Cow genome map
| Conread name: | Ova1-OVRM10105C05 |
| Conread position: | 1-134 |
| Cow position: | chr20:35119193-35119059 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-334 |
| Cow position: | chr20:20905318-20905640 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 1-431 |
| Cow position: | chr20:27869065-27868640 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 181 |
| Conread position: | 1-474 |
| Cow position: | chr20:28160648-28160161 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 2-231 |
| Cow position: | chr20:3032796-3032575 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 2-238 |
| Cow position: | chr20:4799784-4800014 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-239 |
| Cow position: | chr20:5560848-5561086 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 215 |
| Conread position: | 2-246 |
| Cow position: | chr20:10846211-10846453 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 37, 178 |
| Conread position: | 2-252 |
| Cow position: | chr20:5484059-5483812 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 2-431 |
| Cow position: | chr20:3252266-3252688 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 186 |
| Conread position: | 2-431 |
| Cow position: | chr20:5534806-5534390 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 35 |
| Conread position: | 2-431 |
| Cow position: | chr20:13762769-13762355 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 22 |
| Conread position: | 2-431 |
| Cow position: | chr20:23469792-23470218 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 278 |
| Conread position: | 2-431 |
| Cow position: | chr20:23798749-23798319 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 124 |
| Conread position: | 2-458 |
| Cow position: | chr20:25851123-25851574 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 241 |
| Conread position: | 2-474 |
| Cow position: | chr20:30684206-30683734 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 277 |
| Conread position: | 2-475 |
| Cow position: | chr20:8313569-8314023 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 32 |
| Conread position: | 2-476 |
| Cow position: | chr20:19437825-19437332 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 344 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 2-481 |
| Cow position: | chr20:21393437-21392965 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 2-483 |
| Cow position: | chr20:15064636-15064134 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 261 |
| Conread position: | 2-484 |
| Cow position: | chr20:10102682-10103161 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 22 |
| Conread position: | 2-484 |
| Cow position: | chr20:11276429-11276900 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 5-433 |
| Cow position: | chr20:13758124-13757702 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 11-484 |
| Cow position: | chr20:12438903-12439362 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 208 |
| Conread position: | 14-225 |
| Cow position: | chr20:28565745-28565957 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 14-431 |
| Cow position: | chr20:21914181-21913781 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 141 |
| Conread position: | 14-432 |
| Cow position: | chr20:7116615-7117029 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 267 |
| Conread position: | 15-431 |
| Cow position: | chr20:8004662-8005070 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 19 |
| Conread position: | 15-474 |
| Cow position: | chr20:28593597-28593132 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 56 |
| Conread position: | 17-243 |
| Cow position: | chr20:24614402-24614174 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 17-433 |
| Cow position: | chr20:2791490-2791924 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 205 |
| Conread position: | 17-478 |
| Cow position: | chr20:2676971-2676523 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 289 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 111, 62 |
| Conread position: | 18-229 |
| Cow position: | chr20:3270568-3270362 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 18-325 |
| Cow position: | chr20:822599-822296 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 262, 18 |
| Conread position: | 22-277 |
| Cow position: | chr20:15098026-15098272 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 200, 12 |
| Conread position: | 23-520 |
| Cow position: | chr20:18315733-18316234 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 94 |
| Conread position: | 33-309 |
| Cow position: | chr20:29948022-29947739 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 36-325 |
| Cow position: | chr20:31124238-31123944 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 167, 180 |
| Conread position: | 55-484 |
| Cow position: | chr20:13681278-13681694 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 47 |
| Conread position: | 73-431 |
| Cow position: | chr20:15291843-15291491 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 207 |
| Conread position: | 83-473 |
| Cow position: | chr20:35119032-35118648 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 75 |
| Conread position: | 98-431 |
| Cow position: | chr20:19005859-19006159 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 261, 38 |
| Conread position: | 220-483 |
| Cow position: | chr20:4799953-4800228 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 11, 176 |
| Conread position: | 279-476 |
| Cow position: | chr20:10846707-10846910 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 314-475 |
| Cow position: | chr20:3032548-3032380 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.