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Cow genome map

           
Conread name:
           
Ova1-OVRM10096F06
        

               
Conread position:
               
124-630
               

               
Cow position:
               
chr18:23446848-23447375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
128-479
               

               
Cow position:
               
chr18:36768609-36768954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
27, 120
               

               
Conread position:
               
130-426
               

               
Cow position:
               
chr18:22568866-22569164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
130-485
               

               
Cow position:
               
chr18:728224-727882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 92
               

               
Conread position:
               
130-633
               

               
Cow position:
               
chr18:56181257-56181751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
135-493
               

               
Cow position:
               
chr18:30359951-30360299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
143-622
               

               
Cow position:
               
chr18:6609658-6610143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 364
               

               
Conread position:
               
143-626
               

               
Cow position:
               
chr18:38985879-38985398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
200, 88
               

               
Conread position:
               
150-389
               

               
Cow position:
               
chr18:40047318-40047557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
26, 86
               

               
Conread position:
               
150-568
               

               
Cow position:
               
chr18:19364095-19363700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
155, 43
               

               
Conread position:
               
152-603
               

               
Cow position:
               
chr18:34324789-34325226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
241, 49
               

               
Conread position:
               
154-644
               

               
Cow position:
               
chr18:20270834-20271327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
95, 165
               

               
Conread position:
               
156-637
               

               
Cow position:
               
chr18:45903721-45904192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 175
               

               
Conread position:
               
158-389
               

               
Cow position:
               
chr18:45558316-45558088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
175, 74
               

               
Conread position:
               
158-468
               

               
Cow position:
               
chr18:22055686-22056018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
158-568
               

               
Cow position:
               
chr18:42479408-42479823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
158-623
               

               
Cow position:
               
chr18:5578468-5578018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
214, 73
               

               
Conread position:
               
158-629
               

               
Cow position:
               
chr18:19849601-19850038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 10
               

               
Conread position:
               
159-367
               

               
Cow position:
               
chr18:48407904-48407702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
159-382
               

               
Cow position:
               
chr18:6075238-6075447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
159-405
               

               
Cow position:
               
chr18:24719479-24719239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
159-445
               

               
Cow position:
               
chr18:42431442-42431728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
100, 42
               

               
Conread position:
               
159-458
               

               
Cow position:
               
chr18:4489730-4490024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
159-462
               

               
Cow position:
               
chr18:31711405-31711698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
165, 71
               

               
Conread position:
               
159-475
               

               
Cow position:
               
chr18:54130170-54130479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
212, 51
               

               
Conread position:
               
159-479
               

               
Cow position:
               
chr18:1571069-1571386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr18:51515094-51515428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
202, 11
               

               
Conread position:
               
159-493
               

               
Cow position:
               
chr18:1954406-1954754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
159-493
               

               
Cow position:
               
chr18:50205626-50205956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
202, 11
               

               
Conread position:
               
159-532
               

               
Cow position:
               
chr18:4264225-4264592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
159-535
               

               
Cow position:
               
chr18:7109302-7108924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
159-553
               

               
Cow position:
               
chr18:30341010-30341396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 182
               

               
Conread position:
               
159-562
               

               
Cow position:
               
chr18:20126464-20126076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 97
               

               
Conread position:
               
159-597
               

               
Cow position:
               
chr18:12023466-12023893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
7, 116
               

               
Conread position:
               
159-624
               

               
Cow position:
               
chr18:26334653-26335103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
232, 11
               

               
Conread position:
               
159-626
               

               
Cow position:
               
chr18:3158410-3158890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 234
               

               
Conread position:
               
159-626
               

               
Cow position:
               
chr18:28657748-28658203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
159-629
               

               
Cow position:
               
chr18:51405745-51406195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 34
               

               
Conread position:
               
160-380
               

               
Cow position:
               
chr18:19961965-19962193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
79, 193
               

               
Conread position:
               
160-389
               

               
Cow position:
               
chr18:38937991-38937763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
160-480
               

               
Cow position:
               
chr18:29474909-29474590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 92
               

               
Conread position:
               
160-493
               

               
Cow position:
               
chr18:19193201-19193530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 71
               

               
Conread position:
               
160-493
               

               
Cow position:
               
chr18:30586065-30586384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 71
               

               
Conread position:
               
160-601
               

               
Cow position:
               
chr18:43283585-43284022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 60
               

               
Conread position:
               
160-606
               

               
Cow position:
               
chr18:31672347-31672776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 71
               

               
Conread position:
               
160-626
               

               
Cow position:
               
chr18:18918792-18919242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 95
               

               
Conread position:
               
160-630
               

               
Cow position:
               
chr18:9010876-9010439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
160-632
               

               
Cow position:
               
chr18:50382421-50381962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
161-346
               

               
Cow position:
               
chr18:45897897-45897716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
161-363
               

               
Cow position:
               
chr18:19809513-19809715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
161-370
               

               
Cow position:
               
chr18:4851315-4851519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
161-388
               

               
Cow position:
               
chr18:19765356-19765131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
161-388
               

               
Cow position:
               
chr18:51192578-51192798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
161-435
               

               
Cow position:
               
chr18:24508063-24508344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
189, 43
               

               
Conread position:
               
