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Cow genome map

           
Conread name:
           
Ova1-OVRM10096F06
        

               
Conread position:
               
125-630
               

               
Cow position:
               
chr24:13626496-13626004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
129-624
               

               
Cow position:
               
chr24:32054849-32054392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 17
               

               
Conread position:
               
132-452
               

               
Cow position:
               
chr24:41406099-41405783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
133-442
               

               
Cow position:
               
chr24:230488-230172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 99
               

               
Conread position:
               
136-431
               

               
Cow position:
               
chr24:20364207-20364503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 87
               

               
Conread position:
               
143-573
               

               
Cow position:
               
chr24:16510168-16509744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 45
               

               
Conread position:
               
148-624
               

               
Cow position:
               
chr24:7914201-7913719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
148-626
               

               
Cow position:
               
chr24:33621286-33621767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
106, 294
               

               
Conread position:
               
152-636
               

               
Cow position:
               
chr24:44987185-44987665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
158-630
               

               
Cow position:
               
chr24:5142120-5141656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 35
               

               
Conread position:
               
158-630
               

               
Cow position:
               
chr24:11119476-11118995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 240
               

               
Conread position:
               
158-630
               

               
Cow position:
               
chr24:44040833-44041295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
225, 17
               

               
Conread position:
               
159-353
               

               
Cow position:
               
chr24:27203634-27203446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
159-370
               

               
Cow position:
               
chr24:21834781-21834990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 71
               

               
Conread position:
               
159-452
               

               
Cow position:
               
chr24:43832703-43832409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
240, 85
               

               
Conread position:
               
159-454
               

               
Cow position:
               
chr24:37974802-37975097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
159-532
               

               
Cow position:
               
chr24:38006533-38006896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
159-568
               

               
Cow position:
               
chr24:19179255-19179668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 119
               

               
Conread position:
               
159-568
               

               
Cow position:
               
chr24:25194445-25194043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
159-607
               

               
Cow position:
               
chr24:29389396-29388984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 10
               

               
Conread position:
               
159-624
               

               
Cow position:
               
chr24:43028148-43028605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
159-626
               

               
Cow position:
               
chr24:20225924-20225456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
159-630
               

               
Cow position:
               
chr24:11840366-11839893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 46
               

               
Conread position:
               
160-370
               

               
Cow position:
               
chr24:36286748-36286538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
160-626
               

               
Cow position:
               
chr24:3494061-3493612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 94
               

               
Conread position:
               
160-630
               

               
Cow position:
               
chr24:17104392-17104852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
160-637
               

               
Cow position:
               
chr24:28303182-28303640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
68, 123
               

               
Conread position:
               
160-652
               

               
Cow position:
               
chr24:25112376-25111894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
161-358
               

               
Cow position:
               
chr24:28024446-28024260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
161-367
               

               
Cow position:
               
chr24:32890867-32891072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
161-369
               

               
Cow position:
               
chr24:5152705-5152493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
161-415
               

               
Cow position:
               
chr24:27202264-27202013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
161-425
               

               
Cow position:
               
chr24:23000180-22999924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
161-435
               

               
Cow position:
               
chr24:42876724-42876983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
161-475
               

               
Cow position:
               
chr24:27713231-27713541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
121, 69
               

               
Conread position:
               
161-485
               

               
Cow position:
               
chr24:40592893-40592566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 69
               

               
Conread position:
               
161-488
               

               
Cow position:
               
chr24:34390450-34390147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
161-493
               

               
Cow position:
               
chr24:7777455-7777772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
161-493
               

               
Cow position:
               
chr24:18356878-18357209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
211, 23
               

               
Conread position:
               
161-504
               

               
Cow position:
               
chr24:37038070-37037731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
156, 70
               

               
Conread position:
               
161-588
               

               
Cow position:
               
chr24:10499397-10498967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 165
               

               
Conread position:
               
161-619
               

               
Cow position:
               
chr24:27267805-27267360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
161-622
               

               
Cow position:
               
chr24:30313850-30314313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
161-624
               

               
Cow position:
               
chr24:2402198-2402653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
241, 49
               

               
Conread position:
               
161-633
               

               
Cow position:
               
chr24:1269956-1269516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
316, 70
               

               
Conread position:
               
161-633
               

               
Cow position:
               
chr24:29595621-29596099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 338
               

               
Conread position:
               
