Cow genome map
| Conread name: | Ova1-OVRM10105C05 |
| Conread position: | 1-431 |
| Cow position: | chr12:27933133-27933555 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 247 |
| Conread position: | 1-484 |
| Cow position: | chr12:2282360-2281868 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 99 |
| Conread position: | 2-225 |
| Cow position: | chr12:14662799-14663022 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 42, 119 |
| Conread position: | 2-231 |
| Cow position: | chr12:8310997-8310766 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-231 |
| Cow position: | chr12:21901758-21901535 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 2-250 |
| Cow position: | chr12:21941587-21941342 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-305 |
| Cow position: | chr12:32653356-32653050 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 35 |
| Conread position: | 2-325 |
| Cow position: | chr12:21207506-21207180 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 278, 32 |
| Conread position: | 2-325 |
| Cow position: | chr12:21254844-21255166 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 37, 120 |
| Conread position: | 2-325 |
| Cow position: | chr12:26141625-26141296 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 132 |
| Conread position: | 2-325 |
| Cow position: | chr12:37558368-37558042 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 32 |
| Conread position: | 2-342 |
| Cow position: | chr12:15951448-15951780 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 27 |
| Conread position: | 2-431 |
| Cow position: | chr12:2610-2202 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 162 |
| Conread position: | 2-431 |
| Cow position: | chr12:8678310-8678731 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 32 |
| Conread position: | 2-431 |
| Cow position: | chr12:11098053-11097629 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 279 |
| Conread position: | 2-431 |
| Cow position: | chr12:22332433-22332011 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 99 |
| Conread position: | 2-432 |
| Cow position: | chr12:25101250-25101681 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 32 |
| Conread position: | 2-483 |
| Cow position: | chr12:21426505-21426003 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 343 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 210, 32 |
| Conread position: | 2-507 |
| Cow position: | chr12:252244-252754 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 181 |
| Conread position: | 3-431 |
| Cow position: | chr12:6406834-6407255 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 143 |
| Conread position: | 3-431 |
| Cow position: | chr12:20998309-20998740 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 252 |
| Conread position: | 3-472 |
| Cow position: | chr12:2839783-2840243 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 20 |
| Conread position: | 3-480 |
| Cow position: | chr12:21499928-21499457 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 311 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 10-191 |
| Cow position: | chr12:42420606-42420788 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 11-431 |
| Cow position: | chr12:1402293-1401881 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 23 |
| Conread position: | 11-484 |
| Cow position: | chr12:42860012-42860484 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 270 |
| Conread position: | 12-483 |
| Cow position: | chr12:43031581-43032073 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 13-431 |
| Cow position: | chr12:22205946-22206353 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 25 |
| Conread position: | 17-476 |
| Cow position: | chr12:21197627-21197164 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 9 |
| Conread position: | 18-431 |
| Cow position: | chr12:26947460-26947858 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 300 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 53-325 |
| Cow position: | chr12:3360673-3360396 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 64-325 |
| Cow position: | chr12:21883775-21883507 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 139, 42 |
| Conread position: | 154-431 |
| Cow position: | chr12:45261300-45261040 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 81 |
| Conread position: | 173-404 |
| Cow position: | chr12:9708819-9709061 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 192-484 |
| Cow position: | chr12:22121347-22121053 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 40 |
| Conread position: | 204-431 |
| Cow position: | chr12:28766491-28766712 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 158, 78 |
| Conread position: | 215-484 |
| Cow position: | chr12:48404371-48404103 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 144, 39 |
| Conread position: | 215-515 |
| Cow position: | chr12:21058370-21058670 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 38, 192 |
| Conread position: | 243-509 |
| Cow position: | chr12:32183121-32182849 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 13, 179 |
| Conread position: | 279-460 |
| Cow position: | chr12:21941046-21940866 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 83, 47 |
| Conread position: | 295-431 |
| Cow position: | chr12:8310574-8310436 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 314-431 |
| Cow position: | chr12:21901486-21901367 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.