169-626
               

               
Cow position:
               
chr12:17882012-17881577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 58
               

               
Conread position:
               
169-626
               

               
Cow position:
               
chr12:30806010-30805560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
169-629
               

               
Cow position:
               
chr12:9710048-9710502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 233
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr12:35310525-35310972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 140
               

               
Conread position:
               
169-636
               

               
Cow position:
               
chr12:15089673-15089186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
33, 38
               

               
Conread position:
               
170-357
               

               
Cow position:
               
chr12:38804446-38804622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
170-370
               

               
Cow position:
               
chr12:43855046-43854849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
170-390
               

               
Cow position:
               
chr12:29966261-29966042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 163
               

               
Conread position:
               
170-469
               

               
Cow position:
               
chr12:3371698-3372004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
170-475
               

               
Cow position:
               
chr12:24032644-24032350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
170-489
               

               
Cow position:
               
chr12:15050469-15050784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
170-626
               

               
Cow position:
               
chr12:27563223-27563672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
170-631
               

               
Cow position:
               
chr12:17080422-17079958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 265
               

               
Conread position:
               
170-646
               

               
Cow position:
               
chr12:30590925-30590462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
171-479
               

               
Cow position:
               
chr12:7960431-7960731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
181, 14
               

               
Conread position:
               
171-630
               

               
Cow position:
               
chr12:42160402-42160852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 204
               

               
Conread position:
               
171-646
               

               
Cow position:
               
chr12:48415365-48415826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 35
               

               
Conread position:
               
172-477
               

               
Cow position:
               
chr12:31517030-31517320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
214, 7
               

               
Conread position:
               
173-442
               

               
Cow position:
               
chr12:21780317-21780046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
173-565
               

               
Cow position:
               
chr12:24023658-24024026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
175-389
               

               
Cow position:
               
chr12:6754341-6754132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
176-486
               

               
Cow position:
               
chr12:36790663-36790974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
55, 80
               

               
Conread position:
               
176-626
               

               
Cow position:
               
chr12:6410586-6411023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
177-414
               

               
Cow position:
               
chr12:3616132-3615910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
214, 54
               

               
Conread position:
               
177-493
               

               
Cow position:
               
chr12:15122474-15122150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
105, 97
               

               
Conread position:
               
177-539
               

               
Cow position:
               
chr12:30194842-30194498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
253, 19
               

               
Conread position:
               
177-581
               

               
Cow position:
               
chr12:23574919-23574520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
54, 249
               

               
Conread position:
               
177-634
               

               
Cow position:
               
chr12:31532260-31532704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
208, 19
               

               
Conread position:
               
178-493
               

               
Cow position:
               
chr12:23916987-23916672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
178-596
               

               
Cow position:
               
chr12:42282691-42283102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
140, 77
               

               
Conread position:
               
178-636
               

               
Cow position:
               
chr12:42180980-42181446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 341
               

               
Conread position:
               
179-366
               

               
Cow position:
               
chr12:18130658-18130475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
164, 52
               

               
Conread position:
               
187-644
               

               
Cow position:
               
chr12:4866953-4866501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 44
               

               
Conread position:
               
195-636
               

               
Cow position:
               
chr12:42254800-42254351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 164
               

               
Conread position:
               
200-607
               

               
Cow position:
               
chr12:30661823-30662226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
32, 210
               

               
Conread position:
               
201-630
               

               
Cow position:
               
chr12:33323369-33323797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 289
               

               
Conread position:
               
214-636
               

               
Cow position:
               
chr12:5631770-5632179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 117
               

               
Conread position:
               
217-630
               

               
Cow position:
               
chr12:42167740-42167347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
219-479
               

               
Cow position:
               
chr12:4821067-4820801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
230-659
               

               
Cow position:
               
chr12:6210063-6210482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 219
               

               
Conread position:
               
232-467
               

               
Cow position:
               
chr12:15700174-15699931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
233-416
               

               
Cow position:
               
chr12:7854117-7854299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
235-490
               

               
Cow position:
               
chr12:42234147-42233889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
117, 10
               

