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Cow genome map

           
Conread name:
           
Ova1-OVRM10096F06
        

               
Conread position:
               
126-568
               

               
Cow position:
               
chr27:11480912-11480474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
124, 30
               

               
Conread position:
               
128-369
               

               
Cow position:
               
chr27:17102620-17102858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
128-437
               

               
Cow position:
               
chr27:13255070-13254772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
128-567
               

               
Cow position:
               
chr27:22513962-22513520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 312
               

               
Conread position:
               
128-568
               

               
Cow position:
               
chr27:27270825-27270382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
133-370
               

               
Cow position:
               
chr27:27648588-27648354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
133-630
               

               
Cow position:
               
chr27:22220273-22220771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
28, 350
               

               
Conread position:
               
143-630
               

               
Cow position:
               
chr27:10979596-10980081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
148-607
               

               
Cow position:
               
chr27:18031330-18030865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
208, 106
               

               
Conread position:
               
149-636
               

               
Cow position:
               
chr27:25809777-25809300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 111
               

               
Conread position:
               
152-445
               

               
Cow position:
               
chr27:212697-213003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
154-604
               

               
Cow position:
               
chr27:22330912-22330478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 75
               

               
Conread position:
               
156-485
               

               
Cow position:
               
chr27:23735715-23736042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
157-358
               

               
Cow position:
               
chr27:1184424-1184226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
159-389
               

               
Cow position:
               
chr27:9977437-9977667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
159-445
               

               
Cow position:
               
chr27:31386877-31386603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
195, 10
               

               
Conread position:
               
159-479
               

               
Cow position:
               
chr27:4944756-4944445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
159-488
               

               
Cow position:
               
chr27:20749249-20748928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
226, 10
               

               
Conread position:
               
159-490
               

               
Cow position:
               
chr27:26226537-26226204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
238, 118
               

               
Conread position:
               
159-493
               

               
Cow position:
               
chr27:23510726-23511078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
159-568
               

               
Cow position:
               
chr27:24477178-24477572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
232, 17
               

               
Conread position:
               
159-606
               

               
Cow position:
               
chr27:22547637-22547211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
318, 72
               

               
Conread position:
               
159-619
               

               
Cow position:
               
chr27:13251782-13252215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
159-626
               

               
Cow position:
               
chr27:22439889-22440355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
159-629
               

               
Cow position:
               
chr27:17397700-17397233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 71
               

               
Conread position:
               
159-630
               

               
Cow position:
               
chr27:22035620-22035156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 116
               

               
Conread position:
               
159-630
               

               
Cow position:
               
chr27:28932049-28931570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
159-633
               

               
Cow position:
               
chr27:17472564-17473033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
5, 62
               

               
Conread position:
               
160-535
               

               
Cow position:
               
chr27:19500484-19500107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
90, 240
               

               
Conread position:
               
160-622
               

               
Cow position:
               
chr27:15669022-15668558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 101
               

               
Conread position:
               
160-629
               

               
Cow position:
               
chr27:28018075-28018553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 268
               

               
Conread position:
               
160-630
               

               
Cow position:
               
chr27:14670628-14670165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 71
               

               
Conread position:
               
160-630
               

               
Cow position:
               
chr27:23128219-23128671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
160-631
               

               
Cow position:
               
chr27:19589235-19589693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
156, 36
               

               
Conread position:
               
161-370
               

               
Cow position:
               
chr27:6162650-6162447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
161-385
               

               
Cow position:
               
chr27:18435377-18435155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
161-391
               

               
Cow position:
               
chr27:29388425-29388655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
111, 224
               

               
Conread position:
               
161-426
               

               
Cow position:
               
chr27:11561528-11561796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
161-544
               

               
Cow position:
               
chr27:7649837-7649453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
161-560
               

               
Cow position:
               
chr27:3306539-3306921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 65
               

               
Conread position:
               
161-562
               

               
Cow position:
               
chr27:27460825-27460422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
161-565
               

               
Cow position:
               
chr27:14343682-14343315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
161-568
               

               
Cow position:
               
chr27:15409272-15408888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
206, 70
               

               
Conread position:
               
161-604
               

               
Cow position:
               
chr27:26424823-26424395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
167, 70
               

