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Cow genome map

           
Conread name:
           
Ova1-OVRM10096F06
        

               
Conread position:
               
128-604
               

               
Cow position:
               
chr23:13360044-13359586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
257, 41
               

               
Conread position:
               
128-630
               

               
Cow position:
               
chr23:4810978-4810491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
128-653
               

               
Cow position:
               
chr23:4968293-4968801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
129-479
               

               
Cow position:
               
chr23:5436403-5436755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
129-630
               

               
Cow position:
               
chr23:31601212-31601717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
103, 166
               

               
Conread position:
               
131-625
               

               
Cow position:
               
chr23:15286917-15287388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 15
               

               
Conread position:
               
134-448
               

               
Cow position:
               
chr23:16780326-16780633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
136-630
               

               
Cow position:
               
chr23:1536556-1536069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
26, 199
               

               
Conread position:
               
140-626
               

               
Cow position:
               
chr23:6244377-6244842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 30
               

               
Conread position:
               
146-630
               

               
Cow position:
               
chr23:14838540-14838994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 51
               

               
Conread position:
               
147-486
               

               
Cow position:
               
chr23:40790189-40789855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
153-630
               

               
Cow position:
               
chr23:10853263-10852793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
158-378
               

               
Cow position:
               
chr23:21423975-21423755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
158-487
               

               
Cow position:
               
chr23:19774958-19774650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
158-571
               

               
Cow position:
               
chr23:29786134-29786553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 255
               

               
Conread position:
               
158-631
               

               
Cow position:
               
chr23:29626635-29626154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
74, 357
               

               
Conread position:
               
159-351
               

               
Cow position:
               
chr23:26698274-26698457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
130, 72
               

               
Conread position:
               
159-451
               

               
Cow position:
               
chr23:385101-385399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
159-533
               

               
Cow position:
               
chr23:12091154-12091524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
133, 10
               

               
Conread position:
               
159-604
               

               
Cow position:
               
chr23:22530229-22530651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
220, 69
               

               
Conread position:
               
159-625
               

               
Cow position:
               
chr23:2281980-2282428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 44
               

               
Conread position:
               
160-362
               

               
Cow position:
               
chr23:38854381-38854586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
160-397
               

               
Cow position:
               
chr23:30311723-30311963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 127
               

               
Conread position:
               
160-489
               

               
Cow position:
               
chr23:33152988-33153315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
160-568
               

               
Cow position:
               
chr23:35177509-35177121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 74
               

               
Conread position:
               
160-605
               

               
Cow position:
               
chr23:15743297-15742865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
161-358
               

               
Cow position:
               
chr23:17012536-17012731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
161-370
               

               
Cow position:
               
chr23:12405614-12405824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
161-371
               

               
Cow position:
               
chr23:40122757-40122556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
161-382
               

               
Cow position:
               
chr23:5799265-5799477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
161-409
               

               
Cow position:
               
chr23:360476-360735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
161-423
               

               
Cow position:
               
chr23:35930154-35929898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
161-431
               

               
Cow position:
               
chr23:18823190-18822925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
237, 69
               

               
Conread position:
               
161-478
               

               
Cow position:
               
chr23:3522949-3522639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
161-479
               

               
Cow position:
               
chr23:4327480-4327804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 238
               

               
Conread position:
               
161-491
               

               
Cow position:
               
chr23:1759454-1759140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 214
               

               
Conread position:
               
161-494
               

               
Cow position:
               
chr23:22414103-22414424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
161-523
               

               
Cow position:
               
chr23:23409921-23409581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
14, 34
               

               
Conread position:
               
161-563
               

               
Cow position:
               
chr23:17484650-17485062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
16, 71
               

               
Conread position:
               
161-568
               

               
Cow position:
               
chr23:38974040-38973649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
229, 11
               

               
Conread position:
               
161-601
               

               
Cow position:
               
chr23:21660142-21659707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
161-605
               

               
Cow position:
               
chr23:5603093-5603505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 18
               

               
Conread position:
               
161-606
               

               
Cow position:
               
chr23:10416222-10416658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 70
               

               
Conread position:
               
161-606
               

               
Cow position:
               
chr23:24704489-24704040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 36
               

               
Conread position:
               
