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Cow genome map

           
Conread name:
           
Ova1-OVRM10096F06
        

               
Conread position:
               
121-480
               

               
Cow position:
               
chr16:12274314-12273951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
126-630
               

               
Cow position:
               
chr16:38663470-38663972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 44
               

               
Conread position:
               
128-493
               

               
Cow position:
               
chr16:12320457-12320090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
128-646
               

               
Cow position:
               
chr16:48385182-48385678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 41
               

               
Conread position:
               
129-607
               

               
Cow position:
               
chr16:7151936-7152412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
130-419
               

               
Cow position:
               
chr16:51795366-51795656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
130-596
               

               
Cow position:
               
chr16:49336450-49336000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 27
               

               
Conread position:
               
130-634
               

               
Cow position:
               
chr16:7429621-7429113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
16, 112
               

               
Conread position:
               
130-658
               

               
Cow position:
               
chr16:7076150-7075631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
135-493
               

               
Cow position:
               
chr16:54225288-54225638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
131, 35
               

               
Conread position:
               
137-607
               

               
Cow position:
               
chr16:49229548-49230006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 23
               

               
Conread position:
               
150-630
               

               
Cow position:
               
chr16:29655529-29655064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 82
               

               
Conread position:
               
151-618
               

               
Cow position:
               
chr16:20476749-20476287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
151-624
               

               
Cow position:
               
chr16:47245801-47245333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 163
               

               
Conread position:
               
151-631
               

               
Cow position:
               
chr16:53508771-53509250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
156-427
               

               
Cow position:
               
chr16:8205873-8206130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
157-361
               

               
Cow position:
               
chr16:9513499-9513297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
157-478
               

               
Cow position:
               
chr16:47852391-47852708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 13
               

               
Conread position:
               
157-630
               

               
Cow position:
               
chr16:29766529-29766083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
158-354
               

               
Cow position:
               
chr16:44688190-44688381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
7, 74
               

               
Conread position:
               
158-361
               

               
Cow position:
               
chr16:17474964-17474768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
158-644
               

               
Cow position:
               
chr16:41752374-41752848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 131
               

               
Conread position:
               
159-370
               

               
Cow position:
               
chr16:12220892-12220675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
159-444
               

               
Cow position:
               
chr16:56670705-56671002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
159-448
               

               
Cow position:
               
chr16:33135133-33134856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
226, 56
               

               
Conread position:
               
159-487
               

               
Cow position:
               
chr16:11083201-11082883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 11
               

               
Conread position:
               
159-562
               

               
Cow position:
               
chr16:24855738-24855347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
159-567
               

               
Cow position:
               
chr16:11957376-11957782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
159-571
               

               
Cow position:
               
chr16:8065681-8066083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
159-588
               

               
Cow position:
               
chr16:8322790-8323205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 25
               

               
Conread position:
               
159-597
               

               
Cow position:
               
chr16:50289363-50288929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
159-623
               

               
Cow position:
               
chr16:39473952-39474392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
233, 34
               

               
Conread position:
               
159-626
               

               
Cow position:
               
chr16:32587413-32586942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
159-630
               

               
Cow position:
               
chr16:13689867-13689402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 10
               

               
Conread position:
               
159-630
               

               
Cow position:
               
chr16:53267910-53267468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
237, 59
               

               
Conread position:
               
159-631
               

               
Cow position:
               
chr16:54579371-54578905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 177
               

               
Conread position:
               
159-638
               

               
Cow position:
               
chr16:42092174-42092645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
159-644
               

               
Cow position:
               
chr16:14242574-14242100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 152
               

               
Conread position:
               
160-374
               

               
Cow position:
               
chr16:9836576-9836783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
158, 68
               

               
Conread position:
               
160-403
               

               
Cow position:
               
chr16:49860440-49860193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 109
               

               
Conread position:
               
160-602
               

               
Cow position:
               
chr16:54664591-54665036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
160-604
               

               
Cow position:
               
chr16:17143143-17142698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 236
               

               
Conread position:
               
160-607
               

               
Cow position:
               
chr16:40333130-40333563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 71
               

               
Conread position:
               
160-622
               

               
Cow position:
               
chr16:9933365-9932903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
160-631
               

               
Cow position:
               
chr16:32969877-32970330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
222, 114
               

               
Conread position:
               
160-659
               

               
Cow position:
               
chr16:46552997-46552532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
161-362
               

               
Cow position:
               
chr16:11653334-11653140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
161-385
               

               
Cow position:
               
chr16:9578289-9578512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
161-391
               

               
Cow position:
               
chr16:7496453-7496230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-402
               

               
Cow position:
               
chr16:44138287-44138530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
161-429
               

               
Cow position:
               
chr16:13712738-13712998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
263, 32
               

               
Conread position:
               
161-431
               

               
Cow position:
               
chr16:42977678-42977394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
70, 112
               

               
Conread position:
               
161-432
               

               
Cow position:
               
chr16:42432913-42433185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
238, 71
               

               
Conread position:
               
161-435
               

               
Cow position:
               
chr16:32301797-32302077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 242
               

               
Conread position:
               
161-449
               

               
Cow position:
               
chr16:36286483-36286768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
238, 69
               

               
Conread position:
               
161-450
               

               
Cow position:
               
chr16:28444283-28444574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 266
               

               
Conread position:
               
161-469
               

               
Cow position:
               
chr16:40514289-40514587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
161-485
               

               
Cow position:
               
chr16:50933690-50933994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
155, 38
               

               
Conread position:
               
161-493
               

               
Cow position:
               
chr16:44210356-44210697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
161-493
               

               
Cow position:
               
chr16:56565792-56565464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
161-565
               

               
Cow position:
               
chr16:41530104-41530487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 36
               

               
Conread position:
               
161-566
               

               
Cow position:
               
chr16:424605-425012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
71, 125
               

               
Conread position:
               
161-568
               

               
Cow position:
               
chr16:28395887-28396295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
217, 35
               

               
Conread position:
               
161-590
               

               
Cow position:
               
chr16:42444364-42443933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 103
               

               
Conread position:
               
161-597
               

               
Cow position:
               
chr16:18757631-18758072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
161-598
               

               
Cow position:
               
chr16:32781571-32781133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
161-607
               

               
Cow position:
               
chr16:45047451-45047861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 69
               

               
Conread position:
               
161-611
               

               
Cow position:
               
chr16:29557420-29557873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 175
               

               
Conread position:
               
161-624
               

               
Cow position:
               
chr16:39165437-39164991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 70
               

               
Conread position:
               
161-624
               

               
Cow position:
               
chr16:43276234-43275767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 60
               

               
Conread position:
               
161-629
               

               
Cow position:
               
chr16:50688711-50688266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 42
               

               
Conread position:
               