161-637
               

               
Cow position:
               
chr24:3165998-3165529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
161-638
               

               
Cow position:
               
chr24:42103540-42103083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
162-350
               

               
Cow position:
               
chr24:30945411-30945594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 65
               

               
Conread position:
               
162-436
               

               
Cow position:
               
chr24:28600260-28600537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
110, 31
               

               
Conread position:
               
162-492
               

               
Cow position:
               
chr24:17751930-17752268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
162-565
               

               
Cow position:
               
chr24:34396012-34396394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 40
               

               
Conread position:
               
162-567
               

               
Cow position:
               
chr24:24457064-24457469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
162-612
               

               
Cow position:
               
chr24:42825337-42825765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
315, 48
               

               
Conread position:
               
162-626
               

               
Cow position:
               
chr24:19658712-19658266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
70, 40
               

               
Conread position:
               
162-630
               

               
Cow position:
               
chr24:28553394-28553829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 31
               

               
Conread position:
               
162-638
               

               
Cow position:
               
chr24:34742927-34742456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
163-425
               

               
Cow position:
               
chr24:2992703-2992965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
76, 114
               

               
Conread position:
               
163-435
               

               
Cow position:
               
chr24:39910854-39911134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
68, 118
               

               
Conread position:
               
163-492
               

               
Cow position:
               
chr24:37395030-37395363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 181
               

               
Conread position:
               
163-493
               

               
Cow position:
               
chr24:6450686-6450340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
69, 147
               

               
Conread position:
               
163-498
               

               
Cow position:
               
chr24:29587177-29586832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 52
               

               
Conread position:
               
163-552
               

               
Cow position:
               
chr24:16089406-16089025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
163-553
               

               
Cow position:
               
chr24:352427-352813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 153
               

               
Conread position:
               
163-601
               

               
Cow position:
               
chr24:27149559-27149141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
163-630
               

               
Cow position:
               
chr24:28496406-28496873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
163-630
               

               
Cow position:
               
chr24:32204605-32205081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 218
               

               
Conread position:
               
163-633
               

               
Cow position:
               
chr24:30483767-30484231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 68
               

               
Conread position:
               
163-650
               

               
Cow position:
               
chr24:28722054-28721583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 68
               

               
Conread position:
               
164-630
               

               
Cow position:
               
chr24:37650851-37650385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
69, 339
               

               
Conread position:
               
166-478
               

               
Cow position:
               
chr24:37945472-37945771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
167, 65
               

               
Conread position:
               
166-529
               

               
Cow position:
               
chr24:17832655-17833001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
166-630
               

               
Cow position:
               
chr24:35074256-35073807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 61
               

               
Conread position:
               
167-620
               

               
Cow position:
               
chr24:18374937-18374499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
168-433
               

               
Cow position:
               
chr24:19637759-19637489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
168-619
               

               
Cow position:
               
chr24:18390106-18390562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
64, 157
               

               
Conread position:
               
168-632
               

               
Cow position:
               
chr24:30229646-30229179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 87
               

               
Conread position:
               
169-470
               

               
Cow position:
               
chr24:38478223-38478515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr24:19000214-18999891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
119, 62
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr24:19187103-19186805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
311, 62
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr24:19801010-19800690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
230, 63
               

               
Conread position:
               
169-535
               

               
Cow position:
               
chr24:20801174-20801537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
63, 110
               

               
Conread position:
               
169-541
               

               
Cow position:
               
chr24:21606505-21606860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 145
               

               
Conread position:
               
169-547
               

               
Cow position:
               
chr24:39143783-39143402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 127
               

               
Conread position:
               
169-572
               

               
Cow position:
               
chr24:21519601-21519212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 167
               

               
Conread position:
               
169-602
               

               
Cow position:
               
chr24:41980489-41980922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 162
               

               
Conread position:
               
169-605
               

               
Cow position:
               
chr24:11887324-11886897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 41
               

               
Conread position:
               
169-605
               

               
Cow position:
               
chr24:16995049-16994635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
119, 62
               

               
Conread position:
               
169-611
               

               
Cow position:
               
chr24:27607940-27608364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
227, 62
               

               
Conread position:
               
169-624
               

               
Cow position:
               
chr24:30236043-30235599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
63, 164
               

               
Conread position:
               