               
Conread position:
               
161-607
               

               
Cow position:
               
chr27:19546768-19546310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 180
               

               
Conread position:
               
161-626
               

               
Cow position:
               
chr27:8962488-8962056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
200, 36
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr27:2957170-2957625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 69
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr27:13411615-13411141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 72
               

               
Conread position:
               
161-630
               

               
Cow position:
               
chr27:28190438-28190000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
139, 70
               

               
Conread position:
               
161-631
               

               
Cow position:
               
chr27:28518043-28518503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
17, 103
               

               
Conread position:
               
161-636
               

               
Cow position:
               
chr27:24446384-24445933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
234, 15
               

               
Conread position:
               
161-639
               

               
Cow position:
               
chr27:28206557-28207024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
232, 83
               

               
Conread position:
               
162-363
               

               
Cow position:
               
chr27:25790057-25790248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
162-389
               

               
Cow position:
               
chr27:22245396-22245608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
162-477
               

               
Cow position:
               
chr27:23545584-23545254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
53, 267
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr27:16088545-16088882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
162-487
               

               
Cow position:
               
chr27:29236313-29236663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
162-493
               

               
Cow position:
               
chr27:27442406-27442082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
229, 69
               

               
Conread position:
               
162-602
               

               
Cow position:
               
chr27:8571283-8570846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 125
               

               
Conread position:
               
162-605
               

               
Cow position:
               
chr27:16705007-16705439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 93
               

               
Conread position:
               
162-630
               

               
Cow position:
               
chr27:7412148-7412600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
315, 230
               

               
Conread position:
               
162-635
               

               
Cow position:
               
chr27:26434059-26433590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 119
               

               
Conread position:
               
162-636
               

               
Cow position:
               
chr27:8630120-8629651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
163-387
               

               
Cow position:
               
chr27:8790987-8790761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
163-419
               

               
Cow position:
               
chr27:26437365-26437105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 93
               

               
Conread position:
               
163-438
               

               
Cow position:
               
chr27:19932821-19933097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 212
               

               
Conread position:
               
163-467
               

               
Cow position:
               
chr27:20514580-20514882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
163-473
               

               
Cow position:
               
chr27:27405313-27405002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
163-477
               

               
Cow position:
               
chr27:1536953-1536645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
230, 72
               

               
Conread position:
               
163-478
               

               
Cow position:
               
chr27:16965330-16965645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
85, 194
               

               
Conread position:
               
163-483
               

               
Cow position:
               
chr27:6924837-6925167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
163-490
               

               
Cow position:
               
chr27:28896633-28896959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
69, 176
               

               
Conread position:
               
163-607
               

               
Cow position:
               
chr27:15867148-15867585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
173, 68
               

               
Conread position:
               
163-625
               

               
Cow position:
               
chr27:23632364-23632812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
253, 41
               

               
Conread position:
               
163-627
               

               
Cow position:
               
chr27:20354355-20354794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
163-628
               

               
Cow position:
               
chr27:8062596-8062143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 113
               

               
Conread position:
               
163-630
               

               
Cow position:
               
chr27:1353336-1353800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
163-630
               

               
Cow position:
               
chr27:4390501-4390037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
163-630
               

               
Cow position:
               
chr27:6541390-6541842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 68
               

               
Conread position:
               
163-633
               

               
Cow position:
               
chr27:27020340-27019880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
163-636
               

               
Cow position:
               
chr27:16284243-16284696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
6, 96
               

               
Conread position:
               
163-636
               

               
Cow position:
               
chr27:24228049-24227570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
164-568
               

               
Cow position:
               
chr27:29431232-29431616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
313, 67
               

               
Conread position:
               
164-630
               

               
Cow position:
               
chr27:28002047-28001605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 67
               

               
Conread position:
               
165-490
               

               
Cow position:
               
chr27:17995189-17994857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 121
               

               
Conread position:
               
166-443
               

               
Cow position:
               
chr27:25151847-25152120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 131
               

               
Conread position:
               
166-449
               

               
Cow position:
               
chr27:29593870-29593585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
166-638
               

               
Cow position:
               
chr27:27632835-27632384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
311, 54
               

               
Conread position:
               
