Cow genome map

Conread name: Ova1-OVRM10105C05

Conread position: 1-231
Cow position: chr1:89809756-89809993 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 1-238
Cow position: chr1:18014327-18014562 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 115, 31

Conread position: 1-277
Cow position: chr1:68607684-68607961 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 1-431
Cow position: chr1:49974327-49974749 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 114

Conread position: 1-431
Cow position: chr1:69922599-69923026 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 280

Conread position: 1-431
Cow position: chr1:79457103-79457529 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 280

Conread position: 1-433
Cow position: chr1:20828754-20828317 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 305
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 10, 125

Conread position: 2-151
Cow position: chr1:99349155-99349307 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 2-156
Cow position: chr1:29361871-29361716 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 2-161
Cow position: chr1:33851142-33850982 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 2-174
Cow position: chr1:40307927-40307761 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 2-205
Cow position: chr1:33895542-33895337 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 2-226
Cow position: chr1:28722655-28722430 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 37, 0

Conread position: 2-238
Cow position: chr1:18406327-18406572 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 2-250
Cow position: chr1:89770820-89771062 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 22

Conread position: 2-252
Cow position: chr1:40953573-40953325 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 36, 55

Conread position: 2-258
Cow position: chr1:69766327-69766077 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 63

Conread position: 2-278
Cow position: chr1:43019988-43019714 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 37, 134

Conread position: 2-278
Cow position: chr1:89425453-89425176 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 37, 0

Conread position: 2-318
Cow position: chr1:6708231-6708549 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 201, 32

Conread position: 2-318
Cow position: chr1:88759430-88759107 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 222

Conread position: 2-325
Cow position: chr1:8554191-8553862 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 215

Conread position: 2-325
Cow position: chr1:11292241-11292570 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 257

Conread position: 2-325
Cow position: chr1:17036695-17037017 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 122

Conread position: 2-325
Cow position: chr1:30023328-30023656 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 215

Conread position: 2-325
Cow position: chr1:39543634-39543305 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 2-325
Cow position: chr1:40053218-40052893 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 108

Conread position: 2-325
Cow position: chr1:52172608-52172937 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-325
Cow position: chr1:53198656-53198326 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 0

Conread position: 2-325
Cow position: chr1:55276623-55276945 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 121

Conread position: 2-325
Cow position: chr1:56163189-56162865 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 278, 34

Conread position: 2-325
Cow position: chr1:56489702-56489381 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 225
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 121

Conread position: 2-325
Cow position: chr1:59210271-59210600 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 266

Conread position: 2-325
Cow position: chr1:79920864-79921193 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 215

Conread position: 2-325
Cow position: chr1:80359306-80359631 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 32

Conread position: 2-325
Cow position: chr1:86548271-86548588 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 278, 32

Conread position: 2-325
Cow position: chr1:91718771-91719104 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 0

Conread position: 2-325
Cow position: chr1:91898864-91898543 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 235
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 37, 124

Conread position: 2-390
Cow position: chr1:28872940-28872556 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 279

Conread position: 2-403
Cow position: chr1:3386144-3386540 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 278

Conread position: 2-421
Cow position: chr1:72120015-72119608 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 120

Conread position: 2-426
Cow position: chr1:82918795-82919197 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 97

Conread position: 2-428
Cow position: chr1:58335699-58335277 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 121

Conread position: 2-431
Cow position: chr1:1461464-1461885 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 237

Conread position: 2-431
Cow position: chr1:5501838-5501416 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 217

Conread position: 2-431
Cow position: chr1:8824922-8824505 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 32

Conread position: 2-431
Cow position: chr1:25180168-25180593 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 284

Conread position: 2-431
Cow position: chr1:42290258-42289867 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 299
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 154

Conread position: 2-431
Cow position: chr1:62244785-62245212 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 76

Conread position: 2-431
Cow position: chr1:62805943-62806365 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 119

Conread position: 2-431
Cow position: chr1:76545680-76546100 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 32

Conread position: 2-431
Cow position: chr1:76623085-76623506 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 32

Conread position: 2-431
Cow position: chr1:88130621-88130199 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 198

Conread position: 2-431
Cow position: chr1:89899839-89900242 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 69

Conread position: 2-431
Cow position: chr1:93854383-93853959 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 253

Conread position: 2-431
Cow position: chr1:97123695-97123292 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 69

Conread position: 2-432
Cow position: chr1:62925476-62925036 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 315