               
Conread position:
               
235-493
               

               
Cow position:
               
chr12:46333434-46333183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
242, 38
               

               
Conread position:
               
238-637
               

               
Cow position:
               
chr12:19866328-19865936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
242-519
               

               
Cow position:
               
chr12:25188271-25187994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
100, 235
               

               
Conread position:
               
242-607
               

               
Cow position:
               
chr12:18388208-18388558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
242-636
               

               
Cow position:
               
chr12:47804239-47803850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 61
               

               
Conread position:
               
244-400
               

               
Cow position:
               
chr12:4793278-4793122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
244-636
               

               
Cow position:
               
chr12:29969660-29969274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 168
               

               
Conread position:
               
246-473
               

               
Cow position:
               
chr12:24116284-24116513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
246-630
               

               
Cow position:
               
chr12:18572702-18572339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
246-636
               

               
Cow position:
               
chr12:31959957-31959588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 12
               

               
Conread position:
               
247-451
               

               
Cow position:
               
chr12:14131692-14131890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 78
               

               
Conread position:
               
247-479
               

               
Cow position:
               
chr12:46714447-46714218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
247-489
               

               
Cow position:
               
chr12:34473547-34473790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
119, 64
               

               
Conread position:
               
247-490
               

               
Cow position:
               
chr12:28582432-28582671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
149, 27
               

               
Conread position:
               
247-491
               

               
Cow position:
               
chr12:20479260-20479493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
137, 83
               

               
Conread position:
               
247-493
               

               
Cow position:
               
chr12:7000527-7000775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
147, 40
               

               
Conread position:
               
247-512
               

               
Cow position:
               
chr12:45090274-45090547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
138, 63
               

               
Conread position:
               
247-559
               

               
Cow position:
               
chr12:27037372-27037677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
247-568
               

               
Cow position:
               
chr12:5940419-5940106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
98, 156
               

               
Conread position:
               
247-601
               

               
Cow position:
               
chr12:25177520-25177864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
230, 101
               

               
Conread position:
               
247-604
               

               
Cow position:
               
chr12:44595732-44596087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 250
               

               
Conread position:
               
247-605
               

               
Cow position:
               
chr12:29779836-29780176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
290, 146
               

               
Conread position:
               
247-607
               

               
Cow position:
               
chr12:25320992-25320647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
229, 63
               

               
Conread position:
               
247-619
               

               
Cow position:
               
chr12:44517660-44518023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 149
               

               
Conread position:
               
247-622
               

               
Cow position:
               
chr12:7978115-7977756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
146, 83
               

               
Conread position:
               
247-623
               

               
Cow position:
               
chr12:11109832-11109478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
247-626
               

               
Cow position:
               
chr12:15173901-15173524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
247-626
               

               
Cow position:
               
chr12:41581189-41580822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr12:30438315-30437952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 79
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr12:37993654-37994024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 142
               

               
Conread position:
               
247-634
               

               
Cow position:
               
chr12:17001336-17000955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 132
               

               
Conread position:
               
247-644
               

               
Cow position:
               
chr12:6720405-6720011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
248-508
               

               
Cow position:
               
chr12:29921709-29921968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
248-535
               

               
Cow position:
               
chr12:25444991-25444714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
233, 124
               

               
Conread position:
               
248-604
               

               
Cow position:
               
chr12:18943583-18943917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
152, 8
               

               
Conread position:
               
248-625
               

               
Cow position:
               
chr12:3950268-3950645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 183
               

               
Conread position:
               
248-635
               

               
Cow position:
               
chr12:18020934-18020548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
147, 75
               

               
Conread position:
               
248-653
               

               
Cow position:
               
chr12:47929278-47928899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
8, 64
               

               
Conread position:
               
249-426
               

               
Cow position:
               
chr12:5680759-5680578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
249-485
               

               
Cow position:
               
chr12:41215809-41216046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
146, 81
               

               
Conread position:
               
249-489
               

               
Cow position:
               
chr12:15230741-15230981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
110, 28
               