161-615
               

               
Cow position:
               
chr23:1884967-1885420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 238
               

               
Conread position:
               
161-624
               

               
Cow position:
               
chr23:39753307-39752861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 18
               

               
Conread position:
               
161-626
               

               
Cow position:
               
chr23:534432-533975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 310
               

               
Conread position:
               
161-626
               

               
Cow position:
               
chr23:7845494-7845032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 49
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr23:343971-344437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 165
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr23:13555227-13555687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr23:37066062-37065578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 353
               

               
Conread position:
               
161-631
               

               
Cow position:
               
chr23:4726998-4726540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
71, 118
               

               
Conread position:
               
161-631
               

               
Cow position:
               
chr23:33601327-33601780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
161-644
               

               
Cow position:
               
chr23:16880964-16881430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
241, 70
               

               
Conread position:
               
161-646
               

               
Cow position:
               
chr23:26949397-26948907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 83
               

               
Conread position:
               
162-364
               

               
Cow position:
               
chr23:1954479-1954281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
162-415
               

               
Cow position:
               
chr23:28529746-28529998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
162-467
               

               
Cow position:
               
chr23:769336-769652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
162-630
               

               
Cow position:
               
chr23:20388460-20388895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
162-636
               

               
Cow position:
               
chr23:9734625-9734154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 182
               

               
Conread position:
               
163-467
               

               
Cow position:
               
chr23:1222037-1222342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
231, 45
               

               
Conread position:
               
163-470
               

               
Cow position:
               
chr23:19173152-19173458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 175
               

               
Conread position:
               
163-479
               

               
Cow position:
               
chr23:307662-307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 286
               

               
Conread position:
               
163-479
               

               
Cow position:
               
chr23:3244711-3245030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
69, 136
               

               
Conread position:
               
163-496
               

               
Cow position:
               
chr23:39813706-39813372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
86, 164
               

               
Conread position:
               
163-497
               

               
Cow position:
               
chr23:32479813-32480170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
163-498
               

               
Cow position:
               
chr23:38234-37904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
69, 256
               

               
Conread position:
               
163-577
               

               
Cow position:
               
chr23:30585445-30585868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 328
               

               
Conread position:
               
163-621
               

               
Cow position:
               
chr23:9599693-9599252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
163-630
               

               
Cow position:
               
chr23:187383-186912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 337
               

               
Conread position:
               
163-637
               

               
Cow position:
               
chr23:18802063-18802539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
73, 341
               

               
Conread position:
               
163-644
               

               
Cow position:
               
chr23:26794709-26795177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
69, 136
               

               
Conread position:
               
164-494
               

               
Cow position:
               
chr23:11081461-11081127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 154
               

               
Conread position:
               
164-565
               

               
Cow position:
               
chr23:25675494-25675887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
164-619
               

               
Cow position:
               
chr23:41348425-41348896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
220, 66
               

               
Conread position:
               
166-405
               

               
Cow position:
               
chr23:26283921-26283684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
233, 38
               

               
Conread position:
               
166-490
               

               
Cow position:
               
chr23:5436799-5437125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 117
               

               
Conread position:
               
166-630
               

               
Cow position:
               
chr23:22396254-22396700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 66
               

               
Conread position:
               
166-630
               

               
Cow position:
               
chr23:22804923-22804463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 18
               

               
Conread position:
               
167-442
               

               
Cow position:
               
chr23:11750953-11751208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
230, 45
               

               
Conread position:
               
168-532
               

               
Cow position:
               
chr23:1636467-1636114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
64, 143
               

               
Conread position:
               
169-354
               

               
Cow position:
               
chr23:17039341-17039523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
169-370
               

               
Cow position:
               
chr23:1194297-1194496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
169-437
               

               
Cow position:
               
chr23:18748878-18749138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
221, 61
               

               
Conread position:
               
169-441
               

               
Cow position:
               
chr23:5881323-5881595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
221, 62
               

               
Conread position:
               
169-469
               

               
Cow position:
               
chr23:24685438-24685147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
169-477
               

               
Cow position:
               
chr23:22573708-22574029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 243
               

               
Conread position:
               
169-479
               

               
Cow position:
               
chr23:39573067-39573371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
169-484
               