166-643
               

               
Cow position:
               
chr27:12596540-12596987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 65
               

               
Conread position:
               
168-476
               

               
Cow position:
               
chr27:26481437-26481142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 148
               

               
Conread position:
               
168-636
               

               
Cow position:
               
chr27:18543748-18544221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
128, 63
               

               
Conread position:
               
169-427
               

               
Cow position:
               
chr27:26794023-26793767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
169-439
               

               
Cow position:
               
chr27:1637165-1636902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
221, 62
               

               
Conread position:
               
169-446
               

               
Cow position:
               
chr27:12459049-12459321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 162
               

               
Conread position:
               
169-470
               

               
Cow position:
               
chr27:26112157-26111845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr27:22386649-22386958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
221, 88
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr27:23594080-23594404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 151
               

               
Conread position:
               
169-493
               

               
Cow position:
               
chr27:29185084-29184750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
169-555
               

               
Cow position:
               
chr27:17331253-17331645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
62, 120
               

               
Conread position:
               
169-568
               

               
Cow position:
               
chr27:27438747-27438349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
80, 155
               

               
Conread position:
               
169-625
               

               
Cow position:
               
chr27:299613-299171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
223, 38
               

               
Conread position:
               
169-628
               

               
Cow position:
               
chr27:18507406-18507847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 228
               

               
Conread position:
               
169-628
               

               
Cow position:
               
chr27:27389266-27388813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 110
               

               
Conread position:
               
169-629
               

               
Cow position:
               
chr27:30890062-30890503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
308, 60
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr27:7935394-7934946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
169-630
               

               
Cow position:
               
chr27:23929739-23930181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 62
               

               
Conread position:
               
169-632
               

               
Cow position:
               
chr27:18558119-18558583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 164
               

               
Conread position:
               
169-634
               

               
Cow position:
               
chr27:13875494-13875949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
76, 119
               

               
Conread position:
               
169-635
               

               
Cow position:
               
chr27:12515955-12516421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
51, 88
               

               
Conread position:
               
169-636
               

               
Cow position:
               
chr27:28922134-28921673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 155
               

               
Conread position:
               
169-636
               

               
Cow position:
               
chr27:30868990-30868517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 316
               

               
Conread position:
               
169-648
               

               
Cow position:
               
chr27:2592298-2592778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 341
               

               
Conread position:
               
169-659
               

               
Cow position:
               
chr27:10307542-10307047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 168
               

               
Conread position:
               
170-490
               

               
Cow position:
               
chr27:15865372-15865691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
216, 59
               

               
Conread position:
               
170-550
               

               
Cow position:
               
chr27:426732-427110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
80, 164
               

               
Conread position:
               
170-607
               

               
Cow position:
               
chr27:30914769-30915196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
170-622
               

               
Cow position:
               
chr27:19387783-19388228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
170-626
               

               
Cow position:
               
chr27:6499820-6500278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 240
               

               
Conread position:
               
170-626
               

               
Cow position:
               
chr27:20283406-20283844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 62
               

               
Conread position:
               
170-628
               

               
Cow position:
               
chr27:22171064-22171513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 85
               

               
Conread position:
               
171-451
               

               
Cow position:
               
chr27:23484979-23485258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
171-493
               

               
Cow position:
               
chr27:16103574-16103895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
78, 105
               

               
Conread position:
               
171-629
               

               
Cow position:
               
chr27:23452226-23452696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 170
               

               
Conread position:
               
171-630
               

               
Cow position:
               
chr27:16786594-16787044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
171-636
               

               
Cow position:
               
chr27:21978380-21977914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
173-370
               

               
Cow position:
               
chr27:19452764-19452965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
173-493
               

               
Cow position:
               
chr27:22560061-22559733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 47
               

               
Conread position:
               
174-470
               

               
Cow position:
               
chr27:22489038-22489342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 243
               

               
Conread position:
               
175-630
               

               
Cow position:
               
chr27:21393726-21393287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 56
               

               
Conread position:
               
175-630
               

               
Cow position:
               
chr27:26509389-26508944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 126
               

               
Conread position:
               
176-626
               

               
Cow position:
               
chr27:7959063-7958622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
56, 100
               

               
Conread position:
               
