Cow genome map
| Conread name: | Ova1-OVRM10105C05 |
| Conread position: | 1-241 |
| Cow position: | chr13:34911775-34912013 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-431 |
| Cow position: | chr13:32525154-32525571 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 2-210 |
| Cow position: | chr13:3058403-3058611 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 2-252 |
| Cow position: | chr13:34143068-34143317 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 2-322 |
| Cow position: | chr13:50109054-50108732 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 32 |
| Conread position: | 2-325 |
| Cow position: | chr13:2297208-2297529 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 37, 80 |
| Conread position: | 2-325 |
| Cow position: | chr13:4872667-4872340 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 201, 32 |
| Conread position: | 2-325 |
| Cow position: | chr13:21840604-21840934 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-325 |
| Cow position: | chr13:31734490-31734810 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 36, 120 |
| Conread position: | 2-325 |
| Cow position: | chr13:34868359-34868033 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 2-395 |
| Cow position: | chr13:4482067-4481685 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 275 |
| Conread position: | 2-431 |
| Cow position: | chr13:1593563-1593989 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 207 |
| Conread position: | 2-431 |
| Cow position: | chr13:3276748-3276332 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 104 |
| Conread position: | 2-431 |
| Cow position: | chr13:15924792-15925217 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 279 |
| Conread position: | 2-431 |
| Cow position: | chr13:30302657-30302239 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 34 |
| Conread position: | 2-431 |
| Cow position: | chr13:31612745-31613169 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 121 |
| Conread position: | 2-431 |
| Cow position: | chr13:31832192-31831786 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 22 |
| Conread position: | 2-431 |
| Cow position: | chr13:32738230-32738641 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 32 |
| Conread position: | 2-431 |
| Cow position: | chr13:62327991-62328404 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 121 |
| Conread position: | 2-460 |
| Cow position: | chr13:15543056-15542599 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 279 |
| Conread position: | 2-460 |
| Cow position: | chr13:35756831-35756368 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 255 |
| Conread position: | 2-464 |
| Cow position: | chr13:4940677-4940215 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 277 |
| Conread position: | 2-472 |
| Cow position: | chr13:34692753-34692306 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 74 |
| Conread position: | 2-481 |
| Cow position: | chr13:15520923-15521409 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 308 |
| Conread position: | 2-481 |
| Cow position: | chr13:32986459-32986964 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 32 |
| Conread position: | 2-481 |
| Cow position: | chr13:34042774-34043252 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 168 |
| Conread position: | 2-483 |
| Cow position: | chr13:30245143-30245649 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 2-484 |
| Cow position: | chr13:32544538-32544061 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 105 |
| Conread position: | 2-484 |
| Cow position: | chr13:34326086-34326582 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 316 |
| Conread position: | 2-484 |
| Cow position: | chr13:35030102-35029605 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 24 |
| Conread position: | 2-509 |
| Cow position: | chr13:20542774-20543269 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 3-431 |
| Cow position: | chr13:33825140-33825562 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 3-474 |
| Cow position: | chr13:48356916-48356449 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 120 |
| Conread position: | 3-484 |
| Cow position: | chr13:33336731-33337211 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 245 |
| Conread position: | 5-472 |
| Cow position: | chr13:34767653-34768084 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 11-406 |
| Cow position: | chr13:30140576-30140178 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 96 |
| Conread position: | 11-431 |
| Cow position: | chr13:3654729-3655141 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 12-431 |
| Cow position: | chr13:9044091-9043698 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 117 |
| Conread position: | 12-431 |
| Cow position: | chr13:34187107-34187521 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 199 |
| Conread position: | 13-251 |
| Cow position: | chr13:34936718-34936480 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 14-475 |
| Cow position: | chr13:60703942-60704388 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 15-248 |
| Cow position: | chr13:13046241-13046477 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 24, 229 |
| Conread position: | 17-483 |
| Cow position: | chr13:30657385-30657837 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 219 |
| Conread position: | 18-246 |
| Cow position: | chr13:33927984-33928201 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 21, 79 |
| Conread position: | 23-406 |
| Cow position: | chr13:54284158-54283782 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 51 |
| Conread position: | 23-431 |
| Cow position: | chr13:2908874-2909265 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 211 |
| Conread position: | 24-480 |
| Cow position: | chr13:46732782-46733212 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 303 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 10, 99 |
| Conread position: | 26-325 |
| Cow position: | chr13:17308046-17307747 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 185, 95 |
| Conread position: | 29-479 |
| Cow position: | chr13:6668561-6669027 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 450 |
| Conread position: | 36-325 |
| Cow position: | chr13:53834328-53834034 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 167, 180 |
| Conread position: | 37-325 |
| Cow position: | chr13:2389238-2389534 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 42, 224 |
| Conread position: | 41-280 |
| Cow position: | chr13:30237721-30237491 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 135, 81 |
| Conread position: | 61-483 |
| Cow position: | chr13:61951722-61951304 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 102 |
| Conread position: | 80-318 |
| Cow position: | chr13:676477-676236 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 93-325 |
| Cow position: | chr13:49973216-49972977 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 131-432 |
| Cow position: | chr13:13324264-13323942 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 80, 85 |
| Conread position: | 150-476 |
| Cow position: | chr13:15080727-15081052 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 209, 130 |
| Conread position: | 224-472 |
| Cow position: | chr13:2232062-2231815 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 57 |
| Conread position: | 282-483 |
| Cow position: | chr13:34936175-34935968 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 308-476 |
| Cow position: | chr13:34868029-34867860 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 152 |
Show alignments to all cow chromosomes.