Cow genome map
| Conread name: | Ova1-OVRM10100E09 |
| Conread position: | 3-213 |
| Cow position: | chr6:1941804-1941595 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 64, 47 |
| Conread position: | 3-218 |
| Cow position: | chr6:8966126-8966332 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 4-211 |
| Cow position: | chr6:46465850-46466055 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 82, 100 |
| Conread position: | 4-212 |
| Cow position: | chr6:10105950-10105745 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 4-212 |
| Cow position: | chr6:58725399-58725605 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 4-213 |
| Cow position: | chr6:17068619-17068416 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 4-213 |
| Cow position: | chr6:50504485-50504695 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 4-213 |
| Cow position: | chr6:63065855-63066076 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 4-218 |
| Cow position: | chr6:29485111-29485327 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-229 |
| Cow position: | chr6:2078786-2078562 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 4-229 |
| Cow position: | chr6:38640262-38640489 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 20 |
| Conread position: | 4-229 |
| Cow position: | chr6:53546064-53546283 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 82, 100 |
| Conread position: | 4-231 |
| Cow position: | chr6:50090671-50090901 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 124 |
| Conread position: | 4-231 |
| Cow position: | chr6:60850729-60850954 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 90, 100 |
| Conread position: | 4-233 |
| Cow position: | chr6:13687783-13687558 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 83, 93 |
| Conread position: | 4-234 |
| Cow position: | chr6:52478382-52478150 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 4-239 |
| Cow position: | chr6:36202850-36203086 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 110, 50 |
| Conread position: | 4-254 |
| Cow position: | chr6:694122-693865 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 107 |
| Conread position: | 4-258 |
| Cow position: | chr6:51581223-51580970 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 122, 43 |
| Conread position: | 4-262 |
| Cow position: | chr6:30023914-30024170 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 210, 113 |
| Conread position: | 4-265 |
| Cow position: | chr6:19292830-19293088 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 146, 94 |
| Conread position: | 6-209 |
| Cow position: | chr6:38207459-38207250 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 108, 179 |
| Conread position: | 6-222 |
| Cow position: | chr6:23938091-23938298 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 6-235 |
| Cow position: | chr6:16090934-16091158 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 209, 112 |
| Conread position: | 7-238 |
| Cow position: | chr6:3351060-3351292 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 104, 93 |
| Conread position: | 8-218 |
| Cow position: | chr6:53024771-53024567 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 8-230 |
| Cow position: | chr6:5601735-5601956 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 143, 46 |
| Conread position: | 8-250 |
| Cow position: | chr6:42034805-42035044 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 10-213 |
| Cow position: | chr6:24468361-24468160 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 10-248 |
| Cow position: | chr6:53145649-53145407 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 17-211 |
| Cow position: | chr6:21083499-21083304 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 20-212 |
| Cow position: | chr6:36537316-36537125 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 20-267 |
| Cow position: | chr6:21350988-21350733 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 104, 58 |
| Conread position: | 56-211 |
| Cow position: | chr6:38032938-38033095 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 56-248 |
| Cow position: | chr6:50577601-50577789 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 56-290 |
| Cow position: | chr6:21004757-21004996 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 57, 47 |
| Conread position: | 59-230 |
| Cow position: | chr6:46558141-46558310 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 64-267 |
| Cow position: | chr6:32006366-32006166 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 154, 0 |
Show alignments to all cow chromosomes.