Cow genome map
| Conread name: | Ova1-OVRM10105C05 |
| Conread position: | 1-209 |
| Cow position: | chr14:16920214-16920423 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-269 |
| Cow position: | chr14:23256828-23256556 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 1-431 |
| Cow position: | chr14:5528529-5528109 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 28 |
| Conread position: | 1-431 |
| Cow position: | chr14:13660518-13660927 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 235 |
| Conread position: | 1-431 |
| Cow position: | chr14:20781924-20781501 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 121 |
| Conread position: | 1-472 |
| Cow position: | chr14:13272726-13272250 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 58 |
| Conread position: | 2-179 |
| Cow position: | chr14:44422024-44421847 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-238 |
| Cow position: | chr14:47624036-47623801 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 114 |
| Conread position: | 2-246 |
| Cow position: | chr14:29048434-29048672 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 110, 32 |
| Conread position: | 2-311 |
| Cow position: | chr14:9045032-9044723 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 37, 215 |
| Conread position: | 2-325 |
| Cow position: | chr14:750036-749715 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 37, 122 |
| Conread position: | 2-325 |
| Cow position: | chr14:17491990-17492313 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 37, 124 |
| Conread position: | 2-325 |
| Cow position: | chr14:30585469-30585798 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-325 |
| Cow position: | chr14:45672578-45672905 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 37, 128 |
| Conread position: | 2-384 |
| Cow position: | chr14:38532828-38533217 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 73 |
| Conread position: | 2-414 |
| Cow position: | chr14:36967726-36967330 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 2-431 |
| Cow position: | chr14:7471843-7471418 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 279 |
| Conread position: | 2-431 |
| Cow position: | chr14:11154686-11155111 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 279 |
| Conread position: | 2-431 |
| Cow position: | chr14:13302498-13302070 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 262 |
| Conread position: | 2-431 |
| Cow position: | chr14:19328802-19329224 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 32 |
| Conread position: | 2-431 |
| Cow position: | chr14:22032215-22032636 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 279 |
| Conread position: | 2-431 |
| Cow position: | chr14:23690757-23691175 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 234 |
| Conread position: | 2-431 |
| Cow position: | chr14:28994388-28994816 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 280 |
| Conread position: | 2-431 |
| Cow position: | chr14:37223369-37222944 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 279 |
| Conread position: | 2-431 |
| Cow position: | chr14:44855958-44856368 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 228 |
| Conread position: | 2-433 |
| Cow position: | chr14:50110048-50109629 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 188 |
| Conread position: | 2-439 |
| Cow position: | chr14:45916867-45916421 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 94 |
| Conread position: | 2-460 |
| Cow position: | chr14:16273829-16274288 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 280 |
| Conread position: | 2-475 |
| Cow position: | chr14:45767473-45767025 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 326 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 37, 137 |
| Conread position: | 2-484 |
| Cow position: | chr14:44376903-44376412 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 120 |
| Conread position: | 2-497 |
| Cow position: | chr14:45160331-45159815 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 34 |
| Conread position: | 3-214 |
| Cow position: | chr14:7831070-7831280 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 7, 123 |
| Conread position: | 3-423 |
| Cow position: | chr14:22018870-22018436 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 3-430 |
| Cow position: | chr14:35387664-35388094 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 155 |
| Conread position: | 3-431 |
| Cow position: | chr14:48254846-48255270 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 278 |
| Conread position: | 3-476 |
| Cow position: | chr14:40339175-40338688 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 3-480 |
| Cow position: | chr14:44780449-44780921 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 320 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 3-480 |
| Cow position: | chr14:44782789-44783261 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 320 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 3-482 |
| Cow position: | chr14:45205538-45205062 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 304 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 268, 117 |
| Conread position: | 3-483 |
| Cow position: | chr14:11468065-11467598 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 184 |
| Conread position: | 3-483 |
| Cow position: | chr14:34775061-34774607 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 317 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 35, 103 |
| Conread position: | 4-284 |
| Cow position: | chr14:33235465-33235189 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 6-277 |
| Cow position: | chr14:45079997-45079732 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 6-475 |
| Cow position: | chr14:45712512-45712960 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 142 |
| Conread position: | 11-431 |
| Cow position: | chr14:17684853-17684445 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 61 |
| Conread position: | 11-462 |
| Cow position: | chr14:17001597-17002042 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 177 |
| Conread position: | 12-231 |
| Cow position: | chr14:45850682-45850465 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 12-460 |
| Cow position: | chr14:45833618-45833173 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 22 |
| Conread position: | 12-472 |
| Cow position: | chr14:44685505-44685030 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 432 |
| Conread position: | 13-211 |
| Cow position: | chr14:13778320-13778121 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 13-296 |
| Cow position: | chr14:40170216-40170509 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 14-460 |
| Cow position: | chr14:44551510-44551056 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 240 |
| Conread position: | 14-481 |
| Cow position: | chr14:44580401-44579942 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 321 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 6, 112 |
| Conread position: | 15-431 |
| Cow position: | chr14:41085354-41085738 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 17-473 |
| Cow position: | chr14:35928633-35928179 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 72 |
| Conread position: | 18-432 |
| Cow position: | chr14:44225864-44225444 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 103 |
| Conread position: | 20-455 |
| Cow position: | chr14:14422561-14422985 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 19, 27 |
| Conread position: | 22-239 |
| Cow position: | chr14:46669769-46669557 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 23-484 |
| Cow position: | chr14:46084071-46083614 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 69 |
| Conread position: | 25-208 |
| Cow position: | chr14:15277407-15277597 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 29-217 |
| Cow position: | chr14:13326670-13326858 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-484 |
| Cow position: | chr14:46464230-46463782 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 69 |
| Conread position: | 30-238 |
| Cow position: | chr14:1500193-1499983 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 30-464 |
| Cow position: | chr14:50134349-50133916 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 36-252 |
| Cow position: | chr14:44130359-44130146 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 36-483 |
| Cow position: | chr14:2283420-2282949 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 294 |
| Conread position: | 39-470 |
| Cow position: | chr14:41755302-41754871 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 39 |
| Conread position: | 40-325 |
| Cow position: | chr14:30596940-30597235 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 126, 210 |
| Conread position: | 45-472 |
| Cow position: | chr14:38146062-38145628 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 203, 61 |
| Conread position: | 52-325 |
| Cow position: | chr14:17241651-17241379 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 151, 69 |
| Conread position: | 67-246 |
| Cow position: | chr14:42404347-42404170 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 151, 112 |
| Conread position: | 73-476 |
| Cow position: | chr14:36346167-36346567 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 39, 128 |
| Conread position: | 80-226 |
| Cow position: | chr14:45304121-45304265 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 92 |
| Conread position: | 93-305 |
| Cow position: | chr14:33394428-33394645 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 94-325 |
| Cow position: | chr14:10562006-10561770 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 203-432 |
| Cow position: | chr14:9044723-9044490 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 12 |
| Conread position: | 219-482 |
| Cow position: | chr14:45304378-45304645 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 230-431 |
| Cow position: | chr14:755097-754901 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 132, 51 |
| Conread position: | 262-431 |
| Cow position: | chr14:42404106-42403938 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 290-431 |
| Cow position: | chr14:7831326-7831469 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 308-483 |
| Cow position: | chr14:29049242-29049423 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 308-485 |
| Cow position: | chr14:45030233-45030410 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 125, 50 |
Show alignments to all cow chromosomes.