169-625
               

               
Cow position:
               
chr24:28063121-28062665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
169-626
               

               
Cow position:
               
chr24:15057555-15057122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
308, 24
               

               
Conread position:
               
169-626
               

               
Cow position:
               
chr24:24490855-24491295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
169-626
               

               
Cow position:
               
chr24:25884977-25885439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 175
               

               
Conread position:
               
169-626
               

               
Cow position:
               
chr24:27844362-27844801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
232, 62
               

               
Conread position:
               
169-626
               

               
Cow position:
               
chr24:28690857-28690419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
169-626
               

               
Cow position:
               
chr24:33098301-33098769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 349
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr24:212141-211696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 62
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr24:18484820-18485285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 112
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr24:19535081-19535529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 227
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr24:33944577-33944122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 212
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr24:27906609-27906142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 89
               

               
Conread position:
               
169-631
               

               
Cow position:
               
chr24:29605862-29606351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
169-636
               

               
Cow position:
               
chr24:19465738-19466224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
169-637
               

               
Cow position:
               
chr24:34272990-34272510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 258
               

               
Conread position:
               
170-425
               

               
Cow position:
               
chr24:19624035-19623771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 188
               

               
Conread position:
               
170-463
               

               
Cow position:
               
chr24:39523280-39523572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 0
               

               
Conread position:
               
170-472
               

               
Cow position:
               
chr24:28234211-28233915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
32, 86
               

               
Conread position:
               
170-493
               

               
Cow position:
               
chr24:16895255-16895592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
45, 261
               

               
Conread position:
               
170-629
               

               
Cow position:
               
chr24:10671567-10671100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
170-629
               

               
Cow position:
               
chr24:27874743-27874318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
369, 40
               

               
Conread position:
               
170-630
               

               
Cow position:
               
chr24:38643807-38643351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 120
               

               
Conread position:
               
170-631
               

               
Cow position:
               
chr24:15861421-15861887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 335
               

               
Conread position:
               
170-647
               

               
Cow position:
               
chr24:17860092-17860553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
225, 61
               

               
Conread position:
               
171-372
               

               
Cow position:
               
chr24:41565931-41566128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 124
               

               
Conread position:
               
171-479
               

               
Cow position:
               
chr24:32739094-32739413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
60, 271
               

               
Conread position:
               
171-490
               

               
Cow position:
               
chr24:16055361-16055649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
310, 46
               

               
Conread position:
               
171-616
               

               
Cow position:
               
chr24:39483632-39483202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
234, 60
               

               
Conread position:
               
171-624
               

               
Cow position:
               
chr24:35675701-35675264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
171-626
               

               
Cow position:
               
chr24:43371412-43370966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
303, 219
               

               
Conread position:
               
172-603
               

               
Cow position:
               
chr24:28349732-28349327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
304, 55
               

               
Conread position:
               
173-547
               

               
Cow position:
               
chr24:6131720-6132079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
222, 20
               

               
Conread position:
               
173-594
               

               
Cow position:
               
chr24:6061234-6061648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
109, 57
               

               
Conread position:
               
173-626
               

               
Cow position:
               
chr24:31812352-31811904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
208, 58
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr24:38841267-38841557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
302, 53
               

               
Conread position:
               
176-488
               

               
Cow position:
               
chr24:4725123-4724822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
296, 44
               

               
Conread position:
               
176-493
               

               
Cow position:
               
chr24:41423760-41423453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
155, 55
               

               
Conread position:
               
176-558
               

               
Cow position:
               
chr24:10126043-10125648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
176-642
               

               
Cow position:
               
chr24:27040214-27039741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
56, 108
               

               
Conread position:
               
176-659
               

               
Cow position:
               
chr24:40130300-40129813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
177-622
               

               
Cow position:
               
chr24:17294032-17294464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
54, 148
               

               
Conread position:
               
177-622
               

               
Cow position:
               
chr24:23556174-23556606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
133, 78
               

               
Conread position:
               
177-626
               

               
Cow position:
               
chr24:18741402-18741852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 221
               

               
Conread position:
               
178-470
               

               
Cow position:
               
chr24:35632143-35631855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
54, 121
               

               
Conread position:
               
179-646
               

               
Cow position:
               
chr24:31816736-31816284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 20
               

               
Conread position:
               
185-629
               

               
Cow position:
               
chr24:20943314-20942893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
217, 9
               

