Cow genome map
| Conread name: | Ova1-OVRM10105C05 |
| Conread position: | 1-325 |
| Cow position: | chr10:41566995-41566670 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 101, 33 |
| Conread position: | 1-484 |
| Cow position: | chr10:37769710-37769228 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 247 |
| Conread position: | 2-152 |
| Cow position: | chr10:50018173-50018322 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 113, 32 |
| Conread position: | 2-231 |
| Cow position: | chr10:10478257-10478473 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 2-252 |
| Cow position: | chr10:25359286-25359039 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 37, 178 |
| Conread position: | 2-252 |
| Cow position: | chr10:25565359-25565603 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 2-325 |
| Cow position: | chr10:280733-281062 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-325 |
| Cow position: | chr10:32578189-32577859 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 2-325 |
| Cow position: | chr10:41157337-41157014 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 77 |
| Conread position: | 2-325 |
| Cow position: | chr10:47906664-47906340 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 34 |
| Conread position: | 2-325 |
| Cow position: | chr10:51952719-51953044 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 22 |
| Conread position: | 2-431 |
| Cow position: | chr10:276480-276077 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 105 |
| Conread position: | 2-431 |
| Cow position: | chr10:1375423-1375002 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 216 |
| Conread position: | 2-431 |
| Cow position: | chr10:7282796-7283217 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 246 |
| Conread position: | 2-431 |
| Cow position: | chr10:21486803-21486381 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 281 |
| Conread position: | 2-431 |
| Cow position: | chr10:29846723-29847155 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 280 |
| Conread position: | 2-431 |
| Cow position: | chr10:34685782-34685371 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 110 |
| Conread position: | 2-431 |
| Cow position: | chr10:38345476-38345911 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 311 |
| Conread position: | 2-431 |
| Cow position: | chr10:39041418-39041843 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 279 |
| Conread position: | 2-431 |
| Cow position: | chr10:62778232-62777818 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 237 |
| Conread position: | 2-432 |
| Cow position: | chr10:32650619-32650202 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 111 |
| Conread position: | 2-432 |
| Cow position: | chr10:62216493-62216077 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 119 |
| Conread position: | 2-470 |
| Cow position: | chr10:38538611-38539071 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 22 |
| Conread position: | 2-472 |
| Cow position: | chr10:11685781-11686271 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 22 |
| Conread position: | 2-472 |
| Cow position: | chr10:29696128-29695664 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 105 |
| Conread position: | 2-472 |
| Cow position: | chr10:60489549-60489076 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 2-475 |
| Cow position: | chr10:38546336-38546814 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 171 |
| Conread position: | 2-476 |
| Cow position: | chr10:19511492-19511026 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 69 |
| Conread position: | 2-483 |
| Cow position: | chr10:4192331-4192840 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 27 |
| Conread position: | 2-483 |
| Cow position: | chr10:14803721-14803217 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 124 |
| Conread position: | 2-483 |
| Cow position: | chr10:21400785-21401292 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 91 |
| Conread position: | 3-234 |
| Cow position: | chr10:24978245-24978480 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 3-431 |
| Cow position: | chr10:10581561-10581118 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 237 |
| Conread position: | 3-460 |
| Cow position: | chr10:34318383-34318821 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 302 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 357, 21 |
| Conread position: | 3-472 |
| Cow position: | chr10:49310416-49309964 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 21 |
| Conread position: | 3-476 |
| Cow position: | chr10:61297218-61296710 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 163 |
| Conread position: | 3-480 |
| Cow position: | chr10:4499588-4499120 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 26 |
| Conread position: | 3-482 |
| Cow position: | chr10:42109619-42109147 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 302 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 32, 123 |
| Conread position: | 3-482 |
| Cow position: | chr10:42747988-42747517 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 22, 138 |
| Conread position: | 3-483 |
| Cow position: | chr10:29632973-29633421 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 3-498 |
| Cow position: | chr10:24298966-24299461 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 108 |
| Conread position: | 4-246 |
| Cow position: | chr10:58596388-58596148 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 4-418 |
| Cow position: | chr10:41351870-41352281 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 59, 79 |
| Conread position: | 5-483 |
| Cow position: | chr10:39179666-39179166 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 328 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 6-427 |
| Cow position: | chr10:14859860-14859455 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 120 |
| Conread position: | 6-472 |
| Cow position: | chr10:57990087-57990539 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 23 |
| Conread position: | 10-483 |
| Cow position: | chr10:41876797-41876296 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 321 |
| Conread position: | 11-431 |
| Cow position: | chr10:62408974-62409389 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 270 |
| Conread position: | 11-448 |
| Cow position: | chr10:124187-123768 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 11-458 |
| Cow position: | chr10:19143461-19143908 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 104 |
| Conread position: | 12-324 |
| Cow position: | chr10:39817473-39817786 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 114 |
| Conread position: | 12-431 |
| Cow position: | chr10:22101118-22100705 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 242 |
| Conread position: | 12-431 |
| Cow position: | chr10:37060806-37060392 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 268 |
| Conread position: | 12-483 |
| Cow position: | chr10:19840029-19839548 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 325 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 12-483 |
| Cow position: | chr10:21740875-21741376 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 22 |
| Conread position: | 12-483 |
| Cow position: | chr10:55092987-55092488 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 265 |
| Conread position: | 13-318 |
| Cow position: | chr10:57559677-57559982 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 13-481 |
| Cow position: | chr10:21901318-21901770 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 113 |
| Conread position: | 15-207 |
| Cow position: | chr10:21076238-21076044 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 17-431 |
| Cow position: | chr10:25498227-25497826 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 18-269 |
| Cow position: | chr10:15862428-15862671 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 19-481 |
| Cow position: | chr10:46191244-46190794 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 320 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 24-216 |
| Cow position: | chr10:42628531-42628347 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 24-278 |
| Cow position: | chr10:54059485-54059736 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 24-484 |
| Cow position: | chr10:31523704-31523269 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 36-348 |
| Cow position: | chr10:19715194-19715497 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 36-432 |
| Cow position: | chr10:21467107-21466683 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 293 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 167, 180 |
| Conread position: | 53-352 |
| Cow position: | chr10:28116606-28116889 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 18 |
| Conread position: | 72-485 |
| Cow position: | chr10:54127275-54126867 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 25 |
| Conread position: | 73-431 |
| Cow position: | chr10:8289785-8289431 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 208 |
| Conread position: | 78-431 |
| Cow position: | chr10:183353-183007 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 84-277 |
| Cow position: | chr10:2123307-2123500 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-228 |
| Cow position: | chr10:1938035-1938181 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 122-485 |
| Cow position: | chr10:42736273-42735922 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 100, 159 |
| Conread position: | 143-431 |
| Cow position: | chr10:37040832-37040552 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 159, 56 |
| Conread position: | 152-476 |
| Cow position: | chr10:19497197-19497533 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 215-475 |
| Cow position: | chr10:42628139-42627878 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 147, 29 |
| Conread position: | 306-431 |
| Cow position: | chr10:40425281-40425155 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 311-484 |
| Cow position: | chr10:39780265-39780446 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 314-431 |
| Cow position: | chr10:25358937-25358818 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.