Cow genome map
| Conread name: | Ova1-OVRM10100E09 |
| Conread position: | 3-211 |
| Cow position: | chr4:17186368-17186159 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 140, 15 |
| Conread position: | 3-221 |
| Cow position: | chr4:386411-386195 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 136, 53 |
| Conread position: | 3-226 |
| Cow position: | chr4:18099081-18098859 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 128, 213 |
| Conread position: | 3-236 |
| Cow position: | chr4:85676-85906 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 104, 10 |
| Conread position: | 4-209 |
| Cow position: | chr4:52832034-52831828 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 122, 34 |
| Conread position: | 4-211 |
| Cow position: | chr4:37915353-37915149 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 4-212 |
| Cow position: | chr4:33838818-33838613 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-212 |
| Cow position: | chr4:48485976-48486186 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 4-213 |
| Cow position: | chr4:21161087-21161296 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 100 |
| Conread position: | 4-213 |
| Cow position: | chr4:36290606-36290813 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 4-213 |
| Cow position: | chr4:68590759-68590960 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 4-214 |
| Cow position: | chr4:3687904-3688121 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 81, 138 |
| Conread position: | 4-218 |
| Cow position: | chr4:8182658-8182438 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 193 |
| Conread position: | 4-218 |
| Cow position: | chr4:21874157-21874374 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 107, 95 |
| Conread position: | 4-218 |
| Cow position: | chr4:38935341-38935554 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 119, 99 |
| Conread position: | 4-218 |
| Cow position: | chr4:67393073-67393291 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 90, 108 |
| Conread position: | 4-223 |
| Cow position: | chr4:20147165-20147386 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 106, 94 |
| Conread position: | 4-225 |
| Cow position: | chr4:10558518-10558739 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 122, 176 |
| Conread position: | 4-226 |
| Cow position: | chr4:51851188-51851417 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 4-230 |
| Cow position: | chr4:38209993-38209768 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 220, 0 |
| Conread position: | 4-236 |
| Cow position: | chr4:40414646-40414410 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 4-259 |
| Cow position: | chr4:28772085-28771830 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 211, 129 |
| Conread position: | 4-267 |
| Cow position: | chr4:44903276-44903530 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 227, 44 |
| Conread position: | 5-213 |
| Cow position: | chr4:59002156-59001947 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 53 |
| Conread position: | 5-224 |
| Cow position: | chr4:56239877-56239662 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 92 |
| Conread position: | 5-235 |
| Cow position: | chr4:69290760-69290527 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 93, 99 |
| Conread position: | 6-218 |
| Cow position: | chr4:19333370-19333579 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 6-242 |
| Cow position: | chr4:19119001-19119236 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 117, 207 |
| Conread position: | 6-250 |
| Cow position: | chr4:60527164-60527409 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 80, 98 |
| Conread position: | 6-257 |
| Cow position: | chr4:18951957-18952213 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 117, 225 |
| Conread position: | 8-269 |
| Cow position: | chr4:20027117-20026851 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 113, 92 |
| Conread position: | 10-233 |
| Cow position: | chr4:31177812-31178035 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 100, 83 |
| Conread position: | 19-250 |
| Cow position: | chr4:37991589-37991817 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 159, 35 |
| Conread position: | 20-230 |
| Cow position: | chr4:63078220-63078435 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 92, 74 |
| Conread position: | 23-211 |
| Cow position: | chr4:42374155-42373966 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 30-233 |
| Cow position: | chr4:22071664-22071463 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 69, 152 |
| Conread position: | 55-222 |
| Cow position: | chr4:54785896-54785730 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 126, 79 |
| Conread position: | 55-233 |
| Cow position: | chr4:30943987-30944165 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 56-213 |
| Cow position: | chr4:51083304-51083149 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 126, 62 |
| Conread position: | 56-220 |
| Cow position: | chr4:38940909-38940744 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 75, 53 |
| Conread position: | 56-222 |
| Cow position: | chr4:28660517-28660346 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 56-254 |
| Cow position: | chr4:56410379-56410576 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 48 |
| Conread position: | 57-308 |
| Cow position: | chr4:58045601-58045350 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 58-230 |
| Cow position: | chr4:27657012-27657180 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 63-279 |
| Cow position: | chr4:4320950-4320741 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 64-256 |
| Cow position: | chr4:30769077-30769268 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 14 |
Show alignments to all cow chromosomes.