161-441
               

               
Cow position:
               
chr18:43796789-43797065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
161-451
               

               
Cow position:
               
chr18:33883950-33883663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
161-466
               

               
Cow position:
               
chr18:25598063-25598376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 113
               

               
Conread position:
               
161-492
               

               
Cow position:
               
chr18:32410845-32411166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
161-493
               

               
Cow position:
               
chr18:5766580-5766248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
161-493
               

               
Cow position:
               
chr18:8300177-8299849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
161-493
               

               
Cow position:
               
chr18:15613694-15614024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
267, 70
               

               
Conread position:
               
161-493
               

               
Cow position:
               
chr18:43555343-43555689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
161-535
               

               
Cow position:
               
chr18:7414864-7415230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
143, 70
               

               
Conread position:
               
161-535
               

               
Cow position:
               
chr18:42431922-42432294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
126, 71
               

               
Conread position:
               
161-565
               

               
Cow position:
               
chr18:305895-306292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
161-603
               

               
Cow position:
               
chr18:11691236-11691678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 157
               

               
Conread position:
               
161-607
               

               
Cow position:
               
chr18:32883462-32883030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 42
               

               
Conread position:
               
161-608
               

               
Cow position:
               
chr18:12059164-12058746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 70
               

               
Conread position:
               
161-626
               

               
Cow position:
               
chr18:6310250-6309791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 96
               

               
Conread position:
               
161-626
               

               
Cow position:
               
chr18:21195177-21195628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
164, 27
               

               
Conread position:
               
161-626
               

               
Cow position:
               
chr18:55499240-55498777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 139
               

               
Conread position:
               
161-628
               

               
Cow position:
               
chr18:12117683-12118136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
154, 120
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr18:9558136-9557688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
234, 51
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr18:16841900-16842358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
206, 67
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr18:26006961-26006512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr18:39662951-39662492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 123
               

               
Conread position:
               
161-631
               

               
Cow position:
               
chr18:7650145-7649700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
161-636
               

               
Cow position:
               
chr18:9974160-9974624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 107
               

               
Conread position:
               
161-636
               

               
Cow position:
               
chr18:11867508-11867052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 69
               

               
Conread position:
               
161-637
               

               
Cow position:
               
chr18:28101804-28101326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
161-645
               

               
Cow position:
               
chr18:1495481-1494996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
161-646
               

               
Cow position:
               
chr18:51271593-51272049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
136, 53
               

               
Conread position:
               
162-389
               

               
Cow position:
               
chr18:35888919-35889154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 58
               

               
Conread position:
               
162-389
               

               
Cow position:
               
chr18:56183331-56183562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 175
               

               
Conread position:
               
162-493
               

               
Cow position:
               
chr18:8170922-8171249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
228, 69
               

               
Conread position:
               
162-626
               

               
Cow position:
               
chr18:10905016-10904557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
229, 98
               

               
Conread position:
               
162-626
               

               
Cow position:
               
chr18:46452714-46453168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
177, 69
               

               
Conread position:
               
162-630
               

               
Cow position:
               
chr18:16043981-16044447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
162-630
               

               
Cow position:
               
chr18:51757263-51756805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 136
               

               
Conread position:
               
162-635
               

               
Cow position:
               
chr18:55120036-55119576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 37
               

               
Conread position:
               
162-636
               

               
Cow position:
               
chr18:3180578-3180120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 14
               

               
Conread position:
               
162-636
               

               
Cow position:
               
chr18:9366091-9365613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 345
               

               
Conread position:
               
162-646
               

               
Cow position:
               
chr18:46048923-46048456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 225
               

               
Conread position:
               
163-399
               

               
Cow position:
               
chr18:52251686-52251926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
163-447
               

               
Cow position:
               
chr18:1931291-1931572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
227, 167
               

               
Conread position:
               
163-447
               

               
Cow position:
               
chr18:12584676-12584961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
218, 62
               

               
Conread position:
               
163-491
               

               
Cow position:
               
chr18:23623462-23623796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
89, 241
               

               
Conread position:
               
163-493
               

               
Cow position:
               
chr18:5072249-5072577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 68
               

               
Conread position:
               
163-493
               

               
Cow position:
               
chr18:55747856-55747519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 140
               

               
Conread position:
               
163-494
               

               
Cow position:
               
chr18:43950996-43950658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
88, 100
               

               
Conread position:
               
163-495
               

               
Cow position:
               
chr18:46276131-46276475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
88, 115
               

               
Conread position:
               
163-567
               

               
Cow position:
               
chr18:23714721-23715119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 67
               

               
Conread position:
               
163-609
               

               
Cow position:
               
chr18:3044625-3044160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
68, 182
               

               
Conread position:
               
163-609
               

               
Cow position:
               
chr18:10322964-10322527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 67
               

               
Conread position:
               
163-630
               

               
Cow position:
               
chr18:7965400-7964938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
68, 118
               

               
Conread position:
               
163-646
               

               
Cow position:
               
chr18:29065224-29065681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
203, 67
               

               
Conread position:
               
164-477
               

               
Cow position:
               
chr18:24266236-24266557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chr18:43014705-43014928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
166-624
               

               
Cow position:
               
chr18:2270352-2270790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 99
               

               
Conread position:
               