161-629
               

               
Cow position:
               
chr16:51501132-51500672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 95
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr16:7542490-7542030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
177, 70
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr16:54288068-54287616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
161-631
               

               
Cow position:
               
chr16:18557078-18557528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
159, 61
               

               
Conread position:
               
161-634
               

               
Cow position:
               
chr16:5415541-5416021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
39, 181
               

               
Conread position:
               
161-634
               

               
Cow position:
               
chr16:8025665-8026110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
378, 96
               

               
Conread position:
               
161-640
               

               
Cow position:
               
chr16:29096121-29095683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
161-644
               

               
Cow position:
               
chr16:18692963-18693405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 70
               

               
Conread position:
               
161-644
               

               
Cow position:
               
chr16:23681565-23681097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 160
               

               
Conread position:
               
161-651
               

               
Cow position:
               
chr16:18206164-18205689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
161-653
               

               
Cow position:
               
chr16:11008532-11008061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 54
               

               
Conread position:
               
162-358
               

               
Cow position:
               
chr16:38355229-38355421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
162-366
               

               
Cow position:
               
chr16:45193605-45193811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
162-382
               

               
Cow position:
               
chr16:9596571-9596352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
162-472
               

               
Cow position:
               
chr16:45122245-45121929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 237
               

               
Conread position:
               
162-568
               

               
Cow position:
               
chr16:14685188-14685588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 238
               

               
Conread position:
               
162-568
               

               
Cow position:
               
chr16:16552768-16552363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
162-593
               

               
Cow position:
               
chr16:22773176-22772744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
210, 69
               

               
Conread position:
               
162-607
               

               
Cow position:
               
chr16:25839814-25839380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 82
               

               
Conread position:
               
162-623
               

               
Cow position:
               
chr16:26372760-26373205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 54
               

               
Conread position:
               
162-625
               

               
Cow position:
               
chr16:26649432-26649889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 29
               

               
Conread position:
               
162-626
               

               
Cow position:
               
chr16:23729726-23730193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
162-626
               

               
Cow position:
               
chr16:56232015-56231566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
210, 68
               

               
Conread position:
               
162-630
               

               
Cow position:
               
chr16:49125987-49126444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 71
               

               
Conread position:
               
162-644
               

               
Cow position:
               
chr16:22841844-22842328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 129
               

               
Conread position:
               
163-371
               

               
Cow position:
               
chr16:18572853-18573061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 124
               

               
Conread position:
               
163-387
               

               
Cow position:
               
chr16:11359349-11359128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
163-389
               

               
Cow position:
               
chr16:17283644-17283421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
163-416
               

               
Cow position:
               
chr16:7394737-7394989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
229, 30
               

               
Conread position:
               
163-441
               

               
Cow position:
               
chr16:8018159-8017889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
181, 67
               

               
Conread position:
               
163-445
               

               
Cow position:
               
chr16:44429079-44428797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
229, 30
               

               
Conread position:
               
163-448
               

               
Cow position:
               
chr16:50931331-50931602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
126, 68
               

               
Conread position:
               
163-467
               

               
Cow position:
               
chr16:30186846-30186539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
163-493
               

               
Cow position:
               
chr16:36120794-36121112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
306, 66
               

               
Conread position:
               
163-493
               

               
Cow position:
               
chr16:42733819-42734145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
209, 30
               

               
Conread position:
               
163-564
               

               
Cow position:
               
chr16:45457155-45456761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
191, 20
               

               
Conread position:
               
163-590
               

               
Cow position:
               
chr16:10032841-10032407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
163-602
               

               
Cow position:
               
chr16:10148469-10148048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
234, 68
               

               
Conread position:
               
163-604
               

               
Cow position:
               
chr16:41590972-41590544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
227, 10
               

               
Conread position:
               
163-620
               

               
Cow position:
               
chr16:5725664-5725224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
163-620
               

               
Cow position:
               
chr16:8522189-8522638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
163-626
               

               
Cow position:
               
chr16:2223192-2223664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 98
               

               
Conread position:
               
163-626
               

               
Cow position:
               
chr16:15370885-15370423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 93
               

               
Conread position:
               
163-629
               

               
Cow position:
               
chr16:23822827-23823279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
163-630
               

               
Cow position:
               
chr16:8448458-8448923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
225, 64
               

               
Conread position:
               
163-630
               

               
Cow position:
               
chr16:9497058-9497534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
36, 240
               

               
Conread position:
               
163-631
               

               
Cow position:
               
chr16:51598411-51598864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
55, 66
               

               
Conread position:
               
163-634
               

               
Cow position:
               
chr16:3246001-3246457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 271
               

               
Conread position:
               
163-635
               

               
Cow position:
               
chr16:53813447-53813925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 208
               

               
Conread position:
               
163-637
               

               
Cow position:
               
chr16:21451052-21450580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 324
               

               
Conread position:
               
164-535
               

               
Cow position:
               
chr16:7418574-7418215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
291, 46
               

               
Conread position:
               
164-602
               

               
Cow position:
               
chr16:26676486-26676923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
164-620
               

               
Cow position:
               
chr16:30908748-30909182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
287, 92
               

               
Conread position:
               
164-631
               

               
Cow position:
               
chr16:16264917-16265361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 50
               

               
Conread position:
               
166-349
               

               
Cow position:
               
chr16:51143998-51143814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr16:56580105-56579918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
166-385
               

               
Cow position:
               
chr16:9959028-9958808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 95
               

               
Conread position:
               
166-452
               

               
Cow position:
               
chr16:26030677-26030973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
66, 288
               

               
Conread position:
               
166-612
               

               
Cow position:
               
chr16:20205663-20205209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
65, 95
               

               
Conread position:
               
166-626
               

               
Cow position:
               
chr16:38708637-38709083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
80, 187
               

               
Conread position:
               
166-638
               

               
Cow position:
               
chr16:16402120-16402596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 173
               

               
Conread position:
               
168-397
               

               
Cow position:
               
chr16:15905046-15905284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
168-490
               

               
Cow position:
               
chr16:8738264-8737936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
64, 244
               

               
Conread position:
               
168-636
               

               
Cow position:
               
chr16:4910324-4910798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 312
               

               
Conread position:
               
169-381
               

               
Cow position:
               
chr16:50286709-50286496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
169-421
               

               
Cow position:
               
chr16:12687921-12688167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
104, 75
               

               
Conread position:
               
169-441
               

               
Cow position:
               
chr16:9830644-9830368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
169-478
               

               
Cow position:
               
chr16:50453944-50453647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
62, 24
               

               
Conread position:
               
169-479
               

               
Cow position:
               
chr16:13483380-13483690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 49
               

               
Conread position:
               