               
Conread position:
               
191-630
               

               
Cow position:
               
chr24:29782313-29781877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 107
               

               
Conread position:
               
194-480
               

               
Cow position:
               
chr24:16645172-16645465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
194-626
               

               
Cow position:
               
chr24:20874826-20874395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
200, 111
               

               
Conread position:
               
202-508
               

               
Cow position:
               
chr24:10300218-10299913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 140
               

               
Conread position:
               
203-568
               

               
Cow position:
               
chr24:31359455-31359099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
274, 53
               

               
Conread position:
               
207-427
               

               
Cow position:
               
chr24:6151920-6151705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
209-630
               

               
Cow position:
               
chr24:29063533-29063931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
268, 13
               

               
Conread position:
               
214-626
               

               
Cow position:
               
chr24:29679187-29679593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
217-568
               

               
Cow position:
               
chr24:31324410-31324056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
224-490
               

               
Cow position:
               
chr24:32071072-32070813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
218, 19
               

               
Conread position:
               
231-449
               

               
Cow position:
               
chr24:27900835-27900617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
159, 59
               

               
Conread position:
               
232-630
               

               
Cow position:
               
chr24:27052383-27052777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
234-508
               

               
Cow position:
               
chr24:34410746-34410476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 78
               

               
Conread position:
               
235-479
               

               
Cow position:
               
chr24:24662029-24662270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
168, 23
               

               
Conread position:
               
235-628
               

               
Cow position:
               
chr24:29171065-29170682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 76
               

               
Conread position:
               
235-646
               

               
Cow position:
               
chr24:18975311-18974900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 21
               

               
Conread position:
               
236-503
               

               
Cow position:
               
chr24:26455942-26455673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
146, 20
               

               
Conread position:
               
245-440
               

               
Cow position:
               
chr24:34496216-34496016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
245-630
               

               
Cow position:
               
chr24:27290965-27290592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 186
               

               
Conread position:
               
246-493
               

               
Cow position:
               
chr24:23186824-23187073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
35, 212
               

               
Conread position:
               
246-630
               

               
Cow position:
               
chr24:18970415-18970777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 151
               

               
Conread position:
               
246-630
               

               
Cow position:
               
chr24:33153869-33153497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
247-401
               

               
Cow position:
               
chr24:28470588-28470742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
247-444
               

               
Cow position:
               
chr24:18615092-18614893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
151, 36
               

               
Conread position:
               
247-465
               

               
Cow position:
               
chr24:16895047-16895258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
204, 17
               

               
Conread position:
               
247-485
               

               
Cow position:
               
chr24:32194600-32194361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
247-488
               

               
Cow position:
               
chr24:18313841-18314099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
86, 247
               

               
Conread position:
               
247-490
               

               
Cow position:
               
chr24:14648267-14648502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
247-493
               

               
Cow position:
               
chr24:5683371-5683122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 87
               

               
Conread position:
               
247-493
               

               
Cow position:
               
chr24:33465530-33465764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
229, 17
               

               
Conread position:
               
247-493
               

               
Cow position:
               
chr24:35576448-35576691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
191, 39
               

               
Conread position:
               
247-535
               

               
Cow position:
               
chr24:22647250-22647535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
103, 67
               

               
Conread position:
               
247-557
               

               
Cow position:
               
chr24:34008481-34008793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
144, 251
               

               
Conread position:
               
247-618
               

               
Cow position:
               
chr24:17955353-17955720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 88
               

               
Conread position:
               
247-625
               

               
Cow position:
               
chr24:41068352-41067989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
247-629
               

               
Cow position:
               
chr24:19769587-19769213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 205
               

               
Conread position:
               
247-629
               

               
Cow position:
               
chr24:32822686-32823066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 22
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr24:18331812-18331451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr24:31159707-31159343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
176, 83
               

               
Conread position:
               
247-631
               

               
Cow position:
               
chr24:43200184-43200560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 15
               

               
Conread position:
               
247-636
               

               
Cow position:
               
chr24:5754927-5754550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
230, 27
               

               
Conread position:
               
247-644
               

               
Cow position:
               
chr24:6102919-6102534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 77
               

               
Conread position:
               
247-650
               

               
Cow position:
               
chr24:35150610-35150225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
153, 83
               

               
Conread position:
               