               
Cow position:
               
chr23:35239549-35239228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
169-489
               

               
Cow position:
               
chr23:5795674-5795352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
226, 175
               

               
Conread position:
               
169-490
               

               
Cow position:
               
chr23:3890374-3890693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
169-490
               

               
Cow position:
               
chr23:36172730-36172395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr23:5732735-5732420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
203, 24
               

               
Conread position:
               
169-511
               

               
Cow position:
               
chr23:1656092-1655741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
169-553
               

               
Cow position:
               
chr23:34356839-34356451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
169-561
               

               
Cow position:
               
chr23:33570329-33569945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
100, 60
               

               
Conread position:
               
169-567
               

               
Cow position:
               
chr23:5426635-5426231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
62, 348
               

               
Conread position:
               
169-568
               

               
Cow position:
               
chr23:1942932-1942524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
169-574
               

               
Cow position:
               
chr23:24929871-24930276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
85, 273
               

               
Conread position:
               
169-585
               

               
Cow position:
               
chr23:18901868-18902265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
308, 61
               

               
Conread position:
               
169-594
               

               
Cow position:
               
chr23:1290504-1290071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 282
               

               
Conread position:
               
169-594
               

               
Cow position:
               
chr23:20557644-20558082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
63, 338
               

               
Conread position:
               
169-604
               

               
Cow position:
               
chr23:4498934-4499369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
169-624
               

               
Cow position:
               
chr23:20744384-20744842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
63, 281
               

               
Conread position:
               
169-624
               

               
Cow position:
               
chr23:40778461-40778010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
169-626
               

               
Cow position:
               
chr23:20194732-20195173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 48
               

               
Conread position:
               
169-628
               

               
Cow position:
               
chr23:5617773-5617322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
63, 222
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr23:1883591-1883134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 85
               

               
Conread position:
               
169-636
               

               
Cow position:
               
chr23:3247787-3247323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 107
               

               
Conread position:
               
169-644
               

               
Cow position:
               
chr23:3967356-3967820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
169-646
               

               
Cow position:
               
chr23:29243130-29242669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 62
               

               
Conread position:
               
169-659
               

               
Cow position:
               
chr23:2501659-2502137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 61
               

               
Conread position:
               
170-472
               

               
Cow position:
               
chr23:11212701-11212398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
201, 60
               

               
Conread position:
               
170-492
               

               
Cow position:
               
chr23:9226471-9226145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
222, 54
               

               
Conread position:
               
170-493
               

               
Cow position:
               
chr23:12363422-12363748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
218, 0
               

               
Conread position:
               
170-622
               

               
Cow position:
               
chr23:38454966-38455436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 352
               

               
Conread position:
               
170-631
               

               
Cow position:
               
chr23:32106065-32105614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
130, 62
               

               
Conread position:
               
170-638
               

               
Cow position:
               
chr23:25864497-25864949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 104
               

               
Conread position:
               
171-601
               

               
Cow position:
               
chr23:41472821-41472379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
60, 119
               

               
Conread position:
               
171-626
               

               
Cow position:
               
chr23:1337111-1337560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 106
               

               
Conread position:
               
171-646
               

               
Cow position:
               
chr23:29345581-29346034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 60
               

               
Conread position:
               
173-608
               

               
Cow position:
               
chr23:6224162-6223763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
176-478
               

               
Cow position:
               
chr23:40348455-40348755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
176-625
               

               
Cow position:
               
chr23:16582716-16583163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 343
               

               
Conread position:
               
176-630
               

               
Cow position:
               
chr23:11129427-11128975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
177-468
               

               
Cow position:
               
chr23:15280305-15280602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
177-497
               

               
Cow position:
               
chr23:18415867-18416182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
178-626
               

               
Cow position:
               
chr23:26632989-26632545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 23
               

               
Conread position:
               
181-629
               

               
Cow position:
               
chr23:21452546-21452991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
183-450
               

               
Cow position:
               
chr23:17486643-17486912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
194-659
               

               
Cow position:
               
chr23:21446286-21445834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 36
               

               
Conread position:
               
200-493
               

               
Cow position:
               
chr23:39083620-39083323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
206-641
               

               
Cow position:
               
chr23:39775886-39775461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
217-487
               