169-479
               

               
Cow position:
               
chr16:22984946-22984641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
169-479
               

               
Cow position:
               
chr16:51697271-51696966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
185, 62
               

               
Conread position:
               
169-479
               

               
Cow position:
               
chr16:54226418-54226715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
169-479
               

               
Cow position:
               
chr16:56796458-56796782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 238
               

               
Conread position:
               
169-483
               

               
Cow position:
               
chr16:12324650-12324339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
220, 0
               

               
Conread position:
               
169-490
               

               
Cow position:
               
chr16:23955635-23955955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr16:40446464-40446120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 165
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr16:46433128-46433459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
33, 321
               

               
Conread position:
               
169-497
               

               
Cow position:
               
chr16:9905292-9904957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
74, 244
               

               
Conread position:
               
169-535
               

               
Cow position:
               
chr16:34153373-34153743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
169-544
               

               
Cow position:
               
chr16:7441904-7442281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
63, 121
               

               
Conread position:
               
169-561
               

               
Cow position:
               
chr16:22808378-22808743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 63
               

               
Conread position:
               
169-563
               

               
Cow position:
               
chr16:6344262-6344633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 62
               

               
Conread position:
               
169-564
               

               
Cow position:
               
chr16:45554630-45554243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
181, 61
               

               
Conread position:
               
169-568
               

               
Cow position:
               
chr16:31117423-31117819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
213, 10
               

               
Conread position:
               
169-568
               

               
Cow position:
               
chr16:52274939-52275329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 62
               

               
Conread position:
               
169-588
               

               
Cow position:
               
chr16:52636199-52636601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
169-620
               

               
Cow position:
               
chr16:38905028-38905477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 233
               

               
Conread position:
               
169-624
               

               
Cow position:
               
chr16:238462-238006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 154
               

               
Conread position:
               
169-625
               

               
Cow position:
               
chr16:4856903-4857347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
63, 165
               

               
Conread position:
               
169-625
               

               
Cow position:
               
chr16:48095573-48096019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 62
               

               
Conread position:
               
169-626
               

               
Cow position:
               
chr16:7505273-7504843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
221, 9
               

               
Conread position:
               
169-626
               

               
Cow position:
               
chr16:17746040-17745577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
169-629
               

               
Cow position:
               
chr16:7136150-7136612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
201, 334
               

               
Conread position:
               
169-629
               

               
Cow position:
               
chr16:49125325-49125780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
169-629
               

               
Cow position:
               
chr16:50282239-50282691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr16:820447-819990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 62
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr16:1548685-1549135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 86
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr16:4971825-4972286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 61
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr16:10039648-10040099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 142
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr16:15824245-15824699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
33, 124
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr16:19670162-19670592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 62
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr16:56082166-56082619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr16:29159309-29158870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 33
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr16:45139859-45139408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
231, 15
               

               
Conread position:
               
169-633
               

               
Cow position:
               
chr16:11774854-11775315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
169-633
               

               
Cow position:
               
chr16:33704998-33704536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 68
               

               
Conread position:
               
169-636
               

               
Cow position:
               
chr16:13990162-13989719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
275, 62
               

               
Conread position:
               
169-636
               

               
Cow position:
               
chr16:19644082-19643628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
150, 51
               

               
Conread position:
               
169-636
               

               
Cow position:
               
chr16:42078652-42079106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 106
               

               
Conread position:
               
169-638
               

               
Cow position:
               
chr16:14106840-14106377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 135
               

               
Conread position:
               
169-646
               

               
Cow position:
               
chr16:45813502-45813971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
70, 162
               

               
Conread position:
               
169-647
               

               
Cow position:
               
chr16:13306675-13307137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 203
               

               
Conread position:
               
169-655
               

               
Cow position:
               
chr16:44743934-44744415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
80, 329
               

               
Conread position:
               
169-659
               

               
Cow position:
               
chr16:7665836-7665343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 335
               

               
Conread position:
               
170-448
               

               
Cow position:
               
chr16:56665761-56665488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
220, 29
               

               
Conread position:
               
170-488
               

               
Cow position:
               
chr16:44584248-44584564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
118, 40
               

               
Conread position:
               
170-493
               

               
Cow position:
               
chr16:7583593-7583265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
170-493
               

               
Cow position:
               
chr16:33595753-33596067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
302, 107
               

               
Conread position:
               
170-493
               

               
Cow position:
               
chr16:49511760-49511451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
224, 47
               

               
Conread position:
               
170-565
               

               
Cow position:
               
chr16:591609-592014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
79, 257
               

               
Conread position:
               
171-434
               

               
Cow position:
               
chr16:11134791-11135054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
219, 86
               

               
Conread position:
               
171-605
               

               
Cow position:
               
chr16:29038111-29037680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
60, 106
               

               
Conread position:
               
171-630
               

               
Cow position:
               
chr16:43308371-43308822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
171-646
               

               
Cow position:
               
chr16:23564332-23563859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 194
               

               
Conread position:
               
173-626
               

               
Cow position:
               
chr16:23472934-23472493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 58
               

               
Conread position:
               
173-630
               

               
Cow position:
               
chr16:51043838-51043372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
215, 47
               

               
Conread position:
               
173-634
               

               
Cow position:
               
chr16:14754136-14754589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 56
               

               
Conread position:
               
173-635
               

               
Cow position:
               
chr16:48398065-48398511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
199, 58
               

               
Conread position:
               
174-494
               

               
Cow position:
               
chr16:48146463-48146790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 85
               

               
Conread position:
               
175-437
               

               
Cow position:
               
chr16:42539392-42539664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
175-619
               

               
Cow position:
               
chr16:14568301-14568734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 81
               

               
Conread position:
               
176-490
               

               
Cow position:
               
chr16:27723400-27723084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 55
               

               
Conread position:
               
176-545
               

               
Cow position:
               
chr16:38243471-38243840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
58, 176
               

               
Conread position:
               
176-630
               

               
Cow position:
               
chr16:5654690-5654251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
55, 177
               

               
Conread position:
               
176-630
               

               
Cow position:
               
chr16:53428443-53427996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 88
               

               
Conread position:
               
177-458
               

               
Cow position:
               
chr16:47835107-47834834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
169, 100
               

               
Conread position:
               
177-535
               

               
Cow position:
               
chr16:31348574-31348936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
20, 147
               

               
Conread position:
               
177-607
               

               
Cow position:
               
chr16:8193644-8193211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
177-626
               

               
Cow position:
               
chr16:8841085-8840635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
29, 214
               

               
Conread position:
               
177-626
               

               
Cow position:
               
chr16:33646203-33645757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 259
               

               
Conread position:
               