               
Conread position:
               
249-490
               

               
Cow position:
               
chr12:27366002-27365759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 30
               

               
Conread position:
               
249-568
               

               
Cow position:
               
chr12:18765897-18766218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
129, 253
               

               
Conread position:
               
249-604
               

               
Cow position:
               
chr12:31429495-31429834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 95
               

               
Conread position:
               
249-609
               

               
Cow position:
               
chr12:12331434-12331779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
150, 106
               

               
Conread position:
               
249-626
               

               
Cow position:
               
chr12:3197344-3196958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
197, 74
               

               
Conread position:
               
249-626
               

               
Cow position:
               
chr12:25606782-25606396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
66, 229
               

               
Conread position:
               
249-630
               

               
Cow position:
               
chr12:30596544-30596164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 46
               

               
Conread position:
               
249-630
               

               
Cow position:
               
chr12:33458223-33457849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 87
               

               
Conread position:
               
249-633
               

               
Cow position:
               
chr12:31198843-31198466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 252
               

               
Conread position:
               
249-654
               

               
Cow position:
               
chr12:16543502-16543891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
250-434
               

               
Cow position:
               
chr12:18523644-18523453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
250-490
               

               
Cow position:
               
chr12:19507712-19507465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
132, 224
               

               
Conread position:
               
250-508
               

               
Cow position:
               
chr12:17774869-17774612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
250-567
               

               
Cow position:
               
chr12:15163214-15162914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
217, 87
               

               
Conread position:
               
250-568
               

               
Cow position:
               
chr12:29770504-29770810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
145, 78
               

               
Conread position:
               
250-604
               

               
Cow position:
               
chr12:1223270-1223616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
129, 49
               

               
Conread position:
               
250-604
               

               
Cow position:
               
chr12:39465654-39465305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 14
               

               
Conread position:
               
250-607
               

               
Cow position:
               
chr12:24559433-24559077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 121
               

               
Conread position:
               
250-624
               

               
Cow position:
               
chr12:41474164-41473802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
137, 168
               

               
Conread position:
               
250-626
               

               
Cow position:
               
chr12:19691159-19691530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
250-630
               

               
Cow position:
               
chr12:1773586-1773962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 265
               

               
Conread position:
               
251-389
               

               
Cow position:
               
chr12:45167946-45168083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
251-412
               

               
Cow position:
               
chr12:4135151-4134989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
251-497
               

               
Cow position:
               
chr12:44920104-44919860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
139, 39
               

               
Conread position:
               
251-568
               

               
Cow position:
               
chr12:23798173-23797866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
71, 80
               

               
Conread position:
               
251-568
               

               
Cow position:
               
chr12:24211481-24211179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
149, 87
               

               
Conread position:
               
251-583
               

               
Cow position:
               
chr12:28213583-28213266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 51
               

               
Conread position:
               
251-624
               

               
Cow position:
               
chr12:29483812-29484184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
122, 250
               

               
Conread position:
               
251-626
               

               
Cow position:
               
chr12:5906130-5905762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 221
               

               
Conread position:
               
251-631
               

               
Cow position:
               
chr12:30753793-30753427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 74
               

               
Conread position:
               
251-658
               

               
Cow position:
               
chr12:45820292-45820682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 202
               

               
Conread position:
               
252-638
               

               
Cow position:
               
chr12:30170747-30170360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
255-493
               

               
Cow position:
               
chr12:25340599-25340343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
255-524
               

               
Cow position:
               
chr12:23855902-23855632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
143, 22
               

               
Conread position:
               
256-477
               

               
Cow position:
               
chr12:42174485-42174267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
256-624
               

               
Cow position:
               
chr12:5801112-5800745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
256-628
               

               
Cow position:
               
chr12:2711567-2711195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
67, 86
               

               
Conread position:
               
256-630
               

               
Cow position:
               
chr12:3756978-3757336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
199, 53
               

               
Conread position:
               
257-471
               

               
Cow position:
               
chr12:34165650-34165440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
257-478
               

