Cow genome map
| Conread name: | Ova1-OVRM10100E09 |
| Conread position: | 1-223 |
| Cow position: | chr2:17805775-17805558 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 122, 75 |
| Conread position: | 1-236 |
| Cow position: | chr2:60091446-60091212 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 94, 103 |
| Conread position: | 3-202 |
| Cow position: | chr2:69350576-69350379 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 3-213 |
| Cow position: | chr2:46351793-46351583 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 114, 100 |
| Conread position: | 3-286 |
| Cow position: | chr2:41452223-41452511 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 126, 15 |
| Conread position: | 4-178 |
| Cow position: | chr2:1762785-1762956 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 4-202 |
| Cow position: | chr2:17492526-17492330 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-202 |
| Cow position: | chr2:45542409-45542213 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 4-211 |
| Cow position: | chr2:38640313-38640516 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 4-213 |
| Cow position: | chr2:45619399-45619197 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 4-213 |
| Cow position: | chr2:46189106-46188897 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-213 |
| Cow position: | chr2:82116080-82116286 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 4-214 |
| Cow position: | chr2:19494204-19494415 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 4-214 |
| Cow position: | chr2:29121873-29122085 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 132, 60 |
| Conread position: | 4-214 |
| Cow position: | chr2:61562037-61561830 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 138, 57 |
| Conread position: | 4-217 |
| Cow position: | chr2:28330757-28330547 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 4-217 |
| Cow position: | chr2:40703676-40703467 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 4-218 |
| Cow position: | chr2:387786-387571 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 4-218 |
| Cow position: | chr2:45596973-45597183 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 82, 45 |
| Conread position: | 4-220 |
| Cow position: | chr2:994375-994164 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 207, 140 |
| Conread position: | 4-222 |
| Cow position: | chr2:45499212-45498994 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-226 |
| Cow position: | chr2:18621400-18621624 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 133 |
| Conread position: | 4-226 |
| Cow position: | chr2:40373408-40373195 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 4-229 |
| Cow position: | chr2:82957668-82957898 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 4-230 |
| Cow position: | chr2:62744018-62743793 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 96, 54 |
| Conread position: | 4-230 |
| Cow position: | chr2:84480511-84480282 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 4-231 |
| Cow position: | chr2:46161947-46162171 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 211, 130 |
| Conread position: | 4-233 |
| Cow position: | chr2:14634174-14634402 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 4-233 |
| Cow position: | chr2:33554180-33553958 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 96 |
| Conread position: | 4-234 |
| Cow position: | chr2:11599415-11599641 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-234 |
| Cow position: | chr2:37619924-37619688 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 146, 114 |
| Conread position: | 4-234 |
| Cow position: | chr2:40257422-40257194 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 204, 131 |
| Conread position: | 4-234 |
| Cow position: | chr2:47879231-47879455 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 4-235 |
| Cow position: | chr2:44051301-44051530 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 140, 50 |
| Conread position: | 4-248 |
| Cow position: | chr2:43591383-43591140 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 53, 71 |
| Conread position: | 4-263 |
| Cow position: | chr2:79968-79705 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 207, 127 |
| Conread position: | 5-218 |
| Cow position: | chr2:992146-992357 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 109, 135 |
| Conread position: | 6-199 |
| Cow position: | chr2:35948687-35948495 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 6-205 |
| Cow position: | chr2:51099983-51099782 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 83, 98 |
| Conread position: | 6-209 |
| Cow position: | chr2:42801032-42801231 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 6-209 |
| Cow position: | chr2:45642493-45642297 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 6-212 |
| Cow position: | chr2:39334881-39334675 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 6-212 |
| Cow position: | chr2:46968197-46967999 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 6-217 |
| Cow position: | chr2:50449918-50449706 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 6-218 |
| Cow position: | chr2:13001791-13002001 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 115, 50 |
| Conread position: | 6-226 |
| Cow position: | chr2:1476402-1476621 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 102, 48 |
| Conread position: | 6-226 |
| Cow position: | chr2:41248563-41248778 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 6-228 |
| Cow position: | chr2:19137898-19137677 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 6-233 |
| Cow position: | chr2:46033327-46033557 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 115, 174 |
| Conread position: | 7-218 |
| Cow position: | chr2:46164507-46164297 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 7-225 |
| Cow position: | chr2:71437385-71437165 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 7-234 |
| Cow position: | chr2:39566701-39566474 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 85, 98 |
| Conread position: | 7-249 |
| Cow position: | chr2:18997712-18997954 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 212, 128 |
| Conread position: | 8-201 |
| Cow position: | chr2:59819813-59819624 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 8-222 |
| Cow position: | chr2:41462430-41462216 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 102, 90 |
| Conread position: | 8-224 |
| Cow position: | chr2:20947366-20947580 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 210, 114 |
| Conread position: | 20-213 |
| Cow position: | chr2:4207562-4207369 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-226 |
| Cow position: | chr2:75462344-75462535 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 55-235 |
| Cow position: | chr2:47018886-47019064 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 146 |
| Conread position: | 56-222 |
| Cow position: | chr2:63568752-63568918 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-227 |
| Cow position: | chr2:46312482-46312649 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 56-281 |
| Cow position: | chr2:3773285-3773059 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 185 |
| Conread position: | 61-213 |
| Cow position: | chr2:43994983-43995130 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 36 |
| Conread position: | 63-233 |
| Cow position: | chr2:6952517-6952684 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 66-274 |
| Cow position: | chr2:48785007-48784798 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 37 |
| Conread position: | 69-232 |
| Cow position: | chr2:39187426-39187588 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 75-226 |
| Cow position: | chr2:68239264-68239414 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.