Cow genome map

Conread name: Ova1-OVRM10105C05

Conread position: 2-164
Cow position:
Alignm length: 164
Alignm identity: 131
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 2-226
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 2-228
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 37, 117

Conread position: 2-234
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 104

Conread position: 2-240
Cow position:
Alignm length: 240
Alignm identity: 181
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 53

Conread position: 2-246
Cow position:
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 2-249
Cow position:
Alignm length: 250
Alignm identity: 185
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 37, 193

Conread position: 2-277
Cow position:
Alignm length: 279
Alignm identity: 189
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 2-325
Cow position:
Alignm length: 334
Alignm identity: 232
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 37, 91

Conread position: 2-325
Cow position:
Alignm length: 331
Alignm identity: 231
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 123

Conread position: 2-325
Cow position:
Alignm length: 330
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 2-325
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 37, 128

Conread position: 2-325
Cow position:
Alignm length: 330
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 217

Conread position: 2-325
Cow position:
Alignm length: 330
Alignm identity: 224
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 201, 32

Conread position: 2-325
Cow position:
Alignm length: 332
Alignm identity: 230
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 110, 32

Conread position: 2-325
Cow position:
Alignm length: 337
Alignm identity: 233
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 37, 127

Conread position: 2-325
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 61

Conread position: 2-335
Cow position:
Alignm length: 347
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 2-431
Cow position:
Alignm length: 433
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 234

Conread position: 2-431
Cow position:
Alignm length: 431
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 105

Conread position: 2-431
Cow position:
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 280

Conread position: 2-431
Cow position:
Alignm length: 439
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 240

Conread position: 2-431
Cow position:
Alignm length: 433
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 279

Conread position: 2-431
Cow position:
Alignm length: 434
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 279

Conread position: 2-431
Cow position:
Alignm length: 436
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 30

Conread position: 2-431
Cow position:
Alignm length: 435
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 246

Conread position: 2-431
Cow position:
Alignm length: 431
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 21

Conread position: 2-431
Cow position:
Alignm length: 434
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 279

Conread position: 2-431
Cow position:
Alignm length: 448
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 32

Conread position: 2-431
Cow position:
Alignm length: 434
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 105

Conread position: 2-432
Cow position:
Alignm length: 461
Alignm identity: 309
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 37, 215

Conread position: 2-472
Cow position:
Alignm length: 479
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 267

Conread position: 2-480
Cow position:
Alignm length: 489
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 281

Conread position: 2-483
Cow position:
Alignm length: 500
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 320

Conread position: 2-483
Cow position:
Alignm length: 509
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 418

Conread position: 2-484
Cow position:
Alignm length: 494
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 175

Conread position: 2-484
Cow position:
Alignm length: 491
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 278

Conread position: 2-484
Cow position:
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 278

Conread position: 2-487
Cow position:
Alignm length: 500
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 3-238
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 60

Conread position: 3-240
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 8, 34

Conread position: 3-246
Cow position:
Alignm length: 249
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 155, 102

Conread position: 3-316
Cow position:
Alignm length: 320
Alignm identity: 216
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 36, 80

Conread position: 3-416
Cow position:
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 278

Conread position: 3-467
Cow position:
Alignm length: 494
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 8

Conread position: 3-472
Cow position:
Alignm length: 479
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 3-475
Cow position:
Alignm length: 481
Alignm identity: 319
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 251, 21

Conread position: 3-480
Cow position:
Alignm length: 485
Alignm identity: 307
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 21

Conread position: 3-480
Cow position:
Alignm length: 491
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 116

Conread position: 3-483
Cow position:
Alignm length: 488
Alignm identity: 321
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 8

Conread position: 6-324
Cow position:
Alignm length: 323
Alignm identity: 210
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 33, 101

Conread position: 6-427
Cow position:
Alignm length: 431
Alignm identity: 288
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 17

Conread position: 6-475
Cow position:
Alignm length: 492
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 272

Conread position: 6-476
Cow position:
Alignm length: 479
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 101

Conread position: 11-462
Cow position:
Alignm length: 462
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 168

Conread position: 11-484
Cow position:
Alignm length: 479
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 212

Conread position: 12-431
Cow position:
Alignm length: 440
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 95

Conread position: 12-483
Cow position:
Alignm length: 486
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 249

Conread position: 12-483
Cow position:
Alignm length: 500
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 22

Conread position: 13-216
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 107

Conread position: 13-472
Cow position:
Alignm length: 487
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 246

Conread position: 14-431
Cow position:
Alignm length: 439
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 15

Conread position: 14-431
Cow position:
Alignm length: 418
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 0

Conread position: 14-431
Cow position:
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 267

Conread position: 15-475
Cow position:
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 19

Conread position: 17-239
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 21, 89

Conread position: 20-472
Cow position:
Alignm length: 456
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 14

Conread position: 20-483
Cow position:
Alignm length: 473
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 78

Conread position: 21-474
Cow position:
Alignm length: 462
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 124

Conread position: 23-244
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 65

Conread position: 23-460
Cow position:
Alignm length: 449
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 220

Conread position: 23-470
Cow position:
Alignm length: 464
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 33

Conread position: 24-483
Cow position:
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 87

Conread position: 25-472
Cow position:
Alignm length: 481
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 74

Conread position: 26-239
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 10, 0

Conread position: 26-484
Cow position:
Alignm length: 497
Alignm identity: 338
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 6

Conread position: 29-482
Cow position:
Alignm length: 459
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 194

Conread position: 31-460
Cow position:
Alignm length: 439
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 92

Conread position: 31-475
Cow position:
Alignm length: 454
Alignm identity: 313
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 208

Conread position: 36-469
Cow position:
Alignm length: 438
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 39

Conread position: 41-394
Cow position:
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 80

Conread position: 41-431
Cow position:
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 238

Conread position: 52-483
Cow position:
Alignm length: 450
Alignm identity: 287
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 101, 59

Conread position: 72-470
Cow position:
Alignm length: 409
Alignm identity: 272
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 140, 76

Conread position: 73-432
Cow position:
Alignm length: 381
Alignm identity: 261
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 130, 184

Conread position: 82-494
Cow position:
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 19

Conread position: 86-325
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 117, 130

Conread position: 92-325
Cow position:
Alignm length: 235
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 158, 77

Conread position: 92-478
Cow position:
Alignm length: 392
Alignm identity: 246
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 265, 28

Conread position: 107-484
Cow position:
Alignm length: 385
Alignm identity: 263
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 255, 13

Conread position: 122-431
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 66, 166

Conread position: 123-431
Cow position:
Alignm length: 312
Alignm identity: 224
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 171, 106

Conread position: 193-431
Cow position:
Alignm length: 246
Alignm identity: 155
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 87, 0

Conread position: 203-464
Cow position:
Alignm length: 270
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 43

Conread position: 219-480
Cow position:
Alignm length: 262
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 224-430
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 9, 19

Conread position: 242-483
Cow position:
Alignm length: 245
Alignm identity: 162
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 117, 14

Conread position: 246-431
Cow position:
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 113, 25

Conread position: 249-431
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 31, 11

Conread position: 276-483
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 83, 64

Conread position: 308-484
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 27

Show alignments to all cow chromosomes.