248-422
               

               
Cow position:
               
chr24:16118451-16118281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
248-624
               

               
Cow position:
               
chr24:29673612-29673240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 33
               

               
Conread position:
               
249-433
               

               
Cow position:
               
chr24:25165124-25164938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
249-437
               

               
Cow position:
               
chr24:12452873-12452683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
142, 45
               

               
Conread position:
               
249-472
               

               
Cow position:
               
chr24:27418014-27418232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
147, 60
               

               
Conread position:
               
249-493
               

               
Cow position:
               
chr24:15347679-15347436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
249-493
               

               
Cow position:
               
chr24:19612096-19611853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
249-505
               

               
Cow position:
               
chr24:35827826-35827572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
130, 10
               

               
Conread position:
               
249-507
               

               
Cow position:
               
chr24:32085841-32086090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
141, 47
               

               
Conread position:
               
249-553
               

               
Cow position:
               
chr24:18786834-18787127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 31
               

               
Conread position:
               
249-565
               

               
Cow position:
               
chr24:12263624-12263924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
110, 53
               

               
Conread position:
               
249-598
               

               
Cow position:
               
chr24:23824332-23824670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
130, 97
               

               
Conread position:
               
249-626
               

               
Cow position:
               
chr24:25678113-25677753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 71
               

               
Conread position:
               
249-627
               

               
Cow position:
               
chr24:39681941-39681573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
142, 62
               

               
Conread position:
               
249-629
               

               
Cow position:
               
chr24:32369827-32370195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
249-630
               

               
Cow position:
               
chr24:814180-814550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
140, 15
               

               
Conread position:
               
249-634
               

               
Cow position:
               
chr24:24250812-24250443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
133, 81
               

               
Conread position:
               
249-638
               

               
Cow position:
               
chr24:1438180-1438560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
136, 210
               

               
Conread position:
               
249-644
               

               
Cow position:
               
chr24:32758673-32759069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
148, 28
               

               
Conread position:
               
249-644
               

               
Cow position:
               
chr24:42943030-42943421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
250-493
               

               
Cow position:
               
chr24:11201559-11201803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
140, 54
               

               
Conread position:
               
250-493
               

               
Cow position:
               
chr24:18017316-18017071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
153, 144
               

               
Conread position:
               
250-565
               

               
Cow position:
               
chr24:14617749-14617436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
92, 49
               

               
Conread position:
               
250-604
               

               
Cow position:
               
chr24:40091492-40091831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
250-626
               

               
Cow position:
               
chr24:7079873-7079510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
208, 88
               

               
Conread position:
               
250-626
               

               
Cow position:
               
chr24:34368918-34369287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 49
               

               
Conread position:
               
251-610
               

               
Cow position:
               
chr24:2970521-2970872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
127, 42
               

               
Conread position:
               
251-644
               

               
Cow position:
               
chr24:6507683-6508062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
251-658
               

               
Cow position:
               
chr24:30860723-30860330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
148, 35
               

               
Conread position:
               
252-505
               

               
Cow position:
               
chr24:28326994-28327253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
144, 83
               

               
Conread position:
               
252-560
               

               
Cow position:
               
chr24:15373492-15373194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
252-598
               

               
Cow position:
               
chr24:26732536-26732194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
242, 53
               

               
Conread position:
               
252-626
               

               
Cow position:
               
chr24:43432877-43432521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
222, 100
               

               
Conread position:
               
253-644
               

               
Cow position:
               
chr24:33723759-33724150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
255-490
               

               
Cow position:
               
chr24:19736251-19736482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
130, 9
               

               
Conread position:
               
256-593
               

               
Cow position:
               
chr24:2095799-2096137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
103, 248
               

               
Conread position:
               
256-627
               

               
Cow position:
               
chr24:43364441-43364081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 76
               

               
Conread position:
               
257-593
               

               
Cow position:
               
chr24:27054493-27054152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
133, 244
               

               
Conread position:
               
257-619
               

               
Cow position:
               
chr24:35529989-35529649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
257-626
               

               
Cow position:
               
chr24:12851787-12851452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
258-480
               

               
Cow position:
               
chr24:39791622-39791397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
258-568
               

               
Cow position:
               
chr24:33221861-33222163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
114, 25
               

               
Conread position:
               
258-602
               

               
Cow position:
               
chr24:41755943-41755606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 84
               

               
Conread position:
               