               
Cow position:
               
chr23:5540295-5540038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
219-631
               

               
Cow position:
               
chr23:26319538-26319157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
220-407
               

               
Cow position:
               
chr23:29480036-29479849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 115
               

               
Conread position:
               
222-659
               

               
Cow position:
               
chr23:6592564-6592978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
229-605
               

               
Cow position:
               
chr23:5707130-5706766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
176, 220
               

               
Conread position:
               
234-472
               

               
Cow position:
               
chr23:1876841-1876603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
139, 10
               

               
Conread position:
               
235-497
               

               
Cow position:
               
chr23:30951086-30950826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
50, 161
               

               
Conread position:
               
237-631
               

               
Cow position:
               
chr23:29458971-29459348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 18
               

               
Conread position:
               
241-602
               

               
Cow position:
               
chr23:40891486-40891130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 14
               

               
Conread position:
               
244-449
               

               
Cow position:
               
chr23:21309291-21309497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
155, 33
               

               
Conread position:
               
244-631
               

               
Cow position:
               
chr23:5162551-5162168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 86
               

               
Conread position:
               
244-637
               

               
Cow position:
               
chr23:40781451-40781062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 89
               

               
Conread position:
               
245-470
               

               
Cow position:
               
chr23:6035551-6035336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
147, 44
               

               
Conread position:
               
245-545
               

               
Cow position:
               
chr23:1767951-1767654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 248
               

               
Conread position:
               
245-626
               

               
Cow position:
               
chr23:9268700-9268335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
232, 84
               

               
Conread position:
               
246-389
               

               
Cow position:
               
chr23:1936523-1936666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
246-483
               

               
Cow position:
               
chr23:1701290-1701051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
150, 10
               

               
Conread position:
               
246-568
               

               
Cow position:
               
chr23:18296926-18296610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
157, 112
               

               
Conread position:
               
246-574
               

               
Cow position:
               
chr23:40648612-40648931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
246-634
               

               
Cow position:
               
chr23:38208845-38208450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 57
               

               
Conread position:
               
247-420
               

               
Cow position:
               
chr23:3244350-3244522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
247-463
               

               
Cow position:
               
chr23:3191006-3191225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
247-479
               

               
Cow position:
               
chr23:306641-306410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
152, 198
               

               
Conread position:
               
247-487
               

               
Cow position:
               
chr23:4336185-4335954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
133, 82
               

               
Conread position:
               
247-490
               

               
Cow position:
               
chr23:21502512-21502764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 205
               

               
Conread position:
               
247-535
               

               
Cow position:
               
chr23:7574506-7574799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 38
               

               
Conread position:
               
247-550
               

               
Cow position:
               
chr23:3282004-3282294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
230, 9
               

               
Conread position:
               
247-555
               

               
Cow position:
               
chr23:4104514-4104221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
229, 83
               

               
Conread position:
               
247-568
               

               
Cow position:
               
chr23:1742472-1742160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
153, 71
               

               
Conread position:
               
247-586
               

               
Cow position:
               
chr23:5723653-5723328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
154, 30
               

               
Conread position:
               
247-603
               

               
Cow position:
               
chr23:1397920-1398270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 128
               

               
Conread position:
               
247-604
               

               
Cow position:
               
chr23:13599459-13599108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 90
               

               
Conread position:
               
247-616
               

               
Cow position:
               
chr23:16699923-16700284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 144
               

               
Conread position:
               
247-624
               

               
Cow position:
               
chr23:6994864-6995222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
142, 211
               

               
Conread position:
               
247-626
               

               
Cow position:
               
chr23:1923719-1924088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr23:1254806-1254418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr23:18697907-18698285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
247-644
               

               
Cow position:
               
chr23:29034433-29034043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
135, 82
               

               
Conread position:
               
247-659
               

               
Cow position:
               
chr23:1720864-1721275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
248-438
               

               
Cow position:
               
chr23:35247485-35247292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
248-636
               

               
Cow position:
               
chr23:21336366-21336754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 257
               

               
Conread position:
               
249-458
               

               
Cow position:
               
chr23:29069324-29069536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
249-467
               

               
Cow position:
               
chr23:18404120-18403904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 7
               

               
Conread position:
               