177-630
               

               
Cow position:
               
chr16:7702703-7702270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 27
               

               
Conread position:
               
178-644
               

               
Cow position:
               
chr16:48145219-48145674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
163, 76
               

               
Conread position:
               
179-574
               

               
Cow position:
               
chr16:42629277-42629681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 194
               

               
Conread position:
               
181-630
               

               
Cow position:
               
chr16:25170577-25170130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
62, 226
               

               
Conread position:
               
182-604
               

               
Cow position:
               
chr16:4192248-4192655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 158
               

               
Conread position:
               
183-637
               

               
Cow position:
               
chr16:3614919-3614480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 31
               

               
Conread position:
               
184-477
               

               
Cow position:
               
chr16:2417405-2417704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
184-556
               

               
Cow position:
               
chr16:8231183-8231546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
48, 105
               

               
Conread position:
               
184-626
               

               
Cow position:
               
chr16:42241942-42242375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 47
               

               
Conread position:
               
185-488
               

               
Cow position:
               
chr16:41578405-41578099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
193-568
               

               
Cow position:
               
chr16:17981977-17982343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
206, 5
               

               
Conread position:
               
193-655
               

               
Cow position:
               
chr16:7619002-7619481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
71, 319
               

               
Conread position:
               
195-630
               

               
Cow position:
               
chr16:51112711-51113137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 163
               

               
Conread position:
               
196-435
               

               
Cow position:
               
chr16:9161245-9161006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
191, 34
               

               
Conread position:
               
200-605
               

               
Cow position:
               
chr16:37452451-37452850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
206-493
               

               
Cow position:
               
chr16:22380194-22380487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 140
               

               
Conread position:
               
207-636
               

               
Cow position:
               
chr16:48086715-48087137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
183, 48
               

               
Conread position:
               
212-493
               

               
Cow position:
               
chr16:47964669-47964947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
265, 18
               

               
Conread position:
               
212-640
               

               
Cow position:
               
chr16:48006341-48006761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
213-568
               

               
Cow position:
               
chr16:42752997-42752661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
171, 51
               

               
Conread position:
               
214-640
               

               
Cow position:
               
chr16:20633727-20634141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 41
               

               
Conread position:
               
217-636
               

               
Cow position:
               
chr16:52854876-52855283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
225-629
               

               
Cow position:
               
chr16:5845806-5845411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
232-607
               

               
Cow position:
               
chr16:36203484-36203853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
232-626
               

               
Cow position:
               
chr16:30715636-30715235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
159, 208
               

               
Conread position:
               
232-644
               

               
Cow position:
               
chr16:50014652-50014255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
244, 67
               

               
Conread position:
               
235-493
               

               
Cow position:
               
chr16:8076373-8076640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
235-644
               

               
Cow position:
               
chr16:4979931-4979541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
55, 65
               

               
Conread position:
               
237-630
               

               
Cow position:
               
chr16:4399862-4399460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 162
               

               
Conread position:
               
238-654
               

               
Cow position:
               
chr16:53086216-53086610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 17
               

               
Conread position:
               
239-476
               

               
Cow position:
               
chr16:33869638-33869874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 148
               

               
Conread position:
               
240-646
               

               
Cow position:
               
chr16:11791134-11790736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
152, 91
               

               
Conread position:
               
241-630
               

               
Cow position:
               
chr16:4626268-4626655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
153, 193
               

               
Conread position:
               
242-508
               

               
Cow position:
               
chr16:41689815-41689548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 144
               

               
Conread position:
               
243-630
               

               
Cow position:
               
chr16:56831622-56832001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
201, 13
               

               
Conread position:
               
244-493
               

               
Cow position:
               
chr16:35297197-35296941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
86, 207
               

               
Conread position:
               
244-568
               

               
Cow position:
               
chr16:8068704-8069017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
146, 93
               

               
Conread position:
               
244-624
               

               
Cow position:
               
chr16:19408408-19408768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
38, 30
               

               
Conread position:
               
245-528
               

               
Cow position:
               
chr16:17289066-17288779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
145, 259
               

               
Conread position:
               
245-619
               

               
Cow position:
               
chr16:13969248-13969629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
22, 256
               

               
Conread position:
               
245-630
               

               
Cow position:
               
chr16:18353839-18354212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 93
               

               
Conread position:
               
245-630
               

               
Cow position:
               
chr16:32132624-32132268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
236, 11
               

               
Conread position:
               
245-646
               

               
Cow position:
               
chr16:13600963-13601352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
246-493
               

               
Cow position:
               
chr16:12634002-12633754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
173, 145
               

               
Conread position:
               
246-493
               

               
Cow position:
               
chr16:17945637-17945390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
149, 12
               

               
Conread position:
               
246-505
               

               
Cow position:
               
chr16:14974426-14974677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 84
               

               
Conread position:
               
246-626
               

               
Cow position:
               
chr16:39616840-39616487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
213, 78
               

               
Conread position:
               
246-630
               

               
Cow position:
               
chr16:19003415-19003781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
231, 135
               

               
Conread position:
               
247-411
               

               
Cow position:
               
chr16:15953702-15953871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
247-433
               

               
Cow position:
               
chr16:17135841-17135657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
154, 83
               

               
Conread position:
               
247-436
               

               
Cow position:
               
chr16:8273721-8273911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
247-449
               

               
Cow position:
               
chr16:30358946-30359147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
158, 144
               

               
Conread position:
               
247-456
               

               
Cow position:
               
chr16:34220303-34220090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
247-478
               

               
Cow position:
               
chr16:29677517-29677745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
247-479
               

               
Cow position:
               
chr16:34753843-34754077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
247-480
               

               
Cow position:
               
chr16:13578744-13578979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
247-483
               

               
Cow position:
               
chr16:5907467-5907229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
247-487
               

               
Cow position:
               
chr16:43800802-43801045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
147, 37
               

               
Conread position:
               
247-493
               

               
Cow position:
               
chr16:10773238-10773001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
229, 83
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr16:17282775-17282529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
137, 84
               

               
Conread position:
               
247-497
               

               
Cow position:
               
chr16:51247051-51246812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
151, 68
               

               
Conread position:
               
247-535
               

               
Cow position:
               
chr16:20069949-20069659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
150, 245
               

               
Conread position:
               
247-590
               

               
Cow position:
               
chr16:54679781-54679446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
147, 14
               

               
Conread position:
               
247-607
               

               
Cow position:
               
chr16:3634233-3633877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
124, 199
               

               
Conread position:
               
247-609
               

               
Cow position:
               
chr16:6379008-6379350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
230, 81
               

               
Conread position:
               
247-620
               

               
Cow position:
               
chr16:42633627-42633999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
136, 113
               

