Cow genome map
| Conread name: | Ova1-OVRM10100E09 |
| Conread position: | 2-257 |
| Cow position: | chr18:51405952-51405707 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 112, 87 |
| Conread position: | 3-219 |
| Cow position: | chr18:51383440-51383226 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 3-232 |
| Cow position: | chr18:15517216-15516991 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 3-267 |
| Cow position: | chr18:42293100-42292842 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 94 |
| Conread position: | 4-129 |
| Cow position: | chr18:23505287-23505412 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 96 |
| Conread position: | 4-209 |
| Cow position: | chr18:9365875-9366084 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 4-211 |
| Cow position: | chr18:35535190-35534986 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 90, 100 |
| Conread position: | 4-213 |
| Cow position: | chr18:22569110-22568902 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 107, 96 |
| Conread position: | 4-213 |
| Cow position: | chr18:29648740-29648946 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 4-213 |
| Cow position: | chr18:49038418-49038620 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 4-214 |
| Cow position: | chr18:44917713-44917921 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 148, 128 |
| Conread position: | 4-217 |
| Cow position: | chr18:31082392-31082173 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 106, 96 |
| Conread position: | 4-217 |
| Cow position: | chr18:38937778-38937990 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-218 |
| Cow position: | chr18:45558103-45558314 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 132 |
| Conread position: | 4-222 |
| Cow position: | chr18:3180367-3180585 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 101 |
| Conread position: | 4-222 |
| Cow position: | chr18:10904806-10905024 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 207, 99 |
| Conread position: | 4-226 |
| Cow position: | chr18:9040752-9040523 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 96 |
| Conread position: | 4-226 |
| Cow position: | chr18:12117892-12117674 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 4-226 |
| Cow position: | chr18:23630648-23630436 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-228 |
| Cow position: | chr18:4884561-4884338 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 142, 60 |
| Conread position: | 4-228 |
| Cow position: | chr18:9974372-9974149 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 79, 87 |
| Conread position: | 4-229 |
| Cow position: | chr18:11691452-11691225 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 120, 63 |
| Conread position: | 4-229 |
| Cow position: | chr18:48713507-48713724 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 41 |
| Conread position: | 4-230 |
| Cow position: | chr18:43796999-43796777 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 4-231 |
| Cow position: | chr18:50632486-50632261 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 4-233 |
| Cow position: | chr18:44262587-44262808 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 39 |
| Conread position: | 4-234 |
| Cow position: | chr18:42432136-42431901 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 130 |
| Conread position: | 4-240 |
| Cow position: | chr18:45903938-45903704 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 140, 49 |
| Conread position: | 4-247 |
| Cow position: | chr18:10977254-10977014 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 206, 54 |
| Conread position: | 4-248 |
| Cow position: | chr18:1571279-1571036 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 90, 33 |
| Conread position: | 4-259 |
| Cow position: | chr18:55119828-55120079 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 103 |
| Conread position: | 5-213 |
| Cow position: | chr18:12113407-12113202 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 5-236 |
| Cow position: | chr18:11790882-11791106 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 6-227 |
| Cow position: | chr18:11779611-11779830 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 125, 193 |
| Conread position: | 6-267 |
| Cow position: | chr18:15809842-15809590 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 250, 53 |
| Conread position: | 7-217 |
| Cow position: | chr18:47824810-47824604 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 11-214 |
| Cow position: | chr18:8171122-8170924 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 13-222 |
| Cow position: | chr18:9010673-9010880 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 98, 87 |
| Conread position: | 15-234 |
| Cow position: | chr18:39811616-39811394 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 82 |
| Conread position: | 18-258 |
| Cow position: | chr18:2794001-2793766 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 20-226 |
| Cow position: | chr18:49603071-49602862 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 72, 84 |
| Conread position: | 56-218 |
| Cow position: | chr18:50004697-50004535 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 56-228 |
| Cow position: | chr18:22790080-22789910 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 57-217 |
| Cow position: | chr18:49440850-49441013 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 63-235 |
| Cow position: | chr18:21528662-21528838 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 23 |
Show alignments to all cow chromosomes.