Conread position: 2-432
Cow position: chr1:67835275-67835716 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 310
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 7, 24

Conread position: 2-432
Cow position: chr1:87449816-87449358 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 2-458
Cow position: chr1:25549926-25549471 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 279

Conread position: 2-458
Cow position: chr1:57567813-57567367 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 279

Conread position: 2-458
Cow position: chr1:63605919-63606376 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 280

Conread position: 2-472
Cow position: chr1:55776017-55775552 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 245

Conread position: 2-473
Cow position: chr1:56194068-56194541 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 279

Conread position: 2-475
Cow position: chr1:33711926-33711457 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 99

Conread position: 2-480
Cow position: chr1:13253575-13254043 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 32

Conread position: 2-481
Cow position: chr1:42736320-42735843 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 271

Conread position: 2-481
Cow position: chr1:72981130-72980667 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 120

Conread position: 2-483
Cow position: chr1:17012873-17013379 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 2-483
Cow position: chr1:31396276-31395780 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 32

Conread position: 2-483
Cow position: chr1:61308865-61308366 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 338
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 38, 190

Conread position: 2-483
Cow position: chr1:71562715-71563218 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 331
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 122, 32

Conread position: 2-483
Cow position: chr1:82564367-82563864 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 105

Conread position: 2-483
Cow position: chr1:82652500-82651996 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 123

Conread position: 2-483
Cow position: chr1:89740382-89740856 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 21

Conread position: 2-489
Cow position: chr1:18244525-18245007 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 172

Conread position: 3-186
Cow position: chr1:56144468-56144652 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 3-205
Cow position: chr1:54365959-54366153 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 26

Conread position: 3-246
Cow position: chr1:72656845-72656601 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 105

Conread position: 3-268
Cow position: chr1:8330161-8330422 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 245, 38

Conread position: 3-355
Cow position: chr1:102555948-102555606 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 240
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 35, 46

Conread position: 3-431
Cow position: chr1:76752789-76753211 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 140

Conread position: 3-431
Cow position: chr1:86699354-86699782 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 282

Conread position: 3-432
Cow position: chr1:85791553-85791104 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 60

Conread position: 3-460
Cow position: chr1:5318622-5318181 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 310
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 68

Conread position: 3-470
Cow position: chr1:97226838-97227311 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 295

Conread position: 3-472
Cow position: chr1:101149697-101149250 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 20

Conread position: 3-475
Cow position: chr1:55323658-55324134 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 70

Conread position: 3-476
Cow position: chr1:20988622-20988157 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 318
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 58, 33

Conread position: 3-483
Cow position: chr1:40513634-40514108 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 94

Conread position: 4-468
Cow position: chr1:34689203-34688755 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 53

Conread position: 5-325
Cow position: chr1:58224152-58223835 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 225, 29

Conread position: 6-252
Cow position: chr1:69536763-69536517 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 69, 23

Conread position: 6-429
Cow position: chr1:101858125-101858519 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 6-431
Cow position: chr1:13645590-13645181 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 304
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 237

Conread position: 9-505
Cow position: chr1:67286346-67285867 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 94

Conread position: 10-325
Cow position: chr1:40684835-40685151 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 29, 93

Conread position: 10-335
Cow position: chr1:21087268-21086933 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 88, 24

Conread position: 11-431
Cow position: chr1:72187019-72187434 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 18

Conread position: 11-431
Cow position: chr1:79335951-79336356 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 204

Conread position: 11-431
Cow position: chr1:85780924-85781336 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 272

Conread position: 11-431
Cow position: chr1:100597529-100597943 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 13

Conread position: 11-431
Cow position: chr1:102435173-102435589 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 271

Conread position: 11-493
Cow position: chr1:79637075-79637572 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 27

Conread position: 12-223
Cow position: chr1:59674342-59674130 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 26, 104

Conread position: 12-370
Cow position: chr1:31366224-31366595 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 27, 332

Conread position: 12-431
Cow position: chr1:33550775-33550360 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 12

Conread position: 12-431
Cow position: chr1:57367279-57367694 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 269

Conread position: 12-431
Cow position: chr1:69402845-69402431 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 165

Conread position: 12-431
Cow position: chr1:85881595-85881189 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 72

Conread position: 12-460
Cow position: chr1:17941958-17942420 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 12-475
Cow position: chr1:63501312-63500849 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 305
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 124, 94