167-480
               

               
Cow position:
               
chr18:12273818-12273507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
231, 43
               

               
Conread position:
               
167-630
               

               
Cow position:
               
chr18:55505566-55505108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
167-640
               

               
Cow position:
               
chr18:51298625-51298178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
227, 59
               

               
Conread position:
               
168-453
               

               
Cow position:
               
chr18:23163057-23162769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
52, 171
               

               
Conread position:
               
168-626
               

               
Cow position:
               
chr18:37023374-37023845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 349
               

               
Conread position:
               
168-634
               

               
Cow position:
               
chr18:22120722-22121181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
168-644
               

               
Cow position:
               
chr18:42747762-42747289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 113
               

               
Conread position:
               
169-361
               

               
Cow position:
               
chr18:41702996-41702806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 161
               

               
Conread position:
               
169-364
               

               
Cow position:
               
chr18:31159110-31159307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
169-386
               

               
Cow position:
               
chr18:50359487-50359276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
169-389
               

               
Cow position:
               
chr18:2777602-2777812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
169-389
               

               
Cow position:
               
chr18:31556995-31557219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
169-392
               

               
Cow position:
               
chr18:5647970-5647751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
169-435
               

               
Cow position:
               
chr18:28930479-28930745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 62
               

               
Conread position:
               
169-470
               

               
Cow position:
               
chr18:10214029-10214336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
143, 226
               

               
Conread position:
               
169-477
               

               
Cow position:
               
chr18:49038616-49038314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
232, 24
               

               
Conread position:
               
169-479
               

               
Cow position:
               
chr18:5632427-5632116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
221, 85
               

               
Conread position:
               
169-489
               

               
Cow position:
               
chr18:17390828-17391137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 146
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr18:33896252-33896592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr18:39811421-39811735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 195
               

               
Conread position:
               
169-498
               

               
Cow position:
               
chr18:48713704-48713380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
229, 62
               

               
Conread position:
               
169-569
               

               
Cow position:
               
chr18:18961670-18962072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
169-571
               

               
Cow position:
               
chr18:3212042-3211632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 329
               

               
Conread position:
               
169-601
               

               
Cow position:
               
chr18:7956311-7955878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
169-622
               

               
Cow position:
               
chr18:12270674-12270209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 179
               

               
Conread position:
               
169-622
               

               
Cow position:
               
chr18:40759383-40758931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
169-623
               

               
Cow position:
               
chr18:7966406-7965977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
169-625
               

               
Cow position:
               
chr18:43806615-43806163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
169-626
               

               
Cow position:
               
chr18:51712558-51712998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr18:4884357-4884808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 107
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr18:9029775-9029325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 225
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr18:12775619-12776066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
85, 110
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr18:20641339-20641778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
279, 60
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr18:29648942-29648493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
113, 61
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr18:44262785-44262330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 62
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr18:9089853-9089411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
169-633
               

               
Cow position:
               
chr18:29372032-29371572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
169-633
               

               
Cow position:
               
chr18:55692980-55692526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
169-636
               

               
Cow position:
               
chr18:11233583-11233132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 117
               

               
Conread position:
               
169-637
               

               
Cow position:
               
chr18:49100223-49100672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
207, 62
               

               
Conread position:
               
170-459
               

               
Cow position:
               
chr18:53053068-53053370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 125
               

               
Conread position:
               
170-490
               

               
Cow position:
               
chr18:4556003-4556330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 166
               

               
Conread position:
               
170-568
               

               
Cow position:
               
chr18:4495729-4496119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
226, 37
               

               
Conread position:
               
170-646
               

               
Cow position:
               
chr18:3422848-3422411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
231, 61
               

               
Conread position:
               
171-382
               

               
Cow position:
               
chr18:42427776-42427568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
171-626
               

               
Cow position:
               
chr18:20173977-20174419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
171-631
               

               
Cow position:
               
chr18:28793920-28794360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
308, 37
               

               
Conread position:
               
171-634
               

               
Cow position:
               
chr18:2592000-2592470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 167
               

               
Conread position:
               
171-644
               

               
Cow position:
               
chr18:36264621-36265090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 37
               

               
Conread position:
               
171-644
               

               
Cow position:
               
chr18:39114958-39115451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
172-492
               

               
Cow position:
               
chr18:3193868-3193541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
176-484
               

               
Cow position:
               
chr18:51643214-51643520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 69
               

               
Conread position:
               
176-509
               

               
Cow position:
               
chr18:42290179-42290501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
176-552
               

               
Cow position:
               
chr18:247542-247902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 79
               

               
Conread position:
               
177-534
               

               
Cow position:
               
chr18:18369195-18369563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
26, 183
               

               
Conread position:
               
177-630
               

               
Cow position:
               
chr18:26999043-26998571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 203
               

               
Conread position:
               
179-388
               

               
Cow position:
               
chr18:47565967-47565769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
179-480
               

               
Cow position:
               
chr18:39623956-39623651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
60, 289
               

               
Conread position:
               
179-490
               

               
Cow position:
               
chr18:35874230-35873913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
179-602
               

               
Cow position:
               
chr18:11184091-11183676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
195, 140
               

               
Conread position:
               