176-628
               

               
Cow position:
               
chr27:29831940-29831473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
55, 325
               

               
Conread position:
               
176-630
               

               
Cow position:
               
chr27:11435559-11435116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
55, 109
               

               
Conread position:
               
176-646
               

               
Cow position:
               
chr27:30764801-30765265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 121
               

               
Conread position:
               
177-458
               

               
Cow position:
               
chr27:23859932-23860221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
55, 113
               

               
Conread position:
               
177-493
               

               
Cow position:
               
chr27:20637289-20636978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
295, 96
               

               
Conread position:
               
177-562
               

               
Cow position:
               
chr27:26490136-26489752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
215, 78
               

               
Conread position:
               
177-616
               

               
Cow position:
               
chr27:23554560-23554117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 135
               

               
Conread position:
               
177-630
               

               
Cow position:
               
chr27:26428359-26427911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 85
               

               
Conread position:
               
177-644
               

               
Cow position:
               
chr27:19660697-19661174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 230
               

               
Conread position:
               
178-493
               

               
Cow position:
               
chr27:26188597-26188910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 161
               

               
Conread position:
               
178-624
               

               
Cow position:
               
chr27:13318207-13317743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
54, 339
               

               
Conread position:
               
179-448
               

               
Cow position:
               
chr27:10653453-10653728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
179-453
               

               
Cow position:
               
chr27:23108131-23107854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
53, 168
               

               
Conread position:
               
179-614
               

               
Cow position:
               
chr27:18739145-18739590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
70, 333
               

               
Conread position:
               
179-616
               

               
Cow position:
               
chr27:19685939-19685511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
210, 25
               

               
Conread position:
               
180-604
               

               
Cow position:
               
chr27:27554908-27554495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
181-568
               

               
Cow position:
               
chr27:23890706-23891093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 320
               

               
Conread position:
               
182-626
               

               
Cow position:
               
chr27:26238798-26239237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
50, 95
               

               
Conread position:
               
194-634
               

               
Cow position:
               
chr27:15925128-15925557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
38, 199
               

               
Conread position:
               
199-636
               

               
Cow position:
               
chr27:1768831-1768412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
210-638
               

               
Cow position:
               
chr27:27064638-27064217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
39, 216
               

               
Conread position:
               
217-468
               

               
Cow position:
               
chr27:28260725-28260477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
177, 121
               

               
Conread position:
               
224-653
               

               
Cow position:
               
chr27:29019916-29019507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
230, 75
               

               
Conread position:
               
235-448
               

               
Cow position:
               
chr27:17918485-17918273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
235-506
               

               
Cow position:
               
chr27:28245632-28245900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
236-630
               

               
Cow position:
               
chr27:27039008-27038627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
148, 94
               

               
Conread position:
               
237-454
               

               
Cow position:
               
chr27:2034339-2034564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
117, 56
               

               
Conread position:
               
237-643
               

               
Cow position:
               
chr27:30374736-30374340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
232, 18
               

               
Conread position:
               
239-631
               

               
Cow position:
               
chr27:536297-536675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
148, 20
               

               
Conread position:
               
242-493
               

               
Cow position:
               
chr27:12191644-12191401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
25, 133
               

               
Conread position:
               
244-445
               

               
Cow position:
               
chr27:20812742-20812950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
244-476
               

               
Cow position:
               
chr27:31017988-31017764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
244-603
               

               
Cow position:
               
chr27:20037277-20036938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 39
               

               
Conread position:
               
245-493
               

               
Cow position:
               
chr27:29504808-29504559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
150, 11
               

               
Conread position:
               
245-554
               

               
Cow position:
               
chr27:16589863-16589571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
231, 14
               

               
Conread position:
               
245-626
               

               
Cow position:
               
chr27:20549873-20549479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
78, 201
               

               
Conread position:
               
246-485
               

               
Cow position:
               
chr27:30389458-30389215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
246-626
               

               
Cow position:
               
chr27:21453254-21452857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
246-631
               

               
Cow position:
               
chr27:22418927-22418548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 96
               

               
Conread position:
               
247-441
               

               
Cow position:
               
chr27:14303578-14303769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
247-470
               

               
Cow position:
               
chr27:7974017-7974238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
247-475
               

