Cow genome map

Conread name: Ova1-OVRM10100E09

Conread position: 3-213
Cow position: chr5:45845677-45845464 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 3-245
Cow position: chr5:36038988-36038748 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 62

Conread position: 4-193
Cow position: chr5:46704284-46704094 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 4-205
Cow position: chr5:50600062-50600264 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 4-211
Cow position: chr5:30253756-30253964 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 120, 149

Conread position: 4-213
Cow position: chr5:12434558-12434761 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 130, 0

Conread position: 4-213
Cow position: chr5:56028524-56028319 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 24

Conread position: 4-214
Cow position: chr5:41165103-41165309 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 103, 93

Conread position: 4-215
Cow position: chr5:30629144-30628925 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 102

Conread position: 4-217
Cow position: chr5:3582575-3582785 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 126, 0

Conread position: 4-218
Cow position: chr5:55942364-55942148 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 138, 204

Conread position: 4-218
Cow position: chr5:65941235-65941019 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 141, 96

Conread position: 4-221
Cow position: chr5:22795232-22795440 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 50

Conread position: 4-221
Cow position: chr5:56070874-56071091 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 117, 202

Conread position: 4-226
Cow position: chr5:21828883-21829103 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 90, 77

Conread position: 4-226
Cow position: chr5:30232923-30233149 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 126, 99

Conread position: 4-229
Cow position: chr5:57101507-57101286 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 39

Conread position: 4-230
Cow position: chr5:50101361-50101134 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 84

Conread position: 4-234
Cow position: chr5:4280461-4280693 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 110

Conread position: 4-234
Cow position: chr5:57074316-57074090 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 152
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 122, 176

Conread position: 4-235
Cow position: chr5:52852986-52853217 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 109, 99

Conread position: 4-235
Cow position: chr5:69383270-69383500 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 219, 99

Conread position: 4-241
Cow position: chr5:56014746-56014977 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 99

Conread position: 4-245
Cow position: chr5:46512753-46512508 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 68

Conread position: 4-249
Cow position: chr5:69099735-69099980 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 117, 208

Conread position: 4-271
Cow position: chr5:2240974-2240706 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 174
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 148, 33

Conread position: 4-292
Cow position: chr5:15363897-15364177 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 214, 130

Conread position: 5-218
Cow position: chr5:59626955-59626741 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 116, 95

Conread position: 6-230
Cow position: chr5:44446848-44446631 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 211, 128

Conread position: 6-244
Cow position: chr5:50824609-50824841 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 207, 118

Conread position: 7-221
Cow position: chr5:9894105-9893891 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 122, 167

Conread position: 7-235
Cow position: chr5:26549122-26548895 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 0

Conread position: 8-211
Cow position: chr5:40109512-40109708 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 8-214
Cow position: chr5:33560715-33560511 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 97

Conread position: 8-218
Cow position: chr5:21617477-21617686 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 100, 92

Conread position: 9-218
Cow position: chr5:20288243-20288028 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 112, 203

Conread position: 13-214
Cow position: chr5:35190134-35190333 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 16-208
Cow position: chr5:22667098-22667291 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 18-213
Cow position: chr5:17104882-17105071 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 36

Conread position: 18-213
Cow position: chr5:34288221-34288028 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 36

Conread position: 55-243
Cow position: chr5:9559487-9559672 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 49

Conread position: 56-214
Cow position: chr5:34787641-34787799 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 56-222
Cow position: chr5:37253496-37253658 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 56-225
Cow position: chr5:49207260-49207091 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 131

Conread position: 56-225
Cow position: chr5:57497357-57497188 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 56-231
Cow position: chr5:51289527-51289356 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 159, 57

Conread position: 56-232
Cow position: chr5:34918413-34918587 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 58-214
Cow position: chr5:21721401-21721249 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 42

Conread position: 63-214
Cow position: chr5:58487449-58487600 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 34

Conread position: 63-243
Cow position: chr5:19626652-19626829 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 148, 0

Conread position: 64-226
Cow position: chr5:26467703-26467866 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 36

Conread position: 64-230
Cow position: chr5:47960186-47960020 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 149, 54

Conread position: 69-233
Cow position: chr5:6245583-6245418 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 159, 0

Show alignments to all cow chromosomes.