258-622
               

               
Cow position:
               
chr24:18024893-18025248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
119, 70
               

               
Conread position:
               
258-653
               

               
Cow position:
               
chr24:16556563-16556940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
137, 41
               

               
Conread position:
               
259-624
               

               
Cow position:
               
chr24:3430813-3430456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
136, 79
               

               
Conread position:
               
259-626
               

               
Cow position:
               
chr24:14746728-14746356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
259-634
               

               
Cow position:
               
chr24:27725932-27726295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
136, 239
               

               
Conread position:
               
259-644
               

               
Cow position:
               
chr24:39350136-39350507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
134, 97
               

               
Conread position:
               
259-657
               

               
Cow position:
               
chr24:8886990-8886604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
95, 134
               

               
Conread position:
               
260-472
               

               
Cow position:
               
chr24:28045840-28045621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 188
               

               
Conread position:
               
261-628
               

               
Cow position:
               
chr24:17412804-17412454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
194, 64
               

               
Conread position:
               
263-626
               

               
Cow position:
               
chr24:2675391-2675050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
208, 105
               

               
Conread position:
               
264-534
               

               
Cow position:
               
chr24:17434685-17434419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
225, 64
               

               
Conread position:
               
264-588
               

               
Cow position:
               
chr24:24755522-24755206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
115, 178
               

               
Conread position:
               
265-653
               

               
Cow position:
               
chr24:18243393-18243775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
100, 234
               

               
Conread position:
               
266-441
               

               
Cow position:
               
chr24:21895122-21894945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
124, 45
               

               
Conread position:
               
268-468
               

               
Cow position:
               
chr24:19905766-19905947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
272-569
               

               
Cow position:
               
chr24:20249829-20250128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 229
               

               
Conread position:
               
272-631
               

               
Cow position:
               
chr24:23616764-23616409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 225
               

               
Conread position:
               
273-626
               

               
Cow position:
               
chr24:39440502-39440839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
199, 109
               

               
Conread position:
               
273-629
               

               
Cow position:
               
chr24:32693785-32693418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
117, 237
               

               
Conread position:
               
273-630
               

               
Cow position:
               
chr24:25321051-25320704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
199, 117
               

               
Conread position:
               
273-630
               

               
Cow position:
               
chr24:38815033-38814686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
116, 171
               

               
Conread position:
               
273-635
               

               
Cow position:
               
chr24:42344931-42345298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
123, 224
               

               
Conread position:
               
274-528
               

               
Cow position:
               
chr24:26554532-26554787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
122, 156
               

               
Conread position:
               
280-463
               

               
Cow position:
               
chr24:6957555-6957382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
280-646
               

               
Cow position:
               
chr24:36404085-36404447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
115, 16
               

               
Conread position:
               
281-493
               

               
Cow position:
               
chr24:39808186-39807983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
281-535
               

               
Cow position:
               
chr24:30897478-30897731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
114, 213
               

               
Conread position:
               
281-619
               

               
Cow position:
               
chr24:19136-19495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 157
               

               
Conread position:
               
283-467
               

               
Cow position:
               
chr24:40837828-40837648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
283-539
               

               
Cow position:
               
chr24:14171633-14171891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
283-607
               

               
Cow position:
               
chr24:12993097-12992793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 60
               

               
Conread position:
               
284-568
               

               
Cow position:
               
chr24:40850216-40849935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
210, 50
               

               
Conread position:
               
286-630
               

               
Cow position:
               
chr24:41986048-41985691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
110, 43
               

               
Conread position:
               
287-550
               

               
Cow position:
               
chr24:12572580-12572317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
289-626
               

               
Cow position:
               
chr24:6150073-6149749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 129
               

               
Conread position:
               
289-644
               

               
Cow position:
               
chr24:30544816-30545156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 41
               

               
Conread position:
               
290-472
               

               
Cow position:
               
chr24:24061759-24061944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
103, 24
               

               
Conread position:
               
298-631
               

               
Cow position:
               
chr24:16625444-16625787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
298-650
               

               
Cow position:
               
chr24:23685025-23685367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
85, 154
               

               
Conread position:
               
298-659
               

               
Cow position:
               
chr24:28028667-28029020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
90, 61
               

               
Conread position:
               
299-560
               

               
Cow position:
               
chr24:5632991-5633252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 200
               

               
Conread position:
               