               
Cow position:
               
chr27:22225752-22225526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
149, 82
               

               
Conread position:
               
247-484
               

               
Cow position:
               
chr27:15215067-15215311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
247-489
               

               
Cow position:
               
chr27:22603026-22603255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
227, 82
               

               
Conread position:
               
247-490
               

               
Cow position:
               
chr27:29380695-29380944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 41
               

               
Conread position:
               
247-501
               

               
Cow position:
               
chr27:8263498-8263237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 199
               

               
Conread position:
               
247-568
               

               
Cow position:
               
chr27:15643015-15643331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 56
               

               
Conread position:
               
247-603
               

               
Cow position:
               
chr27:30988638-30988989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
229, 78
               

               
Conread position:
               
247-605
               

               
Cow position:
               
chr27:27003418-27003089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
247-626
               

               
Cow position:
               
chr27:19717755-19718133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
127, 193
               

               
Conread position:
               
247-626
               

               
Cow position:
               
chr27:24331561-24331939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 104
               

               
Conread position:
               
247-627
               

               
Cow position:
               
chr27:30359247-30359609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 177
               

               
Conread position:
               
247-629
               

               
Cow position:
               
chr27:4386221-4385849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 237
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr27:6550304-6550668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr27:20795633-20796001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
247-630
               

               
Cow position:
               
chr27:26643530-26643890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
247-631
               

               
Cow position:
               
chr27:26413414-26413037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
152, 255
               

               
Conread position:
               
247-631
               

               
Cow position:
               
chr27:27641170-27640774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 26
               

               
Conread position:
               
247-633
               

               
Cow position:
               
chr27:4672852-4673241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 249
               

               
Conread position:
               
247-646
               

               
Cow position:
               
chr27:23882527-23882141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 79
               

               
Conread position:
               
247-659
               

               
Cow position:
               
chr27:8942849-8942438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
93, 151
               

               
Conread position:
               
248-625
               

               
Cow position:
               
chr27:12246495-12246872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 86
               

               
Conread position:
               
248-625
               

               
Cow position:
               
chr27:26299685-26300051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
207, 11
               

               
Conread position:
               
248-629
               

               
Cow position:
               
chr27:1291008-1290652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
249-456
               

               
Cow position:
               
chr27:2847697-2847902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
147, 28
               

               
Conread position:
               
249-468
               

               
Cow position:
               
chr27:6883876-6884082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
249-478
               

               
Cow position:
               
chr27:19083874-19083645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
249-489
               

               
Cow position:
               
chr27:24509661-24509901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
157, 141
               

               
Conread position:
               
249-561
               

               
Cow position:
               
chr27:12244283-12243987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
139, 43
               

               
Conread position:
               
249-568
               

               
Cow position:
               
chr27:23662750-23662449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
206, 50
               

               
Conread position:
               
249-619
               

               
Cow position:
               
chr27:19648100-19647738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 103
               

               
Conread position:
               
249-626
               

               
Cow position:
               
chr27:21138673-21139038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 82
               

               
Conread position:
               
249-626
               

               
Cow position:
               
chr27:27050065-27049699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
249-628
               

               
Cow position:
               
chr27:29039099-29038725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 46
               

               
Conread position:
               
249-630
               

               
Cow position:
               
chr27:6454053-6454430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 22
               

               
Conread position:
               
249-630
               

               
Cow position:
               
chr27:26441205-26440841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 54
               

               
Conread position:
               
249-630
               

               
Cow position:
               
chr27:26492852-26492483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
249-630
               

               
Cow position:
               
chr27:27233862-27234239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
249-634
               

               
Cow position:
               
chr27:27053138-27053518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
150, 50
               

               
Conread position:
               
249-644
               

               
Cow position:
               
chr27:21578732-21578371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
249-653
               

               
Cow position:
               
chr27:11416294-11416678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
250-490
               

               
Cow position:
               
chr27:31148605-31148846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
142, 17
               

               
Conread position:
               
250-493
               

               
Cow position:
               
chr27:30261049-30260804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
79, 197
               

               
Conread position:
               
250-522
               

               
Cow position:
               
chr27:674187-673927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
92, 123
               

               
Conread position:
               
