Cow genome map


           Conread name:
           Ova1-OVRM10105C05
        

               Conread position:
               1-228
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               10, 102
               

               Conread position:
               2-173
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 100
               

               Conread position:
               2-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               37, 87
               

               Conread position:
               2-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               38, 96
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-292
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               38, 49
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 32
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 32
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 132
               

               Conread position:
               2-419
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 299
               

               Conread position:
               2-427
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               297
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               37, 246
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               309
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               37, 121
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               357, 36
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 174
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 32
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 279
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 69
               

               Conread position:
               2-432
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               288
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               37, 216
               

               Conread position:
               2-449
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 126
               

               Conread position:
               2-460
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 345
               

               Conread position:
               2-464
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 341
               

               Conread position:
               2-464
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 99
               

               Conread position:
               2-472
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               318
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               184, 34
               

               Conread position:
               2-474
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 197
               

               Conread position:
               2-475
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 123
               

               Conread position:
               2-476
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               2-483
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 433
               

               Conread position:
               2-485
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 66
               

               Conread position:
               3-240
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 228
               

               Conread position:
               3-472
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 203
               

               Conread position:
               3-480
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               323
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               7-478
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               316
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               10-390
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               273
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               36, 227
               

               Conread position:
               11-474
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 7
               

               Conread position:
               13-225
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               26, 48
               

               Conread position:
               14-195
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               14-325
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               217
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               15-240
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 92
               

               Conread position:
               15-431
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               344, 19
               

               Conread position:
               15-472
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               7, 84
               

               Conread position:
               15-474
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               316
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               23, 86
               

               Conread position:
               15-504
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               353
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               24, 110
               

               Conread position:
               16-325
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 18
               

               Conread position:
               22-473
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 67
               

               Conread position:
               23-431
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               336, 11
               

               Conread position:
               23-431
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 166
               

               Conread position:
               23-481
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 274
               

               Conread position:
               24-416
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 212
               

               Conread position:
               25-325
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               255, 48
               

               Conread position:
               26-286
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               11, 104
               

               Conread position:
               26-483
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               331
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               44, 105
               

               Conread position:
               38-480
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               300
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               153, 84
               

               Conread position:
               47-477
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               313, 90
               

               Conread position:
               51-472
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 46
               

               Conread position:
               52-325
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               59-483
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               144, 157
               

               Conread position:
               79-432
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 18
               

               Conread position:
               84-431
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               97-305
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               183, 0
               

               Conread position:
               155-483
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               157-484
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               203-487
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               157, 74
               

               Conread position:
               215-431
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               56, 42
               

               Conread position:
               223-432
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               57, 12
               

               Conread position:
               244-474
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 58
               

               Conread position:
               245-431
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               114, 29
               

               Conread position:
               308-482
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               54, 71
               

               Conread position:
               310-431
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               314-431
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 59
               
Show alignments to all cow chromosomes.