179-621
               

               
Cow position:
               
chr18:37381939-37382381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 75
               

               
Conread position:
               
179-630
               

               
Cow position:
               
chr18:55788841-55789285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 99
               

               
Conread position:
               
182-442
               

               
Cow position:
               
chr18:24759510-24759768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
182-493
               

               
Cow position:
               
chr18:22143382-22143700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
211, 47
               

               
Conread position:
               
194-626
               

               
Cow position:
               
chr18:51691327-51691757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
201-439
               

               
Cow position:
               
chr18:46647033-46647258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
206-532
               

               
Cow position:
               
chr18:858950-858611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
231-630
               

               
Cow position:
               
chr18:36459030-36458641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 77
               

               
Conread position:
               
232-630
               

               
Cow position:
               
chr18:35012222-35012599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 22
               

               
Conread position:
               
232-641
               

               
Cow position:
               
chr18:21939452-21939052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
174, 77
               

               
Conread position:
               
232-646
               

               
Cow position:
               
chr18:17334323-17334726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
212, 65
               

               
Conread position:
               
233-485
               

               
Cow position:
               
chr18:22274739-22274991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
235-601
               

               
Cow position:
               
chr18:25984482-25984840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 29
               

               
Conread position:
               
237-479
               

               
Cow position:
               
chr18:51594711-51594951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
240-421
               

               
Cow position:
               
chr18:56301982-56301798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
150, 85
               

               
Conread position:
               
240-424
               

               
Cow position:
               
chr18:2619123-2619307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
240-644
               

               
Cow position:
               
chr18:4578401-4578776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
241, 16
               

               
Conread position:
               
241-490
               

               
Cow position:
               
chr18:9154977-9154723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
244-470
               

               
Cow position:
               
chr18:48242278-48242049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
47, 101
               

               
Conread position:
               
244-493
               

               
Cow position:
               
chr18:38607307-38607059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
151, 64
               

               
Conread position:
               
244-630
               

               
Cow position:
               
chr18:11377450-11377072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 68
               

               
Conread position:
               
245-482
               

               
Cow position:
               
chr18:52855140-52854898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
245-524
               

               
Cow position:
               
chr18:21740730-21741004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
232, 139
               

               
Conread position:
               
245-528
               

               
Cow position:
               
chr18:27109207-27109491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
150, 256
               

               
Conread position:
               
245-630
               

               
Cow position:
               
chr18:22214573-22214193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 205
               

               
Conread position:
               
245-630
               

               
Cow position:
               
chr18:45104355-45104739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
246-408
               

               
Cow position:
               
chr18:24342927-24342766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
246-451
               

               
Cow position:
               
chr18:47966843-47967045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
161, 91
               

               
Conread position:
               
246-493
               

               
Cow position:
               
chr18:1585029-1585282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
246-634
               

               
Cow position:
               
chr18:21266591-21266211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 194
               

               
Conread position:
               
246-647
               

               
Cow position:
               
chr18:25647164-25647559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
247-369
               

               
Cow position:
               
chr18:47410626-47410504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
247-426
               

               
Cow position:
               
chr18:48962019-48961837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
247-454
               

               
Cow position:
               
chr18:4872146-4871949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
193, 48
               

               
Conread position:
               
247-468
               

               
Cow position:
               
chr18:4203847-4204059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
247-474
               

               
Cow position:
               
chr18:19883616-19883385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
247-507
               

               
Cow position:
               
chr18:16997337-16997074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
143, 192
               

               
Conread position:
               
247-528
               

               
Cow position:
               
chr18:19896368-19896650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
143, 249
               

               
Conread position:
               
247-529
               

               
Cow position:
               
chr18:36746176-36746450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
201, 150
               

               
Conread position:
               
247-564
               

               
Cow position:
               
chr18:51392560-51392873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
153, 90
               

               
Conread position:
               
247-605
               

               
Cow position:
               
chr18:5711570-5711935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
172, 97
               

               
Conread position:
               
247-606
               

               
Cow position:
               
chr18:30794509-30794165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
125, 81
               

               
Conread position:
               
247-619
               

               
Cow position:
               
chr18:56184018-56183656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
230, 127
               

               
Conread position:
               
247-624
               

               
Cow position:
               
chr18:21192331-21192697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
128, 38
               

               
Conread position:
               
247-626
               

               
Cow position:
               
chr18:11322679-11322300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
151, 192
               

               
Conread position:
               
247-628
               

               
Cow position:
               
chr18:50082174-50082537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
230, 142
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr18:10656522-10656153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
91, 179
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr18:19273013-19273394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
146, 203
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr18:29058418-29058788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr18:37002715-37002336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr18:39875177-39875553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr18:56159544-56159172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 50
               

               
Conread position:
               
247-636
               

               
Cow position:
               
chr18:17005344-17004951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 184
               

               
Conread position:
               
247-639
               

               
Cow position:
               
chr18:7359828-7359434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 172
               

               
Conread position:
               
247-644
               

               
Cow position:
               
chr18:33157898-33157514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
247-659
               

               
Cow position:
               
chr18:51212266-51211859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 64
               

               
Conread position:
               
248-573
               

               
Cow position:
               
chr18:6157995-6157686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
145, 51
               

               
Conread position:
               