249-493
               

               
Cow position:
               
chr23:26051155-26050906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
249-554
               

               
Cow position:
               
chr23:40651356-40651645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
249-560
               

               
Cow position:
               
chr23:40844766-40844460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
249-574
               

               
Cow position:
               
chr23:21765036-21764714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
249-602
               

               
Cow position:
               
chr23:30308024-30307677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 50
               

               
Conread position:
               
249-612
               

               
Cow position:
               
chr23:27544945-27544591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 146
               

               
Conread position:
               
249-616
               

               
Cow position:
               
chr23:40862463-40862094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
249-624
               

               
Cow position:
               
chr23:17000821-17000448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
149, 24
               

               
Conread position:
               
249-625
               

               
Cow position:
               
chr23:20171697-20171324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 127
               

               
Conread position:
               
249-626
               

               
Cow position:
               
chr23:19001953-19002323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 19
               

               
Conread position:
               
249-630
               

               
Cow position:
               
chr23:8930021-8930369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
352, 50
               

               
Conread position:
               
249-631
               

               
Cow position:
               
chr23:11045603-11045224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 76
               

               
Conread position:
               
249-631
               

               
Cow position:
               
chr23:11473388-11473769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
249-631
               

               
Cow position:
               
chr23:24867426-24867042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
146, 251
               

               
Conread position:
               
249-646
               

               
Cow position:
               
chr23:9652370-9652742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 28
               

               
Conread position:
               
249-646
               

               
Cow position:
               
chr23:37223957-37224341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
130, 50
               

               
Conread position:
               
250-433
               

               
Cow position:
               
chr23:35368931-35369114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
250-464
               

               
Cow position:
               
chr23:20002370-20002155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
136, 80
               

               
Conread position:
               
250-484
               

               
Cow position:
               
chr23:39780870-39780637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
250-490
               

               
Cow position:
               
chr23:4966934-4966693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
149, 79
               

               
Conread position:
               
250-499
               

               
Cow position:
               
chr23:28944953-28945200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
224, 142
               

               
Conread position:
               
250-624
               

               
Cow position:
               
chr23:20434948-20435302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
112, 141
               

               
Conread position:
               
250-626
               

               
Cow position:
               
chr23:4528763-4529147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 24
               

               
Conread position:
               
250-630
               

               
Cow position:
               
chr23:33711875-33711513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
222, 23
               

               
Conread position:
               
250-631
               

               
Cow position:
               
chr23:10553893-10554271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 152
               

               
Conread position:
               
250-638
               

               
Cow position:
               
chr23:14739564-14739183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 154
               

               
Conread position:
               
250-646
               

               
Cow position:
               
chr23:29272230-29271842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
150, 54
               

               
Conread position:
               
251-626
               

               
Cow position:
               
chr23:7596239-7596586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
221, 69
               

               
Conread position:
               
251-630
               

               
Cow position:
               
chr23:14164280-14164659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 253
               

               
Conread position:
               
251-630
               

               
Cow position:
               
chr23:18402175-18402544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 140
               

               
Conread position:
               
251-630
               

               
Cow position:
               
chr23:34314842-34315225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
149, 18
               

               
Conread position:
               
252-630
               

               
Cow position:
               
chr23:40525870-40526227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
287, 51
               

               
Conread position:
               
255-405
               

               
Cow position:
               
chr23:30655703-30655852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
137, 75
               

               
Conread position:
               
255-636
               

               
Cow position:
               
chr23:30662528-30662889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
284, 112
               

               
Conread position:
               
256-619
               

               
Cow position:
               
chr23:15872583-15872949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 120
               

               
Conread position:
               
256-626
               

               
Cow position:
               
chr23:19636152-19636518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
257-493
               

               
Cow position:
               
chr23:4329567-4329811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
139, 25
               

               
Conread position:
               
259-565
               

               
Cow position:
               
chr23:22399512-22399207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
114, 66
               

               
Conread position:
               
259-626
               

               
Cow position:
               
chr23:11845382-11845033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
260-626
               

               
Cow position:
               
chr23:3262392-3262754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 74
               

               
Conread position:
               
260-630
               

               
Cow position:
               
chr23:15709966-15710336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
6, 18
               

               
Conread position:
               