               
Cow position:
               
chr12:38184662-38184443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr12:19502361-19502696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
219, 133
               

               
Conread position:
               
259-493
               

               
Cow position:
               
chr12:12304446-12304221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
140, 70
               

               
Conread position:
               
260-556
               

               
Cow position:
               
chr12:25452383-25452670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
138, 8
               

               
Conread position:
               
264-493
               

               
Cow position:
               
chr12:25110380-25110606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
133, 74
               

               
Conread position:
               
264-626
               

               
Cow position:
               
chr12:29995403-29995757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 80
               

               
Conread position:
               
264-626
               

               
Cow position:
               
chr12:44905688-44905342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
202, 59
               

               
Conread position:
               
264-628
               

               
Cow position:
               
chr12:26222929-26223281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 74
               

               
Conread position:
               
264-629
               

               
Cow position:
               
chr12:22882117-22881754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
123, 221
               

               
Conread position:
               
264-630
               

               
Cow position:
               
chr12:8868821-8869181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 65
               

               
Conread position:
               
265-559
               

               
Cow position:
               
chr12:28749001-28748706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
131, 56
               

               
Conread position:
               
268-642
               

               
Cow position:
               
chr12:40110428-40110073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
213, 63
               

               
Conread position:
               
269-489
               

               
Cow position:
               
chr12:9894838-9894616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
200, 125
               

               
Conread position:
               
272-508
               

               
Cow position:
               
chr12:10491325-10491086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
273-477
               

               
Cow position:
               
chr12:6102776-6102980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
133, 87
               

               
Conread position:
               
273-477
               

               
Cow position:
               
chr12:15038924-15039129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
273-498
               

               
Cow position:
               
chr12:20636100-20636334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
273-626
               

               
Cow position:
               
chr12:3076575-3076918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
199, 117
               

               
Conread position:
               
273-630
               

               
Cow position:
               
chr12:45814210-45814563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
157, 112
               

               
Conread position:
               
276-560
               

               
Cow position:
               
chr12:3906521-3906239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
124, 7
               

               
Conread position:
               
280-560
               

               
Cow position:
               
chr12:18963883-18964158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
197, 208
               

               
Conread position:
               
280-568
               

               
Cow position:
               
chr12:5658032-5658313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
259, 106
               

               
Conread position:
               
280-630
               

               
Cow position:
               
chr12:19664487-19664814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
191, 92
               

               
Conread position:
               
280-643
               

               
Cow position:
               
chr12:17717110-17716775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
281-630
               

               
Cow position:
               
chr12:2813271-2812928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
110, 153
               

               
Conread position:
               
281-630
               

               
Cow position:
               
chr12:19508515-19508871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
97, 136
               

               
Conread position:
               
281-636
               

               
Cow position:
               
chr12:10462034-10461701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
191, 109
               

               
Conread position:
               
282-604
               

               
Cow position:
               
chr12:37770913-37770602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
90, 46
               

               
Conread position:
               
283-474
               

               
Cow position:
               
chr12:21911851-21911652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
283-636
               

               
Cow position:
               
chr12:34673298-34673634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
89, 117
               

               
Conread position:
               
285-630
               

               
Cow position:
               
chr12:19869502-19869172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
191, 18
               

               
Conread position:
               
286-493
               

               
Cow position:
               
chr12:31948157-31947948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
22, 110
               

               
Conread position:
               
286-568
               

               
Cow position:
               
chr12:35378240-35377962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
290-631
               

               
Cow position:
               
chr12:3056167-3055836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
293-490
               

               
Cow position:
               
chr12:730904-731104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
296-452
               

               
Cow position:
               
chr12:37137497-37137651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
298-627
               

               
Cow position:
               
chr12:941668-941337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
298-630
               

               
Cow position:
               
chr12:45555398-45555717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
299-508
               

               
Cow position:
               
chr12:40028728-40028946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
299-624
               

               
Cow position:
               
chr12:41091559-41091236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 130
               

               
Conread position:
               
299-636
               

               
Cow position:
               
chr12:13007747-13008080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
100, 110
               

