Cow genome map
| Conread name: | Ova1-OVRM10100E09 |
| Conread position: | 1-230 |
| Cow position: | chr22:43397985-43398212 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 148, 96 |
| Conread position: | 3-209 |
| Cow position: | chr22:14141357-14141149 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 83, 101 |
| Conread position: | 3-217 |
| Cow position: | chr22:16094918-16094706 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 120, 92 |
| Conread position: | 3-234 |
| Cow position: | chr22:15950398-15950174 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 3-247 |
| Cow position: | chr22:17652420-17652659 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 4-202 |
| Cow position: | chr22:40789552-40789742 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 4-211 |
| Cow position: | chr22:34441647-34441439 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 80 |
| Conread position: | 4-212 |
| Cow position: | chr22:12902861-12902661 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 4-213 |
| Cow position: | chr22:6176299-6176086 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 28 |
| Conread position: | 4-213 |
| Cow position: | chr22:16813784-16813991 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 4-214 |
| Cow position: | chr22:16541666-16541452 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 111, 89 |
| Conread position: | 4-214 |
| Cow position: | chr22:25809290-25809084 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 70 |
| Conread position: | 4-218 |
| Cow position: | chr22:4657057-4656844 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 93 |
| Conread position: | 4-221 |
| Cow position: | chr22:33948987-33948774 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 31, 74 |
| Conread position: | 4-222 |
| Cow position: | chr22:4163965-4164184 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 138, 35 |
| Conread position: | 4-224 |
| Cow position: | chr22:7584250-7584035 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 206, 50 |
| Conread position: | 4-225 |
| Cow position: | chr22:13957658-13957437 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-226 |
| Cow position: | chr22:5616288-5616505 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 207, 93 |
| Conread position: | 4-227 |
| Cow position: | chr22:4060961-4060738 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-230 |
| Cow position: | chr22:22613092-22613316 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 212, 96 |
| Conread position: | 4-232 |
| Cow position: | chr22:17852648-17852424 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 4-234 |
| Cow position: | chr22:30998872-30999106 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 120, 177 |
| Conread position: | 4-235 |
| Cow position: | chr22:6721092-6720864 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 127, 50 |
| Conread position: | 4-249 |
| Cow position: | chr22:10161953-10162200 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 164 |
| Conread position: | 4-256 |
| Cow position: | chr22:7497124-7496873 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 82, 101 |
| Conread position: | 4-276 |
| Cow position: | chr22:42635446-42635169 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 125, 99 |
| Conread position: | 4-293 |
| Cow position: | chr22:9372507-9372804 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 82 |
| Conread position: | 5-213 |
| Cow position: | chr22:30818200-30818405 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 6-217 |
| Cow position: | chr22:44717704-44717920 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 6-222 |
| Cow position: | chr22:12315799-12316013 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 201, 72 |
| Conread position: | 6-224 |
| Cow position: | chr22:17152665-17152897 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 7-217 |
| Cow position: | chr22:30697140-30697348 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 79, 98 |
| Conread position: | 7-218 |
| Cow position: | chr22:2109638-2109428 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 203, 132 |
| Conread position: | 7-234 |
| Cow position: | chr22:15568027-15567806 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 97 |
| Conread position: | 8-243 |
| Cow position: | chr22:18259212-18259443 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 103, 46 |
| Conread position: | 8-279 |
| Cow position: | chr22:3251004-3250720 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 124, 255 |
| Conread position: | 9-217 |
| Cow position: | chr22:26233623-26233833 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 13-233 |
| Cow position: | chr22:8327741-8327958 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 157, 65 |
| Conread position: | 20-249 |
| Cow position: | chr22:23630349-23630124 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 58 |
| Conread position: | 26-230 |
| Cow position: | chr22:43965708-43965916 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 53-238 |
| Cow position: | chr22:11049352-11049534 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 56-214 |
| Cow position: | chr22:9735307-9735465 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-230 |
| Cow position: | chr22:30684766-30684936 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 56-278 |
| Cow position: | chr22:3257624-3257406 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 58-214 |
| Cow position: | chr22:24890261-24890417 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 60-226 |
| Cow position: | chr22:12207664-12207499 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 75-213 |
| Cow position: | chr22:29546696-29546833 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 109-272 |
| Cow position: | chr22:21527003-21527164 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.