248-604
               

               
Cow position:
               
chr18:21768696-21768360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
233, 104
               

               
Conread position:
               
248-625
               

               
Cow position:
               
chr18:25282472-25282843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 86
               

               
Conread position:
               
248-626
               

               
Cow position:
               
chr18:4539800-4540161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
229, 97
               

               
Conread position:
               
248-626
               

               
Cow position:
               
chr18:28923766-28924121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
328, 11
               

               
Conread position:
               
249-388
               

               
Cow position:
               
chr18:26843017-26843156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-426
               

               
Cow position:
               
chr18:5701329-5701153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
151, 88
               

               
Conread position:
               
249-427
               

               
Cow position:
               
chr18:15689367-15689187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 113
               

               
Conread position:
               
249-455
               

               
Cow position:
               
chr18:35360048-35359845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
249-493
               

               
Cow position:
               
chr18:21706103-21706342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
119, 54
               

               
Conread position:
               
249-500
               

               
Cow position:
               
chr18:51850483-51850731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
156, 74
               

               
Conread position:
               
249-536
               

               
Cow position:
               
chr18:55806554-55806834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
223, 9
               

               
Conread position:
               
249-559
               

               
Cow position:
               
chr18:52584065-52583773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
249-562
               

               
Cow position:
               
chr18:24855763-24856070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
141, 47
               

               
Conread position:
               
249-598
               

               
Cow position:
               
chr18:23360709-23360368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
206, 50
               

               
Conread position:
               
249-607
               

               
Cow position:
               
chr18:32773959-32773609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 37
               

               
Conread position:
               
249-624
               

               
Cow position:
               
chr18:31586294-31586651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 100
               

               
Conread position:
               
249-626
               

               
Cow position:
               
chr18:248734-249092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 110
               

               
Conread position:
               
249-630
               

               
Cow position:
               
chr18:25002809-25003170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
206, 37
               

               
Conread position:
               
249-630
               

               
Cow position:
               
chr18:45961190-45961552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 151
               

               
Conread position:
               
249-630
               

               
Cow position:
               
chr18:50700765-50700372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
148, 28
               

               
Conread position:
               
249-631
               

               
Cow position:
               
chr18:9806502-9806116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
249-631
               

               
Cow position:
               
chr18:29796347-29796719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 137
               

               
Conread position:
               
249-634
               

               
Cow position:
               
chr18:38344887-38344507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 94
               

               
Conread position:
               
249-644
               

               
Cow position:
               
chr18:20127024-20127407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 176
               

               
Conread position:
               
249-644
               

               
Cow position:
               
chr18:23424999-23424621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 50
               

               
Conread position:
               
249-644
               

               
Cow position:
               
chr18:42061156-42060771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
164, 38
               

               
Conread position:
               
250-433
               

               
Cow position:
               
chr18:4673384-4673202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
121, 81
               

               
Conread position:
               
250-493
               

               
Cow position:
               
chr18:47835904-47835662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
156, 64
               

               
Conread position:
               
250-493
               

               
Cow position:
               
chr18:56190882-56191135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
154, 85
               

               
Conread position:
               
250-558
               

               
Cow position:
               
chr18:39434904-39434602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
149, 36
               

               
Conread position:
               
250-568
               

               
Cow position:
               
chr18:43020324-43020621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 88
               

               
Conread position:
               
250-574
               

               
Cow position:
               
chr18:48828695-48829024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
250-596
               

               
Cow position:
               
chr18:22411531-22411876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 125
               

               
Conread position:
               
250-619
               

               
Cow position:
               
chr18:51655962-51656335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
143, 223
               

               
Conread position:
               
250-621
               

               
Cow position:
               
chr18:47525488-47525122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
148, 242
               

               
Conread position:
               
250-630
               

               
Cow position:
               
chr18:51443360-51443722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
212, 9
               

               
Conread position:
               
251-436
               

               
Cow position:
               
chr18:56044632-56044450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
147, 80
               

               
Conread position:
               
251-439
               

               
Cow position:
               
chr18:53642671-53642862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
251-630
               

               
Cow position:
               
chr18:52634991-52635374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
252-630
               

               
Cow position:
               
chr18:11685060-11684697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
120, 198
               

               
Conread position:
               
255-628
               

               
Cow position:
               
chr18:44801814-44802174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
137, 192
               

               
Conread position:
               
255-635
               

               
Cow position:
               
chr18:4666142-4666509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
135, 18
               

               
Conread position:
               
256-524
               

               
Cow position:
               
chr18:21102702-21102967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
216, 74
               

               
Conread position:
               
257-568
               

               
Cow position:
               
chr18:21575059-21574761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
186, 118
               

               
Conread position:
               
258-565
               

               
Cow position:
               
chr18:18592545-18592244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
281, 141
               

               
Conread position:
               
259-470
               

               
Cow position:
               
chr18:55015439-55015235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
259-489
               

               
Cow position:
               
chr18:39022324-39022101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
219, 17
               

               
Conread position:
               
259-630
               

               
Cow position:
               
chr18:33299975-33299605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
119, 236
               

               
Conread position:
               
260-628
               

               
Cow position:
               
chr18:13360126-13359771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 79
               

               
Conread position:
               