Conread position: 13-305
Cow position: chr1:18880533-18880831 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 26, 204

Conread position: 13-472
Cow position: chr1:58179914-58180356 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 300
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 201, 81

Conread position: 13-483
Cow position: chr1:28801574-28802021 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 228

Conread position: 14-431
Cow position: chr1:62853979-62854372 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 20

Conread position: 14-484
Cow position: chr1:22000105-22000572 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 230

Conread position: 14-484
Cow position: chr1:57656413-57655907 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 345
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 7, 96

Conread position: 15-318
Cow position: chr1:99995243-99995552 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 202

Conread position: 15-478
Cow position: chr1:30058399-30057939 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 307
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 121, 63

Conread position: 16-215
Cow position: chr1:57661389-57661190 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 56

Conread position: 16-480
Cow position: chr1:42176547-42176982 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 310
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 75

Conread position: 17-255
Cow position: chr1:38414655-38414422 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 17-323
Cow position: chr1:30027693-30027984 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 22, 97

Conread position: 17-393
Cow position: chr1:67902570-67902961 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 21, 94

Conread position: 17-431
Cow position: chr1:88635223-88634837 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 86

Conread position: 17-479
Cow position: chr1:98661443-98661896 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 302
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 90

Conread position: 20-474
Cow position: chr1:25887300-25887736 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 319
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 19, 50

Conread position: 23-216
Cow position: chr1:87207569-87207775 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 23-431
Cow position: chr1:87244641-87244247 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 213

Conread position: 23-480
Cow position: chr1:86609043-86608589 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 307
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 16, 79

Conread position: 25-431
Cow position: chr1:73071178-73071591 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 82

Conread position: 25-433
Cow position: chr1:37420134-37420542 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 46

Conread position: 28-460
Cow position: chr1:23050482-23050049 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 288
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 78, 17

Conread position: 36-325
Cow position: chr1:8027313-8027608 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 92, 0

Conread position: 37-318
Cow position: chr1:13450018-13449732 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 243, 0

Conread position: 37-472
Cow position: chr1:76703541-76703954 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 65

Conread position: 41-484
Cow position: chr1:11863439-11863897 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 149

Conread position: 45-325
Cow position: chr1:97560536-97560253 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 235, 127

Conread position: 50-325
Cow position: chr1:30283789-30284058 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 230, 73

Conread position: 52-484
Cow position: chr1:3934353-3934765 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 43

Conread position: 56-432
Cow position: chr1:52233292-52233639 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 41, 0

Conread position: 71-490
Cow position: chr1:101760971-101760552 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 261
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 285, 61

Conread position: 77-431
Cow position: chr1:72080265-72079920 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 194

Conread position: 78-476
Cow position: chr1:72135223-72134825 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 43

Conread position: 79-472
Cow position: chr1:61732838-61732455 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 272
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 125, 12

Conread position: 85-431
Cow position: chr1:94659656-94659315 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 195

Conread position: 92-325
Cow position: chr1:56722904-56722666 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 166, 158

Conread position: 93-476
Cow position: chr1:9382475-9382888 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 272
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 33

Conread position: 107-484
Cow position: chr1:37455470-37455096 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 144

Conread position: 110-460
Cow position: chr1:79108863-79108519 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 227
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 247, 142

Conread position: 114-245
Cow position: chr1:102548956-102548826 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 141-490
Cow position: chr1:53046218-53046565 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 231
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 216, 112

Conread position: 147-477
Cow position: chr1:40907845-40907511 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 126, 230

Conread position: 155-483
Cow position: chr1:33850947-33850609 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 216
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 23

Conread position: 174-431
Cow position: chr1:91893312-91893560 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 74

Conread position: 230-475
Cow position: chr1:28722468-28722212 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 246-432
Cow position: chr1:87208002-87208191 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 86

Conread position: 251-464
Cow position: chr1:53364316-53364101 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 22

Conread position: 260-431
Cow position: chr1:45097214-45097043 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 99, 16

Conread position: 272-432
Cow position: chr1:69764599-69764435 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 39

Conread position: 278-474
Cow position: chr1:52323492-52323292 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 84, 10

Conread position: 308-431
Cow position: chr1:102548728-102548603 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 308-482
Cow position: chr1:52172941-52173126 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 173

Conread position: 314-431
Cow position: chr1:56722656-56722537 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 314-483
Cow position: chr1:59672647-59672475 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 48, 166

Show alignments to all cow chromosomes.