               
Conread position:
               
247-623
               

               
Cow position:
               
chr16:5364018-5363638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
104, 260
               

               
Conread position:
               
247-626
               

               
Cow position:
               
chr16:49169264-49169639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 255
               

               
Conread position:
               
247-628
               

               
Cow position:
               
chr16:8811979-8812345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
230, 19
               

               
Conread position:
               
247-628
               

               
Cow position:
               
chr16:48340577-48340951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
143, 252
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr16:7499167-7498808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
229, 104
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr16:9973382-9973763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 121
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr16:15960173-15960555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 256
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr16:35188366-35187994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr16:37062283-37062653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr16:40562348-40561965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 17
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr16:42340313-42339941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 199
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr16:48494437-48494817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
247-636
               

               
Cow position:
               
chr16:29608626-29608251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
247-637
               

               
Cow position:
               
chr16:51869756-51869370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 147
               

               
Conread position:
               
247-644
               

               
Cow position:
               
chr16:47518963-47518576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
35, 144
               

               
Conread position:
               
247-652
               

               
Cow position:
               
chr16:16548726-16548334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
247-653
               

               
Cow position:
               
chr16:45785854-45785461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 175
               

               
Conread position:
               
248-455
               

               
Cow position:
               
chr16:44683541-44683754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
248-479
               

               
Cow position:
               
chr16:18052446-18052214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
152, 55
               

               
Conread position:
               
248-532
               

               
Cow position:
               
chr16:7550083-7549802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
146, 55
               

               
Conread position:
               
248-535
               

               
Cow position:
               
chr16:52133401-52133684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
224, 138
               

               
Conread position:
               
248-604
               

               
Cow position:
               
chr16:30036875-30037229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 89
               

               
Conread position:
               
248-628
               

               
Cow position:
               
chr16:22009266-22008886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
248-630
               

               
Cow position:
               
chr16:8933311-8933680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
248-646
               

               
Cow position:
               
chr16:20025557-20025165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 82
               

               
Conread position:
               
249-475
               

               
Cow position:
               
chr16:44580957-44581183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
141, 189
               

               
Conread position:
               
249-493
               

               
Cow position:
               
chr16:689818-689579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
138, 103
               

               
Conread position:
               
249-504
               

               
Cow position:
               
chr16:9445074-9444820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
143, 75
               

               
Conread position:
               
249-568
               

               
Cow position:
               
chr16:11085269-11085578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
148, 49
               

               
Conread position:
               
249-597
               

               
Cow position:
               
chr16:48493295-48492955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 250
               

               
Conread position:
               
249-607
               

               
Cow position:
               
chr16:54515833-54515489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
249-624
               

               
Cow position:
               
chr16:12169590-12169946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
206, 50
               

               
Conread position:
               
249-624
               

               
Cow position:
               
chr16:43505696-43506053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 82
               

               
Conread position:
               
249-626
               

               
Cow position:
               
chr16:28266916-28267267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
232, 28
               

               
Conread position:
               
249-626
               

               
Cow position:
               
chr16:51879889-51880263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
206, 50
               

               
Conread position:
               
249-627
               

               
Cow position:
               
chr16:42257562-42257197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
143, 55
               

               
Conread position:
               
249-630
               

               
Cow position:
               
chr16:19977078-19976704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
200, 50
               

               
Conread position:
               
249-631
               

               
Cow position:
               
chr16:23066769-23066406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
141, 67
               

               
Conread position:
               
249-631
               

               
Cow position:
               
chr16:35623136-35623512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 7
               

               
Conread position:
               
249-634
               

               
Cow position:
               
chr16:14758854-14758462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
249-634
               

               
Cow position:
               
chr16:51069798-51070194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 121
               

               
Conread position:
               
249-644
               

               
Cow position:
               
chr16:13181853-13181465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
249-646
               

               
Cow position:
               
chr16:4499543-4499164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 61
               

               
Conread position:
               
250-423
               

               
Cow position:
               
chr16:55945026-55945203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
250-449
               

               
Cow position:
               
chr16:3114653-3114451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
250-455
               

               
Cow position:
               
chr16:48545935-48545728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
250-470
               

               
Cow position:
               
chr16:10945327-10945538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
250-470
               

               
Cow position:
               
chr16:43674988-43674767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
250-479
               

               
Cow position:
               
chr16:21317479-21317712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
149, 184
               

               
Conread position:
               
250-480
               

               
Cow position:
               
chr16:17903531-17903767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
250-493
               

               
Cow position:
               
chr16:54342100-54341856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
250-539
               

               
Cow position:
               
chr16:25380381-25380669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
101, 150
               

               
Conread position:
               
250-550
               

               
Cow position:
               
chr16:38621069-38620777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
250-568
               

               
Cow position:
               
chr16:17627043-17626731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
250-603
               

               
Cow position:
               
chr16:5896532-5896185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
140, 53
               

               
Conread position:
               
250-623
               

               
Cow position:
               
chr16:37669623-37669982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
150, 251
               

               
Conread position:
               
250-628
               

               
Cow position:
               
chr16:18402800-18402437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
145, 30
               

               
Conread position:
               
250-630
               

               
Cow position:
               
chr16:8315080-8315436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 27
               

               
Conread position:
               
250-630
               

               
Cow position:
               
chr16:13698629-13698247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
122, 243
               

               
Conread position:
               
250-630
               

               
Cow position:
               
chr16:15809092-15808713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 102
               

               
Conread position:
               
250-630
               

               
Cow position:
               
chr16:23738294-23737923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 11
               

               
Conread position:
               
250-633
               

               
Cow position:
               
chr16:4059469-4059095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
127, 24
               

               
Conread position:
               
250-637
               

               
Cow position:
               
chr16:45610099-45609718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 110
               

               
Conread position:
               
250-645
               

               
Cow position:
               
chr16:13195225-13195609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
251-470
               

               
Cow position:
               
chr16:6270067-6269849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 140
               

               
Conread position:
               
251-486
               

               
Cow position:
               
chr16:47855051-47854818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
157, 26
               

               
Conread position:
               
251-505
               

               
Cow position:
               
chr16:23366353-23366099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
148, 81
               

               
Conread position:
               
251-535
               

               
Cow position:
               
chr16:54734348-54734068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
221, 36
               

               
Conread position:
               
251-560
               

               
Cow position:
               
chr16:10303638-10303943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
128, 53
               

               
Conread position:
               
251-574
               

               
Cow position:
               
chr16:53830479-53830794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
135, 79
               

               
Conread position:
               
251-633
               

               
Cow position:
               
chr16:13611342-13611709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 7
               

               
Conread position:
               
252-595
               

               
Cow position:
               
chr16:43105404-43105739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 62
               

               
Conread position:
               
