Cow genome map
| Conread name: | Ova1-OVRM10105C05 |
| Conread position: | 1-226 |
| Cow position: | chr19:39688455-39688235 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 41, 97 |
| Conread position: | 1-325 |
| Cow position: | chr19:685755-685434 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 117 |
| Conread position: | 1-462 |
| Cow position: | chr19:28581742-28582181 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 2-225 |
| Cow position: | chr19:7488223-7487999 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-240 |
| Cow position: | chr19:170830-171071 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 37, 237 |
| Conread position: | 2-255 |
| Cow position: | chr19:30372192-30371931 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 2-283 |
| Cow position: | chr19:32665443-32665162 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 264 |
| Conread position: | 2-325 |
| Cow position: | chr19:7341978-7341653 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 34 |
| Conread position: | 2-325 |
| Cow position: | chr19:28593187-28592871 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 37, 109 |
| Conread position: | 2-346 |
| Cow position: | chr19:377964-378313 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 2-431 |
| Cow position: | chr19:439733-440147 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 255 |
| Conread position: | 2-431 |
| Cow position: | chr19:4385395-4384963 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 217 |
| Conread position: | 2-431 |
| Cow position: | chr19:29209471-29209059 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 2-431 |
| Cow position: | chr19:40852520-40852945 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 279 |
| Conread position: | 2-432 |
| Cow position: | chr19:416563-416150 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 185 |
| Conread position: | 2-460 |
| Cow position: | chr19:261345-260887 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 73 |
| Conread position: | 2-460 |
| Cow position: | chr19:40887736-40888181 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 32 |
| Conread position: | 2-469 |
| Cow position: | chr19:76331-76799 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 20 |
| Conread position: | 2-473 |
| Cow position: | chr19:10672396-10672869 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 279 |
| Conread position: | 2-483 |
| Cow position: | chr19:37806-37299 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 329 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 120, 30 |
| Conread position: | 2-483 |
| Cow position: | chr19:32193487-32192980 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 329 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 37, 154 |
| Conread position: | 2-483 |
| Cow position: | chr19:52152351-52152847 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 91 |
| Conread position: | 2-487 |
| Cow position: | chr19:772509-772006 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 340 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 36, 70 |
| Conread position: | 3-431 |
| Cow position: | chr19:4252447-4252863 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 234 |
| Conread position: | 3-431 |
| Cow position: | chr19:55078657-55078235 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 247 |
| Conread position: | 3-471 |
| Cow position: | chr19:35376466-35376009 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 312 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 104, 178 |
| Conread position: | 3-474 |
| Cow position: | chr19:36477263-36476800 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 3-475 |
| Cow position: | chr19:34331-33857 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 24 |
| Conread position: | 3-486 |
| Cow position: | chr19:6553301-6552838 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 4-460 |
| Cow position: | chr19:35979175-35978724 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 289 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 5-370 |
| Cow position: | chr19:30755085-30754715 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 157 |
| Conread position: | 6-431 |
| Cow position: | chr19:1032012-1031613 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 28 |
| Conread position: | 9-431 |
| Cow position: | chr19:350666-351068 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 25 |
| Conread position: | 11-277 |
| Cow position: | chr19:32183545-32183810 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 260, 7 |
| Conread position: | 11-506 |
| Cow position: | chr19:39390418-39389933 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 14 |
| Conread position: | 12-325 |
| Cow position: | chr19:32212170-32212479 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 268, 22 |
| Conread position: | 12-431 |
| Cow position: | chr19:33941512-33941102 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 242 |
| Conread position: | 12-474 |
| Cow position: | chr19:42649175-42649623 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 304 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 336, 22 |
| Conread position: | 13-432 |
| Cow position: | chr19:172110-171698 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 270 |
| Conread position: | 14-478 |
| Cow position: | chr19:32223529-32223984 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 110 |
| Conread position: | 17-174 |
| Cow position: | chr19:39546523-39546374 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 17-431 |
| Cow position: | chr19:4532848-4533269 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 24-156 |
| Cow position: | chr19:893717-893847 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 24-268 |
| Cow position: | chr19:32244568-32244322 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 24-431 |
| Cow position: | chr19:203852-203451 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 107 |
| Conread position: | 36-318 |
| Cow position: | chr19:43143594-43143307 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 76, 206 |
| Conread position: | 36-431 |
| Cow position: | chr19:33873114-33872729 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 99 |
| Conread position: | 36-475 |
| Cow position: | chr19:32237989-32238396 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 65 |
| Conread position: | 37-325 |
| Cow position: | chr19:548266-547973 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 181, 23 |
| Conread position: | 42-431 |
| Cow position: | chr19:801858-801489 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 20 |
| Conread position: | 63-213 |
| Cow position: | chr19:25622569-25622720 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 72-231 |
| Cow position: | chr19:31341558-31341404 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 77-460 |
| Cow position: | chr19:544056-544455 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 324 |
| Conread position: | 89-480 |
| Cow position: | chr19:27053012-27053391 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 36 |
| Conread position: | 138-474 |
| Cow position: | chr19:561930-562268 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 107, 143 |
| Conread position: | 194-460 |
| Cow position: | chr19:893843-894108 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 108, 86 |
| Conread position: | 219-484 |
| Cow position: | chr19:7487753-7487489 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 143, 62 |
| Conread position: | 232-475 |
| Cow position: | chr19:352963-353203 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 309-432 |
| Cow position: | chr19:32665176-32665051 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 309-484 |
| Cow position: | chr19:39687626-39687445 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 314-475 |
| Cow position: | chr19:30371662-30371499 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 119, 43 |
| Conread position: | 331-475 |
| Cow position: | chr19:24748537-24748386 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.