260-629
               

               
Cow position:
               
chr18:56166051-56165691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
182, 78
               

               
Conread position:
               
261-626
               

               
Cow position:
               
chr18:23476618-23476959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 168
               

               
Conread position:
               
263-636
               

               
Cow position:
               
chr18:10576178-10575813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 186
               

               
Conread position:
               
264-560
               

               
Cow position:
               
chr18:2863924-2864222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
135, 241
               

               
Conread position:
               
264-601
               

               
Cow position:
               
chr18:4381359-4381030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
264-622
               

               
Cow position:
               
chr18:3166423-3166773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
58, 78
               

               
Conread position:
               
264-624
               

               
Cow position:
               
chr18:47517138-47517495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
89, 185
               

               
Conread position:
               
264-636
               

               
Cow position:
               
chr18:4182122-4182489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 22
               

               
Conread position:
               
264-636
               

               
Cow position:
               
chr18:55000676-55001038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
131, 39
               

               
Conread position:
               
264-640
               

               
Cow position:
               
chr18:29356558-29356930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
264-653
               

               
Cow position:
               
chr18:21176253-21175867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 73
               

               
Conread position:
               
267-631
               

               
Cow position:
               
chr18:23766346-23766710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 237
               

               
Conread position:
               
269-479
               

               
Cow position:
               
chr18:49659822-49660022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
52, 63
               

               
Conread position:
               
270-470
               

               
Cow position:
               
chr18:11907255-11907055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 26
               

               
Conread position:
               
270-493
               

               
Cow position:
               
chr18:16686273-16686501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
270-630
               

               
Cow position:
               
chr18:28768421-28768074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
270-636
               

               
Cow position:
               
chr18:55553027-55552666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
202, 122
               

               
Conread position:
               
273-470
               

               
Cow position:
               
chr18:19688081-19687880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
273-478
               

               
Cow position:
               
chr18:30405603-30405811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
273-630
               

               
Cow position:
               
chr18:3115510-3115167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
207, 117
               

               
Conread position:
               
273-630
               

               
Cow position:
               
chr18:6275868-6275523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
266, 117
               

               
Conread position:
               
280-490
               

               
Cow position:
               
chr18:10117550-10117343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
116, 14
               

               
Conread position:
               
280-631
               

               
Cow position:
               
chr18:13507690-13508023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
280-631
               

               
Cow position:
               
chr18:50637423-50637757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
194, 18
               

               
Conread position:
               
281-626
               

               
Cow position:
               
chr18:47183244-47183574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
193, 96
               

               
Conread position:
               
281-628
               

               
Cow position:
               
chr18:15025721-15025388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
282-645
               

               
Cow position:
               
chr18:25206140-25206500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
108, 85
               

               
Conread position:
               
286-478
               

               
Cow position:
               
chr18:34813691-34813501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
170, 99
               

               
Conread position:
               
286-626
               

               
Cow position:
               
chr18:14815304-14815624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
113, 44
               

               
Conread position:
               
287-616
               

               
Cow position:
               
chr18:54574276-54574591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
287-630
               

               
Cow position:
               
chr18:29958121-29958439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
190, 94
               

               
Conread position:
               
287-636
               

               
Cow position:
               
chr18:15880801-15881156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
86, 223
               

               
Conread position:
               
288-624
               

               
Cow position:
               
chr18:35537194-35537516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
288-630
               

               
Cow position:
               
chr18:5487284-5486958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
189, 42
               

               
Conread position:
               
296-626
               

               
Cow position:
               
chr18:51500039-51500371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 122
               

               
Conread position:
               
297-605
               

               
Cow position:
               
chr18:46436732-46437020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
298-564
               

               
Cow position:
               
chr18:34021421-34021163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 121
               

               
Conread position:
               
298-630
               

               
Cow position:
               
chr18:26535475-26535809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
299-624
               

               
Cow position:
               
chr18:49200664-49200353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
179, 64
               

               
Conread position:
               
299-630
               

               
Cow position:
               
chr18:4748851-4749176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
91, 112
               

               
Conread position:
               
299-630
               

               
Cow position:
               
chr18:39001776-39002088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
177, 30
               

               
Conread position:
               
299-638
               

               
Cow position:
               
chr18:13172501-13172824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
171, 78
               

               
Conread position:
               
299-644
               

               
Cow position:
               
chr18:4516061-4515720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
95, 130
               

               
Conread position:
               
300-630
               

               
Cow position:
               
chr18:18640412-18640077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
300-631
               

               
Cow position:
               
chr18:7951145-7950819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 125
               

               
Conread position:
               
303-493
               

               
Cow position:
               
chr18:4952183-4952373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
304-490
               

               
Cow position:
               
chr18:47812496-47812306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
96, 32
               

               
Conread position:
               
304-585
               

               
Cow position:
               
chr18:26355002-26355281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 101
               

               
Conread position:
               
304-636
               

               
Cow position:
               
chr18:329247-329572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
98, 157
               

               
Conread position:
               
304-636
               

               
Cow position:
               
chr18:43065556-43065210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
83, 121
               

               
Conread position:
               
306-640
               

               
Cow position:
               
chr18:4368753-4369083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
311-626
               

               
Cow position:
               
chr18:36513000-36512686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 101
               

               
Conread position:
               