255-449
               

               
Cow position:
               
chr16:22824725-22824917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
255-453
               

               
Cow position:
               
chr16:12501052-12501252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
144, 57
               

               
Conread position:
               
255-475
               

               
Cow position:
               
chr16:11940146-11939929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
255-529
               

               
Cow position:
               
chr16:27160755-27161024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
137, 205
               

               
Conread position:
               
255-659
               

               
Cow position:
               
chr16:11102712-11103115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
142, 246
               

               
Conread position:
               
256-617
               

               
Cow position:
               
chr16:45702864-45703224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
218, 124
               

               
Conread position:
               
256-630
               

               
Cow position:
               
chr16:22804490-22804842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
135, 116
               

               
Conread position:
               
257-487
               

               
Cow position:
               
chr16:37719265-37719031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
81, 5
               

               
Conread position:
               
258-440
               

               
Cow position:
               
chr16:38091117-38091302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
258-459
               

               
Cow position:
               
chr16:18072278-18072077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 38
               

               
Conread position:
               
258-594
               

               
Cow position:
               
chr16:12360867-12361197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
258-626
               

               
Cow position:
               
chr16:53627322-53627680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
132, 243
               

               
Conread position:
               
258-630
               

               
Cow position:
               
chr16:24826179-24825806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 245
               

               
Conread position:
               
258-633
               

               
Cow position:
               
chr16:33226433-33226796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
140, 63
               

               
Conread position:
               
258-646
               

               
Cow position:
               
chr16:11105663-11105281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 235
               

               
Conread position:
               
259-626
               

               
Cow position:
               
chr16:7456361-7456723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
259-626
               

               
Cow position:
               
chr16:39394678-39394320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 122
               

               
Conread position:
               
259-644
               

               
Cow position:
               
chr16:23025444-23025071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
131, 18
               

               
Conread position:
               
259-644
               

               
Cow position:
               
chr16:55586506-55586876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
196, 37
               

               
Conread position:
               
260-470
               

               
Cow position:
               
chr16:26323414-26323622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
140, 150
               

               
Conread position:
               
260-600
               

               
Cow position:
               
chr16:27261847-27262176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
260-623
               

               
Cow position:
               
chr16:43661556-43661198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 181
               

               
Conread position:
               
262-442
               

               
Cow position:
               
chr16:31426443-31426264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
262-636
               

               
Cow position:
               
chr16:4698886-4699237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 129
               

               
Conread position:
               
263-637
               

               
Cow position:
               
chr16:52790154-52789794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
131, 6
               

               
Conread position:
               
264-624
               

               
Cow position:
               
chr16:56875564-56875908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
217, 87
               

               
Conread position:
               
264-626
               

               
Cow position:
               
chr16:25965599-25965249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
133, 74
               

               
Conread position:
               
264-635
               

               
Cow position:
               
chr16:18141227-18141595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
131, 69
               

               
Conread position:
               
266-626
               

               
Cow position:
               
chr16:50417599-50417945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
270-618
               

               
Cow position:
               
chr16:37380364-37380022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
120, 221
               

               
Conread position:
               
272-493
               

               
Cow position:
               
chr16:30369439-30369221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 133
               

               
Conread position:
               
272-561
               

               
Cow position:
               
chr16:46627749-46628028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
115, 84
               

               
Conread position:
               
272-607
               

               
Cow position:
               
chr16:32327750-32327414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
118, 155
               

               
Conread position:
               
272-651
               

               
Cow position:
               
chr16:52889319-52889692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
273-477
               

               
Cow position:
               
chr16:19047343-19047550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
273-493
               

               
Cow position:
               
chr16:33267804-33267584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
199, 87
               

               
Conread position:
               
273-594
               

               
Cow position:
               
chr16:5351751-5352056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 100
               

               
Conread position:
               
273-598
               

               
Cow position:
               
chr16:15504429-15504755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
123, 227
               

               
Conread position:
               
273-607
               

               
Cow position:
               
chr16:53048643-53048313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
113, 127
               

               
Conread position:
               
273-625
               

               
Cow position:
               
chr16:35758293-35757958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
199, 131
               

               
Conread position:
               
273-626
               

               
Cow position:
               
chr16:23483373-23483031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
199, 117
               

               
Conread position:
               
273-629
               

               
Cow position:
               
chr16:601036-600685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
198, 30
               

               
Conread position:
               
273-630
               

               
Cow position:
               
chr16:675581-675233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 160
               

               
Conread position:
               
273-630
               

               
Cow position:
               
chr16:7077652-7077999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
123, 221
               

               
Conread position:
               
273-630
               

               
Cow position:
               
chr16:29380341-29379993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 118
               

               
Conread position:
               
273-630
               

               
Cow position:
               
chr16:39278979-39279339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
128, 150
               

               
Conread position:
               
273-630
               

               
Cow position:
               
chr16:46752180-46752540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
116, 221
               

               
Conread position:
               
273-636
               

               
Cow position:
               
chr16:35343382-35343742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
199, 117
               

               
Conread position:
               
273-644
               

               
Cow position:
               
chr16:37117165-37116798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
117, 42
               

               
Conread position:
               
274-437
               

               
Cow position:
               
chr16:15752793-15752629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
280-459
               

               
Cow position:
               
chr16:42176730-42176547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 137
               

               
Conread position:
               
280-498
               

               
Cow position:
               
chr16:53089267-53089478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
197, 50
               

               
Conread position:
               
280-535
               

               
Cow position:
               
chr16:4902672-4902420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
104, 198
               

               
Conread position:
               
280-535
               

               
Cow position:
               
chr16:10592515-10592266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
121, 46
               

               
Conread position:
               
280-535
               

               
Cow position:
               
chr16:50521560-50521309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
120, 9
               

               
Conread position:
               
280-550
               

               
Cow position:
               
chr16:45693229-45692960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
117, 19
               

               
Conread position:
               
280-567
               

               
Cow position:
               
chr16:44722948-44723217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
280-623
               

               
Cow position:
               
chr16:570836-571170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
280-626
               

               
Cow position:
               
chr16:10857536-10857881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 168
               

               
Conread position:
               
280-626
               

               
Cow position:
               
chr16:16096820-16096482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
110, 50
               

               
Conread position:
               
280-628
               

               
Cow position:
               
chr16:27013985-27013641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
57, 158
               

               
Conread position:
               
281-490
               

               
Cow position:
               
chr16:47643497-47643286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
118, 138
               

               
Conread position:
               
281-626
               

               
Cow position:
               
chr16:39513993-39514336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
282-626
               

               
Cow position:
               
chr16:5727015-5726672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
102, 41
               

               
Conread position:
               
