Cow genome map

Conread name: Ova1-OVRM10100E09

Conread position: 1-214
Cow position: chrX:2935970-2936182 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 123, 0

Conread position: 3-205
Cow position: chrX:31436489-31436689 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 135, 0

Conread position: 3-213
Cow position: chrX:31479986-31480194 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 58

Conread position: 3-230
Cow position: chrX:42479848-42480073 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 176, 97

Conread position: 3-235
Cow position: chrX:1466177-1466412 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 118, 217

Conread position: 3-249
Cow position: chrX:12095759-12095507 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 104

Conread position: 4-209
Cow position: chrX:17794997-17795203 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 196

Conread position: 4-213
Cow position: chrX:8869386-8869176 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 107, 95

Conread position: 4-214
Cow position: chrX:9252147-9251934 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 4-214
Cow position: chrX:10252182-10251973 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 51

Conread position: 4-214
Cow position: chrX:20583682-20583889 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 175, 0

Conread position: 4-214
Cow position: chrX:25207839-25207632 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 81

Conread position: 4-214
Cow position: chrX:27668942-27668733 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 107, 99

Conread position: 4-218
Cow position: chrX:32208806-32208594 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 107, 75

Conread position: 4-218
Cow position: chrX:34376958-34377173 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 96

Conread position: 4-219
Cow position: chrX:40685312-40685095 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 141, 0

Conread position: 4-226
Cow position: chrX:5118486-5118254 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 123

Conread position: 4-226
Cow position: chrX:22392968-22392749 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 4-226
Cow position: chrX:29050266-29050483 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 50

Conread position: 4-226
Cow position: chrX:42927808-42927590 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 128, 0

Conread position: 4-229
Cow position: chrX:11656097-11656322 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 4-229
Cow position: chrX:12290735-12290962 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 85, 93

Conread position: 4-230
Cow position: chrX:29467762-29467537 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 107, 96

Conread position: 4-230
Cow position: chrX:34411862-34412094 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 144, 0

Conread position: 4-233
Cow position: chrX:16836270-16836046 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 4-233
Cow position: chrX:16984657-16984882 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 4-234
Cow position: chrX:12972697-12972928 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 129

Conread position: 4-234
Cow position: chrX:27431902-27431675 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 175, 0

Conread position: 4-235
Cow position: chrX:6599766-6599523 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 4-240
Cow position: chrX:13177462-13177227 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 132

Conread position: 4-257
Cow position: chrX:42449998-42449746 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 82, 108

Conread position: 4-273
Cow position: chrX:34837048-34836781 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 218, 120

Conread position: 4-280
Cow position: chrX:27145620-27145900 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 240, 130

Conread position: 6-213
Cow position: chrX:9201566-9201771 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 176, 132

Conread position: 6-214
Cow position: chrX:14883938-14883728 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 79, 106

Conread position: 6-218
Cow position: chrX:37781091-37780878 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 175

Conread position: 6-259
Cow position: chrX:35885709-35885454 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 105, 92

Conread position: 7-222
Cow position: chrX:34314042-34314257 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 6, 205

Conread position: 8-213
Cow position: chrX:42381092-42380884 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 122, 179

Conread position: 13-222
Cow position: chrX:37072414-37072622 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 203, 0

Conread position: 13-234
Cow position: chrX:32866900-32867119 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 201, 137

Conread position: 18-213
Cow position: chrX:23359081-23358889 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 23-229
Cow position: chrX:34991399-34991606 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 191, 0

Conread position: 56-227
Cow position: chrX:14135746-14135917 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 56-240
Cow position: chrX:40556391-40556209 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 98

Conread position: 56-271
Cow position: chrX:17525799-17525589 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 159, 78

Conread position: 57-273
Cow position: chrX:47855050-47855268 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 157, 23

Conread position: 63-226
Cow position: chrX:51826-51661 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 23

Conread position: 64-262
Cow position: chrX:42875288-42875484 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 33

Show alignments to all cow chromosomes.