               
Conread position:
               
299-636
               

               
Cow position:
               
chr12:20326800-20326466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 101
               

               
Conread position:
               
300-606
               

               
Cow position:
               
chr12:18040583-18040866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
302-493
               

               
Cow position:
               
chr12:7557896-7558076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
175, 50
               

               
Conread position:
               
311-624
               

               
Cow position:
               
chr12:6164008-6164322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
313-567
               

               
Cow position:
               
chr12:13996009-13996271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 88
               

               
Conread position:
               
314-623
               

               
Cow position:
               
chr12:28010898-28011191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
167, 12
               

               
Conread position:
               
314-630
               

               
Cow position:
               
chr12:3568952-3568646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
314-633
               

               
Cow position:
               
chr12:3510572-3510263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
314-637
               

               
Cow position:
               
chr12:34385500-34385820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
316-630
               

               
Cow position:
               
chr12:1246308-1245995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
321-618
               

               
Cow position:
               
chr12:12178927-12178634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
92, 56
               

               
Conread position:
               
321-639
               

               
Cow position:
               
chr12:44013836-44014148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 73
               

               
Conread position:
               
325-564
               

               
Cow position:
               
chr12:38454909-38454685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
325-568
               

               
Cow position:
               
chr12:12030828-12031072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 178
               

               
Conread position:
               
327-626
               

               
Cow position:
               
chr12:22932562-22932859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
150, 175
               

               
Conread position:
               
327-636
               

               
Cow position:
               
chr12:31260181-31260488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
150, 162
               

               
Conread position:
               
329-572
               

               
Cow position:
               
chr12:43582771-43582537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
331-644
               

               
Cow position:
               
chr12:12938926-12939243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
331-646
               

               
Cow position:
               
chr12:27562834-27563154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
332-595
               

               
Cow position:
               
chr12:24107552-24107802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 139
               

               
Conread position:
               
332-626
               

               
Cow position:
               
chr12:3579279-3578987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
332-629
               

               
Cow position:
               
chr12:1284469-1284756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
148, 62
               

               
Conread position:
               
333-630
               

               
Cow position:
               
chr12:21203219-21202923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
334-504
               

               
Cow position:
               
chr12:4122553-4122723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
334-634
               

               
Cow position:
               
chr12:11583381-11583099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
335-620
               

               
Cow position:
               
chr12:16851016-16851298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 169
               

               
Conread position:
               
335-624
               

               
Cow position:
               
chr12:5899515-5899234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
337-556
               

               
Cow position:
               
chr12:37088917-37088701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
338-542
               

               
Cow position:
               
chr12:2670253-2670049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
339-544
               

               
Cow position:
               
chr12:38484402-38484616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 177
               

               
Conread position:
               
339-630
               

               
Cow position:
               
chr12:26782870-26782582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
339-644
               

               
Cow position:
               
chr12:25619385-25619690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
60, 168
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr12:30476467-30476240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
62, 158
               

               
Conread position:
               
340-607
               

               
Cow position:
               
chr12:44846371-44846117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
340-630
               

               
Cow position:
               
chr12:2241904-2242184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 91
               

               
Conread position:
               
340-642
               

               
Cow position:
               
chr12:24032990-24032697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
94, 157
               

               
Conread position:
               
344-544
               

               
Cow position:
               
chr12:37536509-37536705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
345-470
               

               
Cow position:
               
chr12:30517852-30517731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
345-626
               

               
Cow position:
               
chr12:3039491-3039219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 141
               

               
Conread position:
               
346-564
               

               
Cow position:
               
chr12:38511857-38512075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 157
               

               
Conread position:
               
347-488
               

               
Cow position:
               
chr12:20354954-20354804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
347-560
               

               
Cow position:
               
chr12:25820452-25820662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 96
               

               
Conread position:
               
347-588
               

               
Cow position:
               
chr12:4182713-4182953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
130, 150
               

               
Conread position:
               
347-604
               

               
Cow position:
               
chr12:22047448-22047196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
125, 43
               

               
Conread position:
               