284-622
               

               
Cow position:
               
chr16:53891706-53892034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 71
               

               
Conread position:
               
285-475
               

               
Cow position:
               
chr16:50667370-50667173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
285-618
               

               
Cow position:
               
chr16:11806750-11806433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 139
               

               
Conread position:
               
286-624
               

               
Cow position:
               
chr16:13752054-13752378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
191, 96
               

               
Conread position:
               
286-630
               

               
Cow position:
               
chr16:28880017-28879651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
148, 42
               

               
Conread position:
               
286-636
               

               
Cow position:
               
chr16:14361181-14360840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
253, 119
               

               
Conread position:
               
287-560
               

               
Cow position:
               
chr16:54084113-54083843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
113, 216
               

               
Conread position:
               
288-497
               

               
Cow position:
               
chr16:28692653-28692856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
289-630
               

               
Cow position:
               
chr16:38903384-38903695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
290-626
               

               
Cow position:
               
chr16:35937411-35937079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
296-493
               

               
Cow position:
               
chr16:41763240-41763038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 79
               

               
Conread position:
               
296-566
               

               
Cow position:
               
chr16:55152122-55151868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
296-608
               

               
Cow position:
               
chr16:13232881-13233183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 192
               

               
Conread position:
               
297-625
               

               
Cow position:
               
chr16:53553652-53553973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
243, 93
               

               
Conread position:
               
298-554
               

               
Cow position:
               
chr16:24747352-24747117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 92
               

               
Conread position:
               
298-556
               

               
Cow position:
               
chr16:21369550-21369293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
299-603
               

               
Cow position:
               
chr16:37924112-37924401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
299-625
               

               
Cow position:
               
chr16:31978121-31978444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
97, 132
               

               
Conread position:
               
299-626
               

               
Cow position:
               
chr16:33299459-33299134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
97, 74
               

               
Conread position:
               
299-626
               

               
Cow position:
               
chr16:34168651-34168338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
173, 91
               

               
Conread position:
               
299-626
               

               
Cow position:
               
chr16:35195548-35195867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
87, 99
               

               
Conread position:
               
299-628
               

               
Cow position:
               
chr16:42217625-42217949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
181, 95
               

               
Conread position:
               
299-630
               

               
Cow position:
               
chr16:4981312-4981632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
68, 199
               

               
Conread position:
               
299-630
               

               
Cow position:
               
chr16:28922838-28922528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
178, 76
               

               
Conread position:
               
299-630
               

               
Cow position:
               
chr16:39646610-39646299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
84, 143
               

               
Conread position:
               
300-493
               

               
Cow position:
               
chr16:38191537-38191340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
300-533
               

               
Cow position:
               
chr16:10650824-10651057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 196
               

               
Conread position:
               
300-630
               

               
Cow position:
               
chr16:22129610-22129931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
300-631
               

               
Cow position:
               
chr16:46253621-46253951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 207
               

               
Conread position:
               
303-630
               

               
Cow position:
               
chr16:28833904-28833581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
91, 155
               

               
Conread position:
               
303-637
               

               
Cow position:
               
chr16:5477298-5477615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
304-508
               

               
Cow position:
               
chr16:22860709-22860908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
177, 91
               

               
Conread position:
               
311-568
               

               
Cow position:
               
chr16:39237999-39237744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
87, 142
               

               
Conread position:
               
311-628
               

               
Cow position:
               
chr16:21905215-21904904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
89, 45
               

               
Conread position:
               
311-631
               

               
Cow position:
               
chr16:30515536-30515842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
76, 107
               

               
Conread position:
               
312-633
               

               
Cow position:
               
chr16:30143154-30143476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 86
               

               
Conread position:
               
314-567
               

               
Cow position:
               
chr16:49404109-49404353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 122
               

               
Conread position:
               
314-631
               

               
Cow position:
               
chr16:4145113-4144804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
320-535
               

               
Cow position:
               
chr16:38119406-38119614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
152, 79
               

               
Conread position:
               
321-535
               

               
Cow position:
               
chr16:13792615-13792825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 157
               

               
Conread position:
               
321-630
               

               
Cow position:
               
chr16:56845861-56846159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
218, 64
               

               
Conread position:
               
322-601
               

               
Cow position:
               
chr16:26342308-26342045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
322-605
               

               
Cow position:
               
chr16:45535220-45534947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 94
               

               
Conread position:
               
322-622
               

               
Cow position:
               
chr16:24672315-24672612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 116
               

               
Conread position:
               
323-605
               

               
Cow position:
               
chr16:41608656-41608372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
59, 52
               

               
Conread position:
               
325-607
               

               
Cow position:
               
chr16:35168769-35168487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 14
               

               
Conread position:
               
327-630
               

               
Cow position:
               
chr16:34809941-34809640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
328-538
               

               
Cow position:
               
chr16:9136213-9136004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
332-449
               

               
Cow position:
               
chr16:30371623-30371507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
332-493
               

               
Cow position:
               
chr16:14699953-14699787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
332-493
               

               
Cow position:
               
chr16:30135861-30136026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
332-597
               

               
Cow position:
               
chr16:27249436-27249181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
332-601
               

               
Cow position:
               
chr16:13973254-13973514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
58, 112
               

               
Conread position:
               
332-607
               

               
Cow position:
               
chr16:30096099-30096368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
140, 76
               

               
Conread position:
               
332-621
               

               
Cow position:
               
chr16:6692569-6692866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 151
               

               
Conread position:
               
332-625
               

               
Cow position:
               
chr16:24228320-24228606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
139, 65
               

               
Conread position:
               
332-626
               

               
Cow position:
               
chr16:17665665-17665378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
140, 60
               

               
Conread position:
               
332-626
               

               
Cow position:
               
chr16:21542793-21542501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
332-630
               

               
Cow position:
               
chr16:4372461-4372757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 121
               

               
Conread position:
               
332-636
               

               
Cow position:
               
chr16:7082694-7083000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
19, 175
               

               
Conread position:
               
333-630
               

               
Cow position:
               
chr16:13791548-13791251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
65, 106
               

               
Conread position:
               
335-479
               

               
Cow position:
               
chr16:44676903-44676756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
335-552
               

               
Cow position:
               
chr16:7496226-7496016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
44, 85
               

               
Conread position:
               
335-622
               

               
Cow position:
               
chr16:56912684-56912974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
22, 166
               

               
Conread position:
               
335-626
               

               
Cow position:
               
chr16:27005232-27004943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
50, 66
               

               
Conread position:
               
335-636
               

               
Cow position:
               
chr16:4712929-4712634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
136, 115
               

               
Conread position:
               
337-630
               

               
Cow position:
               
chr16:23990454-23990748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 7
               

               
Conread position:
               