263-606
               

               
Cow position:
               
chr23:12050459-12050130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
217, 133
               

               
Conread position:
               
264-471
               

               
Cow position:
               
chr23:4795271-4795066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
264-488
               

               
Cow position:
               
chr23:17404940-17404714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
131, 10
               

               
Conread position:
               
264-489
               

               
Cow position:
               
chr23:34348417-34348200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
265-637
               

               
Cow position:
               
chr23:41589822-41590175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
267-630
               

               
Cow position:
               
chr23:4562984-4562622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 235
               

               
Conread position:
               
269-606
               

               
Cow position:
               
chr23:25378743-25378421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
205, 61
               

               
Conread position:
               
271-555
               

               
Cow position:
               
chr23:27290685-27290966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
10, 115
               

               
Conread position:
               
272-477
               

               
Cow position:
               
chr23:349630-349837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 32
               

               
Conread position:
               
272-493
               

               
Cow position:
               
chr23:24984076-24984300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
200, 51
               

               
Conread position:
               
272-625
               

               
Cow position:
               
chr23:32309779-32309427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 149
               

               
Conread position:
               
272-626
               

               
Cow position:
               
chr23:25562031-25562381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
273-568
               

               
Cow position:
               
chr23:16631362-16631067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
117, 191
               

               
Conread position:
               
273-568
               

               
Cow position:
               
chr23:30999657-30999378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
273-618
               

               
Cow position:
               
chr23:26848807-26849148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
117, 178
               

               
Conread position:
               
273-630
               

               
Cow position:
               
chr23:3727292-3727660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 53
               

               
Conread position:
               
273-630
               

               
Cow position:
               
chr23:18322334-18322678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 56
               

               
Conread position:
               
273-634
               

               
Cow position:
               
chr23:1605321-1604959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
123, 175
               

               
Conread position:
               
273-639
               

               
Cow position:
               
chr23:10085093-10085449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
205, 117
               

               
Conread position:
               
273-650
               

               
Cow position:
               
chr23:34416654-34416295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
149, 122
               

               
Conread position:
               
280-431
               

               
Cow position:
               
chr23:1499403-1499554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
280-490
               

               
Cow position:
               
chr23:12334295-12334080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
280-565
               

               
Cow position:
               
chr23:19370989-19371265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
196, 121
               

               
Conread position:
               
280-594
               

               
Cow position:
               
chr23:11994806-11994502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
196, 14
               

               
Conread position:
               
280-623
               

               
Cow position:
               
chr23:33940072-33940408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 138
               

               
Conread position:
               
280-633
               

               
Cow position:
               
chr23:13511811-13511471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
280-635
               

               
Cow position:
               
chr23:10014615-10014281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
196, 74
               

               
Conread position:
               
280-636
               

               
Cow position:
               
chr23:36309506-36309162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
114, 80
               

               
Conread position:
               
281-490
               

               
Cow position:
               
chr23:7361192-7360990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
281-636
               

               
Cow position:
               
chr23:1700976-1700654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
259, 47
               

               
Conread position:
               
281-647
               

               
Cow position:
               
chr23:1647701-1647355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
282-607
               

               
Cow position:
               
chr23:36075728-36076057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
282-608
               

               
Cow position:
               
chr23:33717458-33717781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 66
               

               
Conread position:
               
283-618
               

               
Cow position:
               
chr23:20996542-20996221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
122, 61
               

               
Conread position:
               
284-548
               

               
Cow position:
               
chr23:5516051-5515790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 63
               

               
Conread position:
               
285-470
               

               
Cow position:
               
chr23:39275972-39275784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
105, 140
               

               
Conread position:
               
285-659
               

               
Cow position:
               
chr23:39806950-39806587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
114, 44
               

               
Conread position:
               
286-508
               

               
Cow position:
               
chr23:35938425-35938196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 173
               

               
Conread position:
               
286-626
               

               
Cow position:
               
chr23:27563621-27563964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
68, 193
               

               
Conread position:
               
286-637
               

               
Cow position:
               
chr23:2799660-2799302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
104, 148
               

               
Conread position:
               
287-626
               

               
Cow position:
               
chr23:10414946-10415281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
287-630
               

               
Cow position:
               
chr23:25358803-25358472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
288-621
               