250-535
               

               
Cow position:
               
chr27:8168587-8168304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
215, 248
               

               
Conread position:
               
250-565
               

               
Cow position:
               
chr27:28271307-28270994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
117, 124
               

               
Conread position:
               
250-603
               

               
Cow position:
               
chr27:14937586-14937238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
140, 53
               

               
Conread position:
               
250-644
               

               
Cow position:
               
chr27:25998545-25998937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 125
               

               
Conread position:
               
250-646
               

               
Cow position:
               
chr27:8048888-8048506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
150, 27
               

               
Conread position:
               
251-434
               

               
Cow position:
               
chr27:22423360-22423538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
251-470
               

               
Cow position:
               
chr27:20085401-20085628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
251-507
               

               
Cow position:
               
chr27:24371087-24371340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
158, 52
               

               
Conread position:
               
251-604
               

               
Cow position:
               
chr27:25276987-25277328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
150, 79
               

               
Conread position:
               
251-626
               

               
Cow position:
               
chr27:22454933-22454565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
5, 137
               

               
Conread position:
               
251-626
               

               
Cow position:
               
chr27:23483071-23483436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
152, 79
               

               
Conread position:
               
251-630
               

               
Cow position:
               
chr27:26581592-26581229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
157, 247
               

               
Conread position:
               
252-630
               

               
Cow position:
               
chr27:22723848-22723489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
226, 126
               

               
Conread position:
               
252-644
               

               
Cow position:
               
chr27:19544075-19543678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 260
               

               
Conread position:
               
255-599
               

               
Cow position:
               
chr27:10992205-10992540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
151, 75
               

               
Conread position:
               
256-631
               

               
Cow position:
               
chr27:15319309-15319670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 21
               

               
Conread position:
               
256-644
               

               
Cow position:
               
chr27:8430589-8430208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 82
               

               
Conread position:
               
257-630
               

               
Cow position:
               
chr27:15866069-15866438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
195, 80
               

               
Conread position:
               
258-624
               

               
Cow position:
               
chr27:1122883-1123232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
132, 78
               

               
Conread position:
               
259-472
               

               
Cow position:
               
chr27:26407307-26407099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
259-493
               

               
Cow position:
               
chr27:20497058-20497302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
259-602
               

               
Cow position:
               
chr27:18593125-18593460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 71
               

               
Conread position:
               
259-635
               

               
Cow position:
               
chr27:21669265-21668903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
218, 119
               

               
Conread position:
               
263-607
               

               
Cow position:
               
chr27:26807709-26807369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
94, 144
               

               
Conread position:
               
264-566
               

               
Cow position:
               
chr27:7731400-7731095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
115, 241
               

               
Conread position:
               
264-590
               

               
Cow position:
               
chr27:9169782-9169467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
264-630
               

               
Cow position:
               
chr27:30354487-30354128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
143, 233
               

               
Conread position:
               
266-644
               

               
Cow position:
               
chr27:19577534-19577905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
113, 62
               

               
Conread position:
               
268-445
               

               
Cow position:
               
chr27:17646307-17646128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
270-636
               

               
Cow position:
               
chr27:15271783-15272129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
194, 112
               

               
Conread position:
               
271-489
               

               
Cow position:
               
chr27:16625764-16625982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
125, 59
               

               
Conread position:
               
272-630
               

               
Cow position:
               
chr27:5932767-5932419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
250, 78
               

               
Conread position:
               
273-568
               

               
Cow position:
               
chr27:13841235-13841532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
126, 240
               

               
Conread position:
               
273-636
               

               
Cow position:
               
chr27:15871027-15871385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
145, 117
               

               
Conread position:
               
273-641
               

               
Cow position:
               
chr27:21408697-21408324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
117, 211
               

               
Conread position:
               
273-646
               

               
Cow position:
               
chr27:13639117-13638759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
205, 85
               

               
Conread position:
               
279-636
               

               
Cow position:
               
chr27:27844130-27843769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
280-463
               

               
Cow position:
               
chr27:4155869-4156059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
280-493
               

               
Cow position:
               
chr27:4858766-4858558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
107, 150
               

               
Conread position:
               
