Cow genome map
| Conread name: | Ova1-OVRM10100E09 |
| Conread position: | 3-218 |
| Cow position: | chr10:14947226-14947433 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 3-226 |
| Cow position: | chr10:30369858-30369639 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 86, 101 |
| Conread position: | 4-210 |
| Cow position: | chr10:2857013-2857219 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 188, 74 |
| Conread position: | 4-213 |
| Cow position: | chr10:443549-443747 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 106, 50 |
| Conread position: | 4-213 |
| Cow position: | chr10:35731559-35731353 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 4-213 |
| Cow position: | chr10:37068447-37068246 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-213 |
| Cow position: | chr10:41676446-41676240 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 88 |
| Conread position: | 4-213 |
| Cow position: | chr10:61509978-61509772 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 4-214 |
| Cow position: | chr10:35245981-35245777 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 4-214 |
| Cow position: | chr10:40163968-40163758 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 93, 100 |
| Conread position: | 4-217 |
| Cow position: | chr10:23346337-23346128 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 4-217 |
| Cow position: | chr10:61922175-61921964 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 107, 50 |
| Conread position: | 4-218 |
| Cow position: | chr10:9576083-9575869 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 90, 100 |
| Conread position: | 4-218 |
| Cow position: | chr10:9656557-9656344 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 107, 82 |
| Conread position: | 4-218 |
| Cow position: | chr10:22390562-22390777 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 82, 87 |
| Conread position: | 4-218 |
| Cow position: | chr10:24756377-24756589 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 206, 175 |
| Conread position: | 4-218 |
| Cow position: | chr10:46327656-46327869 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 4-218 |
| Cow position: | chr10:57786304-57786516 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 4-222 |
| Cow position: | chr10:34655145-34654927 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 130 |
| Conread position: | 4-225 |
| Cow position: | chr10:55396011-55395792 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 4-228 |
| Cow position: | chr10:60697658-60697439 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-229 |
| Cow position: | chr10:38205745-38205526 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 4-229 |
| Cow position: | chr10:51944329-51944548 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-232 |
| Cow position: | chr10:23311062-23310833 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 107, 54 |
| Conread position: | 4-234 |
| Cow position: | chr10:33665808-33666040 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 128, 139 |
| Conread position: | 4-234 |
| Cow position: | chr10:36531764-36531529 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 4-258 |
| Cow position: | chr10:6384496-6384746 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 107, 96 |
| Conread position: | 4-266 |
| Cow position: | chr10:2613334-2613596 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 90, 65 |
| Conread position: | 4-269 |
| Cow position: | chr10:19191725-19191987 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 203, 52 |
| Conread position: | 4-293 |
| Cow position: | chr10:58044166-58043869 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 53, 42 |
| Conread position: | 5-221 |
| Cow position: | chr10:17149846-17150054 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 6-208 |
| Cow position: | chr10:52695759-52695557 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 105, 97 |
| Conread position: | 6-214 |
| Cow position: | chr10:43586317-43586108 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 122, 112 |
| Conread position: | 6-259 |
| Cow position: | chr10:46195753-46196002 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 204, 47 |
| Conread position: | 7-213 |
| Cow position: | chr10:10148617-10148825 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 7-214 |
| Cow position: | chr10:50558956-50558754 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 7-220 |
| Cow position: | chr10:13765196-13764983 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 104, 96 |
| Conread position: | 7-230 |
| Cow position: | chr10:10152978-10153197 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 7-251 |
| Cow position: | chr10:16414599-16414359 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 124, 33 |
| Conread position: | 8-214 |
| Cow position: | chr10:6489841-6490054 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 103, 95 |
| Conread position: | 8-214 |
| Cow position: | chr10:10027544-10027750 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 78, 48 |
| Conread position: | 8-217 |
| Cow position: | chr10:20095730-20095946 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 8-231 |
| Cow position: | chr10:34646477-34646263 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 8-245 |
| Cow position: | chr10:31027674-31027432 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 9-215 |
| Cow position: | chr10:1978701-1978495 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-221 |
| Cow position: | chr10:10829021-10829224 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 103, 47 |
| Conread position: | 18-213 |
| Cow position: | chr10:3275954-3276143 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 18-257 |
| Cow position: | chr10:40998835-40999076 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 26-226 |
| Cow position: | chr10:14188623-14188423 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 172, 79 |
| Conread position: | 55-263 |
| Cow position: | chr10:52296511-52296724 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 56, 48 |
| Conread position: | 56-226 |
| Cow position: | chr10:16641914-16641741 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 56-234 |
| Cow position: | chr10:11966830-11966648 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 71 |
| Conread position: | 56-251 |
| Cow position: | chr10:55069226-55069419 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 53 |
| Conread position: | 56-254 |
| Cow position: | chr10:39124150-39124353 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 56-304 |
| Cow position: | chr10:3985907-3986158 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 63-217 |
| Cow position: | chr10:10104805-10104958 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 63-219 |
| Cow position: | chr10:25475557-25475713 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 66-226 |
| Cow position: | chr10:14668425-14668586 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.