Cow genome map
| Conread name: | Ova1-OVRM10105C05 |
| Conread position: | 1-431 |
| Cow position: | chr23:11778300-11777877 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 166 |
| Conread position: | 1-470 |
| Cow position: | chr23:4509917-4509444 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 19 |
| Conread position: | 2-147 |
| Cow position: | chr23:2313424-2313570 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-182 |
| Cow position: | chr23:8980679-8980856 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 37, 20 |
| Conread position: | 2-227 |
| Cow position: | chr23:2574379-2574153 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 37, 109 |
| Conread position: | 2-246 |
| Cow position: | chr23:5779271-5779517 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-251 |
| Cow position: | chr23:967534-967784 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-252 |
| Cow position: | chr23:2765565-2765803 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 36, 93 |
| Conread position: | 2-269 |
| Cow position: | chr23:31446628-31446361 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 209 |
| Conread position: | 2-295 |
| Cow position: | chr23:4434278-4433991 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 35, 121 |
| Conread position: | 2-325 |
| Cow position: | chr23:4359643-4359322 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 122 |
| Conread position: | 2-325 |
| Cow position: | chr23:19950770-19951100 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-335 |
| Cow position: | chr23:20302025-20301685 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 231 |
| Conread position: | 2-429 |
| Cow position: | chr23:1141370-1140957 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 34 |
| Conread position: | 2-430 |
| Cow position: | chr23:27399317-27398896 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 247 |
| Conread position: | 2-431 |
| Cow position: | chr23:2716165-2715727