               
Cow position:
               
chr23:2417530-2417206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
288-630
               

               
Cow position:
               
chr23:16563916-16563583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
296-526
               

               
Cow position:
               
chr23:1921157-1921385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
176, 202
               

               
Conread position:
               
296-605
               

               
Cow position:
               
chr23:417217-416926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
243, 135
               

               
Conread position:
               
298-607
               

               
Cow position:
               
chr23:11069282-11068985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
299-603
               

               
Cow position:
               
chr23:29521539-29521237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 198
               

               
Conread position:
               
299-630
               

               
Cow position:
               
chr23:4608314-4608641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
299-630
               

               
Cow position:
               
chr23:5870126-5870442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
178, 85
               

               
Conread position:
               
299-630
               

               
Cow position:
               
chr23:7175677-7175361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
300-568
               

               
Cow position:
               
chr23:1188847-1189099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
239, 29
               

               
Conread position:
               
310-622
               

               
Cow position:
               
chr23:5737665-5737978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
311-605
               

               
Cow position:
               
chr23:11081131-11080847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
311-624
               

               
Cow position:
               
chr23:7402756-7402453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
105, 49
               

               
Conread position:
               
311-626
               

               
Cow position:
               
chr23:20056812-20057122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
314-591
               

               
Cow position:
               
chr23:32662634-32662355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 148
               

               
Conread position:
               
315-490
               

               
Cow position:
               
chr23:2762028-2761854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 80
               

               
Conread position:
               
316-532
               

               
Cow position:
               
chr23:23114082-23113865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 185
               

               
Conread position:
               
316-605
               

               
Cow position:
               
chr23:614852-615145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
316-625
               

               
Cow position:
               
chr23:645378-645077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 137
               

               
Conread position:
               
320-433
               

               
Cow position:
               
chr23:39520403-39520518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
321-568
               

               
Cow position:
               
chr23:1776589-1776828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 113
               

               
Conread position:
               
321-619
               

               
Cow position:
               
chr23:2055749-2055454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 175
               

               
Conread position:
               
321-626
               

               
Cow position:
               
chr23:3918052-3918353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
329-626
               

               
Cow position:
               
chr23:36199325-36199038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 7
               

               
Conread position:
               
331-630
               

               
Cow position:
               
chr23:20753051-20752754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
332-479
               

               
Cow position:
               
chr23:1670936-1670787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
332-607
               

               
Cow position:
               
chr23:670653-670384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
70, 126
               

               
Conread position:
               
332-620
               

               
Cow position:
               
chr23:3140890-3140615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
207, 53
               

               
Conread position:
               
332-629
               

               
Cow position:
               
chr23:791996-792291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 127
               

               
Conread position:
               
332-630
               

               
Cow position:
               
chr23:6720247-6720535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 152
               

               
Conread position:
               
332-630
               

               
Cow position:
               
chr23:39309076-39309374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 175
               

               
Conread position:
               
332-636
               

               
Cow position:
               
chr23:16609772-16610075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
68, 168
               

               
Conread position:
               
332-646
               

               
Cow position:
               
chr23:11380221-11380533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
334-631
               

               
Cow position:
               
chr23:1803818-1803534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
137, 64
               

               
Conread position:
               
335-620
               

               
Cow position:
               
chr23:16237220-16237509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
337-631
               

               
Cow position:
               
chr23:15056613-15056901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
338-492
               

               
Cow position:
               
chr23:9713350-9713187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
338-532
               

               
Cow position:
               
chr23:3955446-3955248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
54, 168
               

               
Conread position:
               
338-620
               

               
Cow position:
               
chr23:20781850-20781575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
44, 37
               

               
Conread position:
               
338-626
               

               
Cow position:
               
chr23:16073270-16072975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
134, 58
               

               
Conread position:
               
339-625
               

               
Cow position:
               
chr23:9594806-9595083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
114, 59
               

               
Conread position:
               
340-469
               

               
Cow position:
               
chr23:8378905-8379032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
341-634
               

               
Cow position:
               
chr23:19978929-19979211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
198, 52
               

               
Conread position:
               
341-646
               

               
Cow position:
               
chr23:4338586-4338883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
342-568
               

               
Cow position:
               
chr23:1068292-1068510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
135, 66
               