338-478
               

               
Cow position:
               
chr16:30614954-30615095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
338-624
               

               
Cow position:
               
chr16:15746827-15747106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
338-625
               

               
Cow position:
               
chr16:51399723-51400002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
338-626
               

               
Cow position:
               
chr16:55308515-55308786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
338-630
               

               
Cow position:
               
chr16:50189565-50189851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
339-493
               

               
Cow position:
               
chr16:42072708-42072861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
339-557
               

               
Cow position:
               
chr16:8236297-8236507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 134
               

               
Conread position:
               
340-559
               

               
Cow position:
               
chr16:33230100-33229883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 156
               

               
Conread position:
               
340-638
               

               
Cow position:
               
chr16:22868154-22868446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
164, 83
               

               
Conread position:
               
344-604
               

               
Cow position:
               
chr16:11568098-11568345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
344-607
               

               
Cow position:
               
chr16:47336755-47336492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 155
               

               
Conread position:
               
344-626
               

               
Cow position:
               
chr16:32119132-32118852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
133, 158
               

               
Conread position:
               
344-626
               

               
Cow position:
               
chr16:56150316-56150056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
128, 59
               

               
Conread position:
               
344-630
               

               
Cow position:
               
chr16:39417100-39417370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
345-629
               

               
Cow position:
               
chr16:16424591-16424864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
132, 34
               

               
Conread position:
               
345-630
               

               
Cow position:
               
chr16:33508072-33507802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
346-493
               

               
Cow position:
               
chr16:16280430-16280577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
132, 48
               

               
Conread position:
               
347-568
               

               
Cow position:
               
chr16:7785154-7784940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
347-607
               

               
Cow position:
               
chr16:45603686-45603441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
125, 59
               

               
Conread position:
               
347-626
               

               
Cow position:
               
chr16:26501175-26500904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
49, 157
               

               
Conread position:
               
347-626
               

               
Cow position:
               
chr16:42253541-42253827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 165
               

               
Conread position:
               
347-630
               

               
Cow position:
               
chr16:29067178-29066907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 49
               

               
Conread position:
               
347-630
               

               
Cow position:
               
chr16:41037707-41037423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
144, 51
               

               
Conread position:
               
347-631
               

               
Cow position:
               
chr16:8807076-8807352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
127, 70
               

               
Conread position:
               
347-636
               

               
Cow position:
               
chr16:30311089-30311376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
49, 154
               

               
Conread position:
               
348-651
               

               
Cow position:
               
chr16:44973510-44973214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
349-607
               

               
Cow position:
               
chr16:11815589-11815844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
165, 47
               

               
Conread position:
               
350-493
               

               
Cow position:
               
chr16:26068946-26068800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
350-606
               

               
Cow position:
               
chr16:33411483-33411222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
95, 158
               

               
Conread position:
               
350-624
               

               
Cow position:
               
chr16:4503296-4503025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
77, 144
               

               
Conread position:
               
350-630
               

               
Cow position:
               
chr16:18496156-18496429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
187, 30
               

               
Conread position:
               
350-643
               

               
Cow position:
               
chr16:4103148-4103428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
351-608
               

               
Cow position:
               
chr16:47620392-47620141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
351-631
               

               
Cow position:
               
chr16:47509964-47510230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 95
               

               
Conread position:
               
351-644
               

               
Cow position:
               
chr16:53613323-53613024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 118
               

               
Conread position:
               
354-618
               

               
Cow position:
               
chr16:33588677-33588419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
356-605
               

               
Cow position:
               
chr16:14028621-14028851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
356-630
               

               
Cow position:
               
chr16:31159564-31159834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 147
               

               
Conread position:
               
356-633
               

               
Cow position:
               
chr16:9790623-9790895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
45, 154
               

               
Conread position:
               
357-607
               

               
Cow position:
               
chr16:23810918-23810684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 33
               

               
Conread position:
               
360-568
               

               
Cow position:
               
chr16:10462520-10462716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 34
               

               
Conread position:
               
360-623
               

               
Cow position:
               
chr16:43804497-43804243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
360-625
               

               
Cow position:
               
chr16:30209754-30209507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
110, 35
               

               
Conread position:
               
360-630
               

               
Cow position:
               
chr16:3633300-3633031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
362-604
               

               
Cow position:
               
chr16:4875995-4875763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
363-633
               

               
Cow position:
               
chr16:25287690-25287954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
364-629
               

               
Cow position:
               
chr16:39385410-39385141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
372-597
               

               
Cow position:
               
chr16:51530975-51531201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 136
               

               
Conread position:
               
379-629
               

               
Cow position:
               
chr16:32384839-32385081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
218, 11
               

               
Conread position:
               
381-586
               

               
Cow position:
               
chr16:45676872-45677069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
384-620
               

               
Cow position:
               
chr16:47729001-47728772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
384-644
               

               
Cow position:
               
chr16:30572627-30572886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
386-626
               

               
Cow position:
               
chr16:5243945-5243706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
386-627
               

               
Cow position:
               
chr16:14799769-14799998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
386-636
               

               
Cow position:
               
chr16:34210431-34210680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
393-532
               

               
Cow position:
               
chr16:30045889-30045750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 107
               

               
Conread position:
               
394-630
               

               
Cow position:
               
chr16:28192038-28191806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 106
               

               
Conread position:
               
395-607
               

               
Cow position:
               
chr16:4134840-4134628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
78, 104
               

               
Conread position:
               
396-561
               

               
Cow position:
               
chr16:3821506-3821341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 103
               

               
Conread position:
               
396-620
               

               
Cow position:
               
chr16:55042590-55042816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
114, 85
               

               
Conread position:
               
397-624
               

               
Cow position:
               
chr16:16177781-16177561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
206, 79
               

               
Conread position:
               
397-630
               

               
Cow position:
               
chr16:7997654-7997874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
204, 50
               

               
Conread position:
               
398-626
               

               
Cow position:
               
chr16:30939699-30939477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
398-631
               

               
Cow position:
               
chr16:33752161-33751936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
83, 99
               

               
Conread position:
               
405-598
               

               
Cow position:
               
chr16:43323953-43324142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
131, 89
               

               
Conread position:
               
408-630
               

               
Cow position:
               
chr16:24403695-24403469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
409-630
               

               
Cow position:
               
chr16:47662667-47662452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
63, 84
               

               
Conread position:
               
417-628
               

               
Cow position:
               
chr16:37442180-37442387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
418-646
               

               
Cow position:
               
chr16:25484309-25484089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
420-630
               

               
Cow position:
               
chr16:901940-902148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
420-644
               

               
Cow position:
               
chr16:11422253-11422032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 68
               
Show alignments to all cow chromosomes.