311-630
               

               
Cow position:
               
chr18:8104920-8105236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 187
               

               
Conread position:
               
311-630
               

               
Cow position:
               
chr18:33852277-33851961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
170, 104
               

               
Conread position:
               
311-634
               

               
Cow position:
               
chr18:20864999-20864686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
204, 79
               

               
Conread position:
               
311-637
               

               
Cow position:
               
chr18:14048728-14048413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
85, 131
               

               
Conread position:
               
314-567
               

               
Cow position:
               
chr18:12809871-12809629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
161, 78
               

               
Conread position:
               
316-630
               

               
Cow position:
               
chr18:23652606-23652906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
319-568
               

               
Cow position:
               
chr18:20481872-20482105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
161, 6
               

               
Conread position:
               
320-568
               

               
Cow position:
               
chr18:219346-219101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
320-624
               

               
Cow position:
               
chr18:36098222-36097914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 187
               

               
Conread position:
               
320-636
               

               
Cow position:
               
chr18:7947400-7947076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 162
               

               
Conread position:
               
321-626
               

               
Cow position:
               
chr18:33407626-33407322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
80, 177
               

               
Conread position:
               
321-630
               

               
Cow position:
               
chr18:56361594-56361895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
60, 83
               

               
Conread position:
               
321-644
               

               
Cow position:
               
chr18:36478212-36477891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
322-603
               

               
Cow position:
               
chr18:2480664-2480376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 68
               

               
Conread position:
               
323-628
               

               
Cow position:
               
chr18:601169-601461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 103
               

               
Conread position:
               
324-626
               

               
Cow position:
               
chr18:7487256-7486963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
153, 60
               

               
Conread position:
               
332-436
               

               
Cow position:
               
chr18:14779307-14779413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
332-493
               

               
Cow position:
               
chr18:37363797-37363637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
144, 66
               

               
Conread position:
               
332-568
               

               
Cow position:
               
chr18:33008061-33007825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
58, 167
               

               
Conread position:
               
332-607
               

               
Cow position:
               
chr18:48453686-48453423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
144, 102
               

               
Conread position:
               
332-626
               

               
Cow position:
               
chr18:267817-268100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 104
               

               
Conread position:
               
332-626
               

               
Cow position:
               
chr18:16417708-16417985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
332-626
               

               
Cow position:
               
chr18:27103322-27103031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 80
               

               
Conread position:
               
332-629
               

               
Cow position:
               
chr18:44548914-44549199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 171
               

               
Conread position:
               
332-630
               

               
Cow position:
               
chr18:32121069-32121353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
159, 64
               

               
Conread position:
               
332-632
               

               
Cow position:
               
chr18:55397308-55397019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
64, 91
               

               
Conread position:
               
332-636
               

               
Cow position:
               
chr18:35636348-35636649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
68, 141
               

               
Conread position:
               
333-536
               

               
Cow position:
               
chr18:2774604-2774811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
333-556
               

               
Cow position:
               
chr18:54056547-54056339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
143, 57
               

               
Conread position:
               
333-641
               

               
Cow position:
               
chr18:4648750-4649039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
335-628
               

               
Cow position:
               
chr18:21205359-21205074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 156
               

               
Conread position:
               
335-641
               

               
Cow position:
               
chr18:26937716-26937427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
338-468
               

               
Cow position:
               
chr18:39861923-39862053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
338-493
               

               
Cow position:
               
chr18:10861437-10861602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
338-626
               

               
Cow position:
               
chr18:5783116-5783394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
338-637
               

               
Cow position:
               
chr18:21528395-21528105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
165, 66
               

               
Conread position:
               
339-493
               

               
Cow position:
               
chr18:15340453-15340611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
340-493
               

               
Cow position:
               
chr18:4602023-4602174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
340-568
               

               
Cow position:
               
chr18:42966854-42966623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
340-626
               

               
Cow position:
               
chr18:54658302-54658012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 159
               

               
Conread position:
               
340-638
               

               
Cow position:
               
chr18:33606621-33606335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
138, 163
               

               
Conread position:
               
341-659
               

               
Cow position:
               
chr18:52632418-52632728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
46, 88
               

               
Conread position:
               
342-631
               

               
Cow position:
               
chr18:17669818-17670097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
344-631
               

               
Cow position:
               
chr18:26586673-26586959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
130, 16
               

               
Conread position:
               
344-644
               

               
Cow position:
               
chr18:11680710-11680413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 156
               

               
Conread position:
               
346-555
               

               
Cow position:
               
chr18:14085448-14085240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 117
               

               
Conread position:
               
346-630
               

               
Cow position:
               
chr18:6290767-6290491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
134, 46
               

               
Conread position:
               
346-630
               

               
Cow position:
               
chr18:38075165-38075446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
54, 48
               

               
Conread position:
               
346-633
               

               
Cow position:
               
chr18:56150659-56150952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
50, 157
               

               
Conread position:
               
347-483
               

               
Cow position:
               
chr18:28190036-28190172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
117, 124
               

               
Conread position:
               
347-599
               

               
Cow position:
               
chr18:35582114-35582364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 153
               

               
Conread position:
               