               
Conread position:
               
343-568
               

               
Cow position:
               
chr23:39028803-39028587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
343-607
               

               
Cow position:
               
chr23:15607907-15608177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
5, 161
               

               
Conread position:
               
344-603
               

               
Cow position:
               
chr23:3208597-3208851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 98
               

               
Conread position:
               
344-630
               

               
Cow position:
               
chr23:36128887-36129161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 53
               

               
Conread position:
               
344-630
               

               
Cow position:
               
chr23:41285941-41285670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
344-636
               

               
Cow position:
               
chr23:1321186-1321459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
125, 54
               

               
Conread position:
               
345-479
               

               
Cow position:
               
chr23:1929052-1928916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
345-630
               

               
Cow position:
               
chr23:27862350-27862075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 83
               

               
Conread position:
               
346-568
               

               
Cow position:
               
chr23:2371394-2371178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
347-568
               

               
Cow position:
               
chr23:4942092-4942300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
130, 146
               

               
Conread position:
               
347-629
               

               
Cow position:
               
chr23:587411-587137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
133, 27
               

               
Conread position:
               
348-610
               

               
Cow position:
               
chr23:35254227-35254476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
128, 25
               

               
Conread position:
               
350-630
               

               
Cow position:
               
chr23:14191570-14191291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 153
               

               
Conread position:
               
350-630
               

               
Cow position:
               
chr23:18367716-18367437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 144
               

               
Conread position:
               
350-644
               

               
Cow position:
               
chr23:809180-808889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
131, 47
               

               
Conread position:
               
352-619
               

               
Cow position:
               
chr23:12369370-12369628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
353-627
               

               
Cow position:
               
chr23:38854722-38854990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
46, 141
               

               
Conread position:
               
354-642
               

               
Cow position:
               
chr23:32961351-32961639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 152
               

               
Conread position:
               
356-574
               

               
Cow position:
               
chr23:30773667-30773881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
360-607
               

               
Cow position:
               
chr23:14189556-14189794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
360-630
               

               
Cow position:
               
chr23:19537988-19538253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
361-636
               

               
Cow position:
               
chr23:33232903-33233170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 134
               

               
Conread position:
               
366-504
               

               
Cow position:
               
chr23:24809671-24809806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
111, 14
               

               
Conread position:
               
376-630
               

               
Cow position:
               
chr23:25408821-25408581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
80, 119
               

               
Conread position:
               
380-621
               

               
Cow position:
               
chr23:38248878-38248650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
75, 93
               

               
Conread position:
               
385-626
               

               
Cow position:
               
chr23:1991450-1991682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
386-612
               

               
Cow position:
               
chr23:25407471-25407693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
393-568
               

               
Cow position:
               
chr23:30656203-30656372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
86, 97
               

               
Conread position:
               
395-626
               

               
Cow position:
               
chr23:12896641-12896857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
206, 10
               

               
Conread position:
               
395-636
               

               
Cow position:
               
chr23:39793420-39793188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
82, 96
               

               
Conread position:
               
396-646
               

               
Cow position:
               
chr23:21343281-21343521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
397-630
               

               
Cow position:
               
chr23:3745576-3745344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
397-630
               

               
Cow position:
               
chr23:7751149-7750930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
398-605
               

               
Cow position:
               
chr23:25189311-25189105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
141, 102
               

               
Conread position:
               
401-622
               

               
Cow position:
               
chr23:360952-361161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 95
               

               
Conread position:
               
406-619
               

               
Cow position:
               
chr23:36725954-36726162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
131, 89
               

               
Conread position:
               
409-633
               

               
Cow position:
               
chr23:7392336-7392545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
194, 47
               

               
Conread position:
               
409-644
               

               
Cow position:
               
chr23:14662049-14662269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
413-630
               

               
Cow position:
               
chr23:222020-221811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
421-630
               

               
Cow position:
               
chr23:2179699-2179906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
117, 60
               

               
Conread position:
               
421-637
               

               
Cow position:
               
chr23:1690735-1690522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
425-645
               

               
Cow position:
               
chr23:38414023-38414231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
476-647
               

               
Cow position:
               
chr23:11209898-11209733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 17
               
Show alignments to all cow chromosomes.