280-497
               

               
Cow position:
               
chr27:30672685-30672471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
201, 112
               

               
Conread position:
               
280-560
               

               
Cow position:
               
chr27:28467577-28467291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
114, 56
               

               
Conread position:
               
280-568
               

               
Cow position:
               
chr27:6159854-6160137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
117, 6
               

               
Conread position:
               
280-620
               

               
Cow position:
               
chr27:1498188-1498521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
281-493
               

               
Cow position:
               
chr27:715375-715591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
117, 83
               

               
Conread position:
               
282-484
               

               
Cow position:
               
chr27:21975928-21976128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
188, 115
               

               
Conread position:
               
282-655
               

               
Cow position:
               
chr27:4813008-4812634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
108, 218
               

               
Conread position:
               
284-636
               

               
Cow position:
               
chr27:25379865-25380214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 218
               

               
Conread position:
               
285-600
               

               
Cow position:
               
chr27:27245476-27245164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
94, 124
               

               
Conread position:
               
286-628
               

               
Cow position:
               
chr27:706832-707162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
288-630
               

               
Cow position:
               
chr27:2930707-2930379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
184, 75
               

               
Conread position:
               
289-636
               

               
Cow position:
               
chr27:815244-815588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
51, 212
               

               
Conread position:
               
290-479
               

               
Cow position:
               
chr27:20247921-20247734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 47
               

               
Conread position:
               
296-626
               

               
Cow position:
               
chr27:21351132-21350802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
296-630
               

               
Cow position:
               
chr27:9090901-9090584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 33
               

               
Conread position:
               
296-630
               

               
Cow position:
               
chr27:12429296-12429625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
48, 88
               

               
Conread position:
               
298-593
               

               
Cow position:
               
chr27:6051989-6052280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
108, 5
               

               
Conread position:
               
299-626
               

               
Cow position:
               
chr27:11081093-11081409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
172, 53
               

               
Conread position:
               
299-626
               

               
Cow position:
               
chr27:11536213-11535884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
91, 166
               

               
Conread position:
               
299-630
               

               
Cow position:
               
chr27:15204337-15204014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
100, 119
               

               
Conread position:
               
299-630
               

               
Cow position:
               
chr27:26218594-26218912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
299-636
               

               
Cow position:
               
chr27:30362147-30362466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 5
               

               
Conread position:
               
300-636
               

               
Cow position:
               
chr27:22426939-22426607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
106, 85
               

               
Conread position:
               
303-493
               

               
Cow position:
               
chr27:20789483-20789289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 134
               

               
Conread position:
               
311-626
               

               
Cow position:
               
chr27:4983701-4983388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
169, 178
               

               
Conread position:
               
311-630
               

               
Cow position:
               
chr27:11815843-11815542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
314-629
               

               
Cow position:
               
chr27:24999833-24999518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
86, 76
               

               
Conread position:
               
319-630
               

               
Cow position:
               
chr27:26786078-26785763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
80, 222
               

               
Conread position:
               
327-626
               

               
Cow position:
               
chr27:13354515-13354218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
141, 162
               

               
Conread position:
               
330-634
               

               
Cow position:
               
chr27:27040525-27040830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
66, 180
               

               
Conread position:
               
332-625
               

               
Cow position:
               
chr27:1675295-1675582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
207, 140
               

               
Conread position:
               
332-628
               

               
Cow position:
               
chr27:2683220-2682928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
57, 172
               

               
Conread position:
               
334-479
               

               
Cow position:
               
chr27:6350913-6350764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 101
               

               
Conread position:
               
334-630
               

               
Cow position:
               
chr27:23070432-23070143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
62, 142
               

               
Conread position:
               
335-630
               

               
Cow position:
               
chr27:4664406-4664687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 120
               

               
Conread position:
               
337-616
               

               
Cow position:
               
chr27:911152-910882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
202, 56
               

               
Conread position:
               
338-497
               

               
Cow position:
               
chr27:7538146-7537981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
338-630
               

               
Cow position:
               
chr27:11412659-11412933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
338-632
               

               
Cow position:
               
chr27:21569909-21569625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
133, 56
               

               
Conread position:
               
338-644
               

               
Cow position:
               
chr27:6522975-6523277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 56
               

               
Conread position:
               