347-624
               

               
Cow position:
               
chr12:24440793-24440519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
133, 49
               

               
Conread position:
               
347-629
               

               
Cow position:
               
chr12:28650935-28650659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
347-644
               

               
Cow position:
               
chr12:25456097-25455801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
348-607
               

               
Cow position:
               
chr12:40008888-40008635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 46
               

               
Conread position:
               
350-619
               

               
Cow position:
               
chr12:32400177-32399908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
350-620
               

               
Cow position:
               
chr12:18021567-18021284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
350-630
               

               
Cow position:
               
chr12:1848560-1848837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
125, 146
               

               
Conread position:
               
350-637
               

               
Cow position:
               
chr12:3071084-3070804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
350-650
               

               
Cow position:
               
chr12:19039635-19039928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
92, 160
               

               
Conread position:
               
352-599
               

               
Cow position:
               
chr12:17702253-17702501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 148
               

               
Conread position:
               
353-630
               

               
Cow position:
               
chr12:32391820-32391546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 155
               

               
Conread position:
               
355-630
               

               
Cow position:
               
chr12:46143792-46143522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
360-490
               

               
Cow position:
               
chr12:7191297-7191429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
360-554
               

               
Cow position:
               
chr12:44559553-44559363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
112, 141
               

               
Conread position:
               
361-642
               

               
Cow position:
               
chr12:44767040-44766772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
362-568
               

               
Cow position:
               
chr12:6226689-6226884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
114, 28
               

               
Conread position:
               
365-594
               

               
Cow position:
               
chr12:3994918-3994686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 137
               

               
Conread position:
               
383-626
               

               
Cow position:
               
chr12:18076475-18076239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
89, 120
               

               
Conread position:
               
384-633
               

               
Cow position:
               
chr12:24755094-24755326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 46
               

               
Conread position:
               
385-630
               

               
Cow position:
               
chr12:35807618-35807377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
389-624
               

               
Cow position:
               
chr12:12017813-12017583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
391-593
               

               
Cow position:
               
chr12:29161882-29162073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
393-626
               

               
Cow position:
               
chr12:3212261-3212029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 119
               

               
Conread position:
               
393-629
               

               
Cow position:
               
chr12:9465532-9465758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
394-607
               

               
Cow position:
               
chr12:12699835-12700051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
82, 149
               

               
Conread position:
               
396-626
               

               
Cow position:
               
chr12:40270164-40270381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 102
               

               
Conread position:
               
396-628
               

               
Cow position:
               
chr12:17008131-17007900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 10
               

               
Conread position:
               
396-631
               

               
Cow position:
               
chr12:41979370-41979599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
48, 106
               

               
Conread position:
               
398-489
               

               
Cow position:
               
chr12:22260897-22260990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
398-629
               

               
Cow position:
               
chr12:40158312-40158537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 99
               

               
Conread position:
               
399-622
               

               
Cow position:
               
chr12:26868869-26869087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
72, 98
               

               
Conread position:
               
402-640
               

               
Cow position:
               
chr12:31841364-31841130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
72, 95
               

               
Conread position:
               
405-630
               

               
Cow position:
               
chr12:35218485-35218703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
71, 93
               

               
Conread position:
               
407-621
               

               
Cow position:
               
chr12:4134588-4134375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 90
               

               
Conread position:
               
408-574
               

               
Cow position:
               
chr12:24180812-24180654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
131, 7
               

               
Conread position:
               
413-633
               

               
Cow position:
               
chr12:3880341-3880559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
415-644
               

               
Cow position:
               
chr12:4518283-4518510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
416-626
               

               
Cow position:
               
chr12:4008369-4008578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 69
               

               
Conread position:
               
420-630
               

               
Cow position:
               
chr12:34148445-34148650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
420-637
               

               
Cow position:
               
chr12:44273937-44274153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 117
               

               
Conread position:
               
430-634
               

               
Cow position:
               
chr12:31925543-31925347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
433-625
               

               
Cow position:
               
chr12:25805219-25805404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 67
               
Show alignments to all cow chromosomes.