Cow genome map
| Conread name: | Ova1-OVRM10100E09 |
| Conread position: | 1-229 |
| Cow position: | chr16:20824464-20824693 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 103 |
| Conread position: | 3-206 |
| Cow position: | chr16:38708848-38708643 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 27 |
| Conread position: | 3-209 |
| Cow position: | chr16:48095776-48095573 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 3-214 |
| Cow position: | chr16:48956785-48957000 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 3-215 |
| Cow position: | chr16:7418368-7418575 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 4-201 |
| Cow position: | chr16:33646005-33646203 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 4-211 |
| Cow position: | chr16:3047349-3047144 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 178, 54 |
| Conread position: | 4-211 |
| Cow position: | chr16:4275749-4275544 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 178, 54 |
| Conread position: | 4-212 |
| Cow position: | chr16:33704798-33705001 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 127, 9 |
| Conread position: | 4-213 |
| Cow position: | chr16:9553049-9553249 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 34 |
| Conread position: | 4-213 |
| Cow position: | chr16:11584414-11584207 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 4-214 |
| Cow position: | chr16:14242361-14242569 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 33 |
| Conread position: | 4-214 |
| Cow position: | chr16:46433337-46433123 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 4-217 |
| Cow position: | chr16:12324445-12324658 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 100 |
| Conread position: | 4-217 |
| Cow position: | chr16:54579157-54579369 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 4-218 |
| Cow position: | chr16:51500922-51501133 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 4-221 |
| Cow position: | chr16:25839610-25839818 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 4-221 |
| Cow position: | chr16:52275139-52274927 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 99 |
| Conread position: | 4-222 |
| Cow position: | chr16:48398264-48398049 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 4-225 |
| Cow position: | chr16:14376772-14376993 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 50 |
| Conread position: | 4-225 |
| Cow position: | chr16:42078857-42078636 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 104, 54 |
| Conread position: | 4-225 |
| Cow position: | chr16:55233674-55233888 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-226 |
| Cow position: | chr16:56358294-56358072 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 4-227 |
| Cow position: | chr16:31484672-31484452 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 101 |
| Conread position: | 4-228 |
| Cow position: | chr16:40514492-40514280 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 107, 96 |
| Conread position: | 4-230 |
| Cow position: | chr16:45294534-45294762 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 160 |
| Conread position: | 4-232 |
| Cow position: | chr16:45677968-45678196 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 94, 100 |
| Conread position: | 4-233 |
| Cow position: | chr16:7136355-7136125 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 4-247 |
| Cow position: | chr16:31149368-31149611 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 215, 71 |
| Conread position: | 4-252 |
| Cow position: | chr16:40446252-40446508 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 43 |
| Conread position: | 4-258 |
| Cow position: | chr16:26649639-26649388 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 107, 96 |
| Conread position: | 4-275 |
| Cow position: | chr16:8738055-8738331 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 5-213 |
| Cow position: | chr16:11134990-11134785 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 6-261 |
| Cow position: | chr16:1582934-1582680 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 114, 174 |
| Conread position: | 7-291 |
| Cow position: | chr16:12320214-12320495 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 117, 212 |
| Conread position: | 8-201 |
| Cow position: | chr16:34205070-34204877 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-209 |
| Cow position: | chr16:48613481-48613282 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-277 |
| Cow position: | chr16:16025435-16025714 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 79, 91 |
| Conread position: | 17-194 |
| Cow position: | chr16:39385494-39385670 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 18-234 |
| Cow position: | chr16:19478761-19478545 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 82 |
| Conread position: | 20-230 |
| Cow position: | chr16:7928379-7928164 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 66 |
| Conread position: | 56-210 |
| Cow position: | chr16:3938969-3938815 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 48 |
| Conread position: | 56-230 |
| Cow position: | chr16:5396775-5396599 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 56-271 |
| Cow position: | chr16:31011369-31011584 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 62, 162 |
Show alignments to all cow chromosomes.