299-630
               

               
Cow position:
               
chr24:27340979-27341309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
18, 199
               

               
Conread position:
               
300-568
               

               
Cow position:
               
chr24:18771141-18771410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 149
               

               
Conread position:
               
300-601
               

               
Cow position:
               
chr24:39905417-39905718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
174, 56
               

               
Conread position:
               
300-603
               

               
Cow position:
               
chr24:17407428-17407131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
90, 146
               

               
Conread position:
               
303-477
               

               
Cow position:
               
chr24:15707409-15707579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
303-623
               

               
Cow position:
               
chr24:3152541-3152854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
303-624
               

               
Cow position:
               
chr24:20024649-20024328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
168, 102
               

               
Conread position:
               
306-625
               

               
Cow position:
               
chr24:21768677-21768362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
175, 52
               

               
Conread position:
               
309-535
               

               
Cow position:
               
chr24:28253737-28253513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
311-484
               

               
Cow position:
               
chr24:36008514-36008338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 97
               

               
Conread position:
               
311-581
               

               
Cow position:
               
chr24:10012780-10012536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
163, 78
               

               
Conread position:
               
311-626
               

               
Cow position:
               
chr24:35795250-35795564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
90, 83
               

               
Conread position:
               
311-630
               

               
Cow position:
               
chr24:34565147-34564843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
314-581
               

               
Cow position:
               
chr24:10841182-10841452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
86, 181
               

               
Conread position:
               
315-566
               

               
Cow position:
               
chr24:13297690-13297935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 60
               

               
Conread position:
               
315-624
               

               
Cow position:
               
chr24:591925-591631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
157, 18
               

               
Conread position:
               
315-630
               

               
Cow position:
               
chr24:35332749-35332434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
28, 197
               

               
Conread position:
               
316-628
               

               
Cow position:
               
chr24:39955027-39955329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
161, 75
               

               
Conread position:
               
319-638
               

               
Cow position:
               
chr24:7917341-7917660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
82, 179
               

               
Conread position:
               
320-626
               

               
Cow position:
               
chr24:37246204-37246499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
181, 13
               

               
Conread position:
               
320-653
               

               
Cow position:
               
chr24:25425063-25424753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
160, 52
               

               
Conread position:
               
321-562
               

               
Cow position:
               
chr24:39833497-39833733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
156, 75
               

               
Conread position:
               
321-637
               

               
Cow position:
               
chr24:44809269-44808953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 182
               

               
Conread position:
               
322-636
               

               
Cow position:
               
chr24:11005687-11005371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 184
               

               
Conread position:
               
329-625
               

               
Cow position:
               
chr24:41301855-41302166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
143, 18
               

               
Conread position:
               
330-493
               

               
Cow position:
               
chr24:30226948-30226784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
141, 19
               

               
Conread position:
               
331-626
               

               
Cow position:
               
chr24:6342187-6341888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
117, 54
               

               
Conread position:
               
332-494
               

               
Cow position:
               
chr24:14103597-14103431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
58, 93
               

               
Conread position:
               
332-618
               

               
Cow position:
               
chr24:16476413-16476134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 118
               

               
Conread position:
               
332-624
               

               
Cow position:
               
chr24:35794728-35795019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 106
               

               
Conread position:
               
332-638
               

               
Cow position:
               
chr24:39159540-39159837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 91
               

               
Conread position:
               
333-546
               

               
Cow position:
               
chr24:19634079-19633868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
57, 156
               

               
Conread position:
               
334-622
               

               
Cow position:
               
chr24:15473363-15473078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
141, 71
               

               
Conread position:
               
335-528
               

               
Cow position:
               
chr24:5694-5884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
335-626
               

               
Cow position:
               
chr24:21093461-21093742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
335-628
               

               
Cow position:
               
chr24:27633416-27633130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
337-626
               

               
Cow position:
               
chr24:39218838-39219127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
338-636
               

               
Cow position:
               
chr24:43635439-43635144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
340-528
               

               
Cow position:
               
chr24:34782789-34782973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
340-630
               

               
Cow position:
               
chr24:18405312-18405589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 127
               

               
Conread position:
               
340-636
               

               
Cow position:
               
chr24:34315355-34315067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 173
               

               
Conread position:
               
341-498
               

               
Cow position:
               
chr24:27552892-27552734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
136, 57
               

