Cow genome map
| Conread name: | Ova1-OVRM10100E09 |
| Conread position: | 3-212 |
| Cow position: | chr7:50066086-50065877 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 91, 131 |
| Conread position: | 3-217 |
| Cow position: | chr7:31523575-31523791 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 82, 88 |
| Conread position: | 4-209 |
| Cow position: | chr7:8658546-8658751 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-211 |
| Cow position: | chr7:32946099-32946305 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 4-212 |
| Cow position: | chr7:10415103-10414900 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 4-214 |
| Cow position: | chr7:35300387-35300179 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 131 |
| Conread position: | 4-214 |
| Cow position: | chr7:46856932-46856726 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 94, 100 |
| Conread position: | 4-217 |
| Cow position: | chr7:6044106-6043892 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 4-217 |
| Cow position: | chr7:49106168-49105957 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 206, 33 |
| Conread position: | 4-218 |
| Cow position: | chr7:4764877-4765085 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 4-218 |
| Cow position: | chr7:11960428-11960637 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 74 |
| Conread position: | 4-218 |
| Cow position: | chr7:26871960-26871743 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 4-218 |
| Cow position: | chr7:32894217-32893993 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 4-221 |
| Cow position: | chr7:10181-10395 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 4-223 |
| Cow position: | chr7:39415941-39416157 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 151, 128 |
| Conread position: | 4-226 |
| Cow position: | chr7:6469652-6469879 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 218 |
| Conread position: | 4-226 |
| Cow position: | chr7:11487641-11487422 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 112, 54 |
| Conread position: | 4-226 |
| Cow position: | chr7:22793375-22793589 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 4-227 |
| Cow position: | chr7:26909729-26909508 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 107, 33 |
| Conread position: | 4-229 |
| Cow position: | chr7:9077779-9077551 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 4-230 |
| Cow position: | chr7:20968448-20968682 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 4-231 |
| Cow position: | chr7:33393340-33393565 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 4-232 |
| Cow position: | chr7:48714885-48715125 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 4-232 |
| Cow position: | chr7:53053372-53053145 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 161, 130 |
| Conread position: | 4-234 |
| Cow position: | chr7:15559718-15559946 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 4-235 |
| Cow position: | chr7:29505146-29505377 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 206, 144 |
| Conread position: | 4-235 |
| Cow position: | chr7:58800200-58800433 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 88, 84 |
| Conread position: | 4-241 |
| Cow position: | chr7:15570069-15570307 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 4-251 |
| Cow position: | chr7:47931765-47931510 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 82, 99 |
| Conread position: | 4-253 |
| Cow position: | chr7:5199517-5199278 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-254 |
| Cow position: | chr7:9816029-9816285 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 4-266 |
| Cow position: | chr7:36996393-36996653 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 215, 99 |
| Conread position: | 4-289 |
| Cow position: | chr7:14029342-14029622 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 4-294 |
| Cow position: | chr7:11897496-11897780 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 134, 86 |
| Conread position: | 5-201 |
| Cow position: | chr7:14316974-14317168 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 6-217 |
| Cow position: | chr7:20534905-20535117 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 6-223 |
| Cow position: | chr7:57593463-57593678 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 206, 166 |
| Conread position: | 6-248 |
| Cow position: | chr7:12495087-12494846 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 218, 0 |
| Conread position: | 7-248 |
| Cow position: | chr7:36665359-36665601 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 125, 81 |
| Conread position: | 11-226 |
| Cow position: | chr7:35088695-35088914 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 12-226 |
| Cow position: | chr7:18544342-18544137 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 13-213 |
| Cow position: | chr7:11785004-11784804 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-213 |
| Cow position: | chr7:17750797-17750600 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 86 |
| Conread position: | 31-214 |
| Cow position: | chr7:10438386-10438569 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 72 |
| Conread position: | 32-230 |
| Cow position: | chr7:46191900-46191701 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 56-214 |
| Cow position: | chr7:65695224-65695066 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-283 |
| Cow position: | chr7:20936543-20936317 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 126, 162 |
| Conread position: | 58-247 |
| Cow position: | chr7:39988819-39989010 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 62-234 |
| Cow position: | chr7:39093837-39093661 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.