347-624
               

               
Cow position:
               
chr18:19831293-19831010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 199
               

               
Conread position:
               
347-624
               

               
Cow position:
               
chr18:45573091-45572822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
347-630
               

               
Cow position:
               
chr18:49161453-49161749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
347-636
               

               
Cow position:
               
chr18:3098338-3098611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
127, 42
               

               
Conread position:
               
347-637
               

               
Cow position:
               
chr18:19977002-19977278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
192, 55
               

               
Conread position:
               
349-636
               

               
Cow position:
               
chr18:13631971-13632250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr18:35827432-35827704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
187, 55
               

               
Conread position:
               
350-641
               

               
Cow position:
               
chr18:11166961-11166675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
48, 148
               

               
Conread position:
               
350-643
               

               
Cow position:
               
chr18:52658392-52658113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
351-650
               

               
Cow position:
               
chr18:4316291-4315994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
49, 68
               

               
Conread position:
               
353-566
               

               
Cow position:
               
chr18:28822992-28823198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
123, 41
               

               
Conread position:
               
353-626
               

               
Cow position:
               
chr18:31724898-31725173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
7, 139
               

               
Conread position:
               
354-605
               

               
Cow position:
               
chr18:33793680-33793440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 36
               

               
Conread position:
               
354-605
               

               
Cow position:
               
chr18:49665175-49665420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 43
               

               
Conread position:
               
354-630
               

               
Cow position:
               
chr18:43564202-43563935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
356-609
               

               
Cow position:
               
chr18:41271060-41270818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
356-626
               

               
Cow position:
               
chr18:16847669-16847409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 144
               

               
Conread position:
               
356-630
               

               
Cow position:
               
chr18:18957826-18958084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
356-631
               

               
Cow position:
               
chr18:47314306-47314588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
17, 150
               

               
Conread position:
               
356-644
               

               
Cow position:
               
chr18:47868439-47868148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 146
               

               
Conread position:
               
357-630
               

               
Cow position:
               
chr18:35076366-35076094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 146
               

               
Conread position:
               
359-559
               

               
Cow position:
               
chr18:53962663-53962461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
360-490
               

               
Cow position:
               
chr18:47124673-47124545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 77
               

               
Conread position:
               
360-648
               

               
Cow position:
               
chr18:30673671-30673952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
112, 46
               

               
Conread position:
               
361-630
               

               
Cow position:
               
chr18:52382673-52382405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 125
               

               
Conread position:
               
366-631
               

               
Cow position:
               
chr18:52864343-52864610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 140
               

               
Conread position:
               
372-624
               

               
Cow position:
               
chr18:19159014-19159251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
380-630
               

               
Cow position:
               
chr18:14480419-14480180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
384-626
               

               
Cow position:
               
chr18:48036722-48036492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
385-644
               

               
Cow position:
               
chr18:23807928-23808180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 112
               

               
Conread position:
               
393-626
               

               
Cow position:
               
chr18:51537725-51537951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
84, 51
               

               
Conread position:
               
393-629
               

               
Cow position:
               
chr18:19487050-19486821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
393-631
               

               
Cow position:
               
chr18:56167982-56168213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 118
               

               
Conread position:
               
394-630
               

               
Cow position:
               
chr18:24342553-24342332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
396-624
               

               
Cow position:
               
chr18:31562461-31562677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
396-636
               

               
Cow position:
               
chr18:22065419-22065660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
59, 204
               

               
Conread position:
               
396-636
               

               
Cow position:
               
chr18:54974061-54974289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
143, 16
               

               
Conread position:
               
396-658
               

               
Cow position:
               
chr18:11367826-11368086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
59, 113
               

               
Conread position:
               
397-630
               

               
Cow position:
               
chr18:13293444-13293217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
398-605
               

               
Cow position:
               
chr18:19761627-19761430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
398-624
               

               
Cow position:
               
chr18:26286842-26286626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
398-629
               

               
Cow position:
               
chr18:49543406-49543186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
398-634
               

               
Cow position:
               
chr18:36445371-36445135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
82, 96
               

               
Conread position:
               
398-638
               

               
Cow position:
               
chr18:35058271-35058040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
76, 91
               

               
Conread position:
               
398-643
               

               
Cow position:
               
chr18:47930933-47931166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
82, 102
               

               
Conread position:
               
403-626
               

               
Cow position:
               
chr18:9818765-9818548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
80, 98
               

               
Conread position:
               
407-644
               

               
Cow position:
               
chr18:5647171-5646943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 91
               

               
Conread position:
               
409-632
               

               
Cow position:
               
chr18:27388474-27388253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 89
               

               
Conread position:
               
409-636
               

               
Cow position:
               
chr18:43823029-43823252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 81
               

               
Conread position:
               
411-626
               

               
Cow position:
               
chr18:238424-238633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 94
               

               
Conread position:
               
420-626
               

               
Cow position:
               
chr18:55782508-55782715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
420-630
               

               
Cow position:
               
chr18:48407701-48407496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
425-630
               

               
Cow position:
               
chr18:30248225-30248419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
430-630
               

               
Cow position:
               
chr18:81656-81463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
440-626
               

               
Cow position:
               
chr18:45395896-45395712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
32, 62
               
Show alignments to all cow chromosomes.