               
Conread position:
               
341-630
               

               
Cow position:
               
chr24:42007738-42007461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
343-503
               

               
Cow position:
               
chr24:27202596-27202430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
343-575
               

               
Cow position:
               
chr24:28332277-28332515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
5, 52
               

               
Conread position:
               
344-623
               

               
Cow position:
               
chr24:36554838-36555106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
344-659
               

               
Cow position:
               
chr24:17363653-17363955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
345-657
               

               
Cow position:
               
chr24:39259155-39258852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 87
               

               
Conread position:
               
346-504
               

               
Cow position:
               
chr24:885695-885854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
346-622
               

               
Cow position:
               
chr24:27968077-27967803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
346-630
               

               
Cow position:
               
chr24:36486072-36486344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
347-568
               

               
Cow position:
               
chr24:18695611-18695398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
347-624
               

               
Cow position:
               
chr24:27719768-27720031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
347-624
               

               
Cow position:
               
chr24:42580849-42581110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
347-630
               

               
Cow position:
               
chr24:3631495-3631232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
347-644
               

               
Cow position:
               
chr24:40184616-40184324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr24:17567376-17567109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
350-630
               

               
Cow position:
               
chr24:20861971-20862241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
350-630
               

               
Cow position:
               
chr24:35572473-35572202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 46
               

               
Conread position:
               
350-659
               

               
Cow position:
               
chr24:24136872-24137166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
353-626
               

               
Cow position:
               
chr24:6913776-6914045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 146
               

               
Conread position:
               
354-598
               

               
Cow position:
               
chr24:27207210-27207448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
355-626
               

               
Cow position:
               
chr24:11876872-11876602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
356-615
               

               
Cow position:
               
chr24:5152219-5151965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
357-633
               

               
Cow position:
               
chr24:29028023-29027761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
120, 49
               

               
Conread position:
               
357-652
               

               
Cow position:
               
chr24:27941031-27941315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
360-604
               

               
Cow position:
               
chr24:21860243-21860480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 145
               

               
Conread position:
               
374-633
               

               
Cow position:
               
chr24:43733941-43733681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
5, 128
               

               
Conread position:
               
375-614
               

               
Cow position:
               
chr24:40055766-40055991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
379-626
               

               
Cow position:
               
chr24:27543521-27543757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
382-630
               

               
Cow position:
               
chr24:38347641-38347394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
90, 117
               

               
Conread position:
               
384-616
               

               
Cow position:
               
chr24:37204925-37205150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
386-630
               

               
Cow position:
               
chr24:39493247-39493011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 111
               

               
Conread position:
               
392-626
               

               
Cow position:
               
chr24:20969853-20970073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
86, 104
               

               
Conread position:
               
393-574
               

               
Cow position:
               
chr24:40673487-40673666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 104
               

               
Conread position:
               
398-567
               

               
Cow position:
               
chr24:29539967-29540133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 102
               

               
Conread position:
               
400-619
               

               
Cow position:
               
chr24:31388470-31388259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
139, 72
               

               
Conread position:
               
400-624
               

               
Cow position:
               
chr24:27810125-27809902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
137, 86
               

               
Conread position:
               
400-626
               

               
Cow position:
               
chr24:6160911-6161128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
401-621
               

               
Cow position:
               
chr24:18324559-18324339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
71, 97
               

               
Conread position:
               
401-644
               

               
Cow position:
               
chr24:6677449-6677203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
405-630
               

               
Cow position:
               
chr24:6071531-6071310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
26, 91
               

               
Conread position:
               
407-623
               

               
Cow position:
               
chr24:11007151-11006937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 90
               

               
Conread position:
               
407-636
               

               
Cow position:
               
chr24:33238611-33238840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
409-625
               

               
Cow position:
               
chr24:6900756-6900544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
409-631
               

               
Cow position:
               
chr24:38375214-38374999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
68, 87
               

               
Conread position:
               
410-610
               

               
Cow position:
               
chr24:18734423-18734620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
416-646
               

               
Cow position:
               
chr24:2730651-2730871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
422-630
               

               
Cow position:
               
chr24:8770501-8770299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
425-631
               

               
Cow position:
               
chr24:26846360-26846564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
439-653
               

               
Cow position:
               
chr24:42816895-42816689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 62
               
Show alignments to all cow chromosomes.