339-504
               

               
Cow position:
               
chr27:26135069-26135237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 151
               

               
Conread position:
               
339-634
               

               
Cow position:
               
chr27:732505-732791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
200, 13
               

               
Conread position:
               
340-601
               

               
Cow position:
               
chr27:29283475-29283220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 50
               

               
Conread position:
               
341-493
               

               
Cow position:
               
chr27:20570053-20570210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
341-631
               

               
Cow position:
               
chr27:14902719-14902431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 169
               

               
Conread position:
               
344-595
               

               
Cow position:
               
chr27:27550797-27550565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
344-637
               

               
Cow position:
               
chr27:16871978-16871695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
345-626
               

               
Cow position:
               
chr27:6058441-6058715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
346-628
               

               
Cow position:
               
chr27:27259553-27259823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
132, 51
               

               
Conread position:
               
347-568
               

               
Cow position:
               
chr27:22268441-22268660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 150
               

               
Conread position:
               
347-601
               

               
Cow position:
               
chr27:31499010-31499256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 32
               

               
Conread position:
               
347-603
               

               
Cow position:
               
chr27:20127083-20126836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
133, 63
               

               
Conread position:
               
347-630
               

               
Cow position:
               
chr27:28038399-28038120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
349-466
               

               
Cow position:
               
chr27:23758367-23758252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
350-528
               

               
Cow position:
               
chr27:4011622-4011797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
122, 44
               

               
Conread position:
               
350-624
               

               
Cow position:
               
chr27:1183941-1183665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 113
               

               
Conread position:
               
350-636
               

               
Cow position:
               
chr27:31147726-31147450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
351-602
               

               
Cow position:
               
chr27:30670684-30670927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
351-617
               

               
Cow position:
               
chr27:29250824-29251084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
354-637
               

               
Cow position:
               
chr27:30417628-30417898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
357-634
               

               
Cow position:
               
chr27:25790754-25791025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 41
               

               
Conread position:
               
360-626
               

               
Cow position:
               
chr27:26398305-26398046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
369-619
               

               
Cow position:
               
chr27:18215014-18215262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 69
               

               
Conread position:
               
379-585
               

               
Cow position:
               
chr27:24357232-24357438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
385-616
               

               
Cow position:
               
chr27:27055553-27055781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
385-626
               

               
Cow position:
               
chr27:29399795-29400030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
389-633
               

               
Cow position:
               
chr27:30560897-30561132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
390-607
               

               
Cow position:
               
chr27:6037107-6037316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
394-630
               

               
Cow position:
               
chr27:12231923-12231693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
396-629
               

               
Cow position:
               
chr27:15859097-15858875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
397-636
               

               
Cow position:
               
chr27:30177585-30177351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 86
               

               
Conread position:
               
398-553
               

               
Cow position:
               
chr27:18948604-18948450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
398-568
               

               
Cow position:
               
chr27:18434478-18434315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 43
               

               
Conread position:
               
398-609
               

               
Cow position:
               
chr27:20591973-20592180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 97
               

               
Conread position:
               
398-622
               

               
Cow position:
               
chr27:13197912-13198125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
398-631
               

               
Cow position:
               
chr27:27684128-27683899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
398-651
               

               
Cow position:
               
chr27:22498549-22498791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 90
               

               
Conread position:
               
399-633
               

               
Cow position:
               
chr27:26224280-26224049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 103
               

               
Conread position:
               
400-623
               

               
Cow position:
               
chr27:25411526-25411309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
405-616
               

               
Cow position:
               
chr27:26625130-26625329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
409-626
               

               
Cow position:
               
chr27:1903062-1903277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 64
               

               
Conread position:
               
409-630
               

               
Cow position:
               
chr27:22771754-22771975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
68, 102
               

               
Conread position:
               
413-626
               

               
Cow position:
               
chr27:16619995-16620204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
417-634
               

               
Cow position:
               
chr27:28164395-28164190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
422-630
               

               
Cow position:
               
chr27:13410158-13409951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
425-653
               

               
Cow position:
               
chr27:22179775-22179560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
439-644
               

               
Cow position:
               
chr27:31217135-31216932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 64
               
Show alignments to all cow chromosomes.