Cow genome map
Conread name: | Ova1-OVRM10100E09 |
Conread position: | 3-213 |
Cow position: | chr5:45845677-45845464 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 147 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 3-245 |
Cow position: | chr5:36038988-36038748 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 161 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 12, 62 |
Conread position: | 4-193 |
Cow position: | chr5:46704284-46704094 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 129 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 4-205 |
Cow position: | chr5:50600062-50600264 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 149 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 4-211 |
Cow position: | chr5:30253756-30253964 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 141 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 120, 149 |
Conread position: | 4-213 |
Cow position: | chr5:12434558-12434761 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 143 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 4-213 |
Cow position: | chr5:56028524-56028319 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 145 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 88, 24 |
Conread position: | 4-214 |
Cow position: | chr5:41165103-41165309 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 144 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 103, 93 |
Conread position: | 4-215 |
Cow position: | chr5:30629144-30628925 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 151 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 69, 102 |
Conread position: | 4-217 |
Cow position: | chr5:3582575-3582785 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 141 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 4-218 |
Cow position: | chr5:55942364-55942148 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 147 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 138, 204 |
Conread position: | 4-218 |
Cow position: | chr5:65941235-65941019 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 149 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 141, 96 |
Conread position: | 4-221 |
Cow position: | chr5:22795232-22795440 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 154 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 82, 50 |
Conread position: | 4-221 |
Cow position: | chr5:56070874-56071091 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 157 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 117, 202 |
Conread position: | 4-226 |
Cow position: | chr5:21828883-21829103 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 156 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 90, 77 |
Conread position: | 4-226 |
Cow position: | chr5:30232923-30233149 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 154 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 126, 99 |
Conread position: | 4-229 |
Cow position: | chr5:57101507-57101286 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 152 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 106, 39 |
Conread position: | 4-230 |
Cow position: | chr5:50101361-50101134 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 156 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 52, 84 |
Conread position: | 4-234 |
Cow position: | chr5:4280461-4280693 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 159 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 28, 110 |
Conread position: | 4-234 |
Cow position: | chr5:57074316-57074090 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 152 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 122, 176 |
Conread position: | 4-235 |
Cow position: | chr5:52852986-52853217 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 157 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 109, 99 |
Conread position: | 4-235 |
Cow position: | chr5:69383270-69383500 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 155 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 219, 99 |
Conread position: | 4-241 |
Cow position: | chr5:56014746-56014977 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 162 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 107, 99 |
Conread position: | 4-245 |
Cow position: | chr5:46512753-46512508 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 172 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 107, 68 |
Conread position: | 4-249 |
Cow position: | chr5:69099735-69099980 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 169 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 117, 208 |
Conread position: | 4-271 |
Cow position: | chr5:2240974-2240706 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 174 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 148, 33 |
Conread position: | 4-292 |
Cow position: | chr5:15363897-15364177 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 196 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 214, 130 |
Conread position: | 5-218 |
Cow position: | chr5:59626955-59626741 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 153 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 116, 95 |
Conread position: | 6-230 |
Cow position: | chr5:44446848-44446631 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 154 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 211, 128 |
Conread position: | 6-244 |
Cow position: | chr5:50824609-50824841 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 160 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 207, 118 |
Conread position: | 7-221 |
Cow position: | chr5:9894105-9893891 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 145 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 122, 167 |
Conread position: | 7-235 |
Cow position: | chr5:26549122-26548895 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 154 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 8-211 |
Cow position: | chr5:40109512-40109708 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 140 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 8-214 |
Cow position: | chr5:33560715-33560511 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 143 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 78, 97 |
Conread position: | 8-218 |
Cow position: | chr5:21617477-21617686 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 149 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 100, 92 |
Conread position: | 9-218 |
Cow position: | chr5:20288243-20288028 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 151 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 112, 203 |
Conread position: | 13-214 |
Cow position: | chr5:35190134-35190333 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 136 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 125, 0 |
Conread position: | 16-208 |
Cow position: | chr5:22667098-22667291 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 130 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 18-213 |
Cow position: | chr5:17104882-17105071 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 148 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 80, 36 |
Conread position: | 18-213 |
Cow position: | chr5:34288221-34288028 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 137 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 104, 36 |
Conread position: | 55-243 |
Cow position: | chr5:9559487-9559672 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 138 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 43, 49 |
Conread position: | 56-214 |
Cow position: | chr5:34787641-34787799 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 115 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 56-222 |
Cow position: | chr5:37253496-37253658 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 119 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 56-225 |
Cow position: | chr5:49207260-49207091 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 122 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 125, 131 |
Conread position: | 56-225 |
Cow position: | chr5:57497357-57497188 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 119 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 56-231 |
Cow position: | chr5:51289527-51289356 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 127 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 159, 57 |
Conread position: | 56-232 |
Cow position: | chr5:34918413-34918587 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 123 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 58-214 |
Cow position: | chr5:21721401-21721249 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 53, 42 |
Conread position: | 63-214 |
Cow position: | chr5:58487449-58487600 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 29, 34 |
Conread position: | 63-243 |
Cow position: | chr5:19626652-19626829 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 127 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 148, 0 |
Conread position: | 64-226 |
Cow position: | chr5:26467703-26467866 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 120 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 46, 36 |
Conread position: | 64-230 |
Cow position: | chr5:47960186-47960020 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 122 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 149, 54 |
Conread position: | 69-233 |
Cow position: | chr5:6245583-6245418 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 118 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 159, 0 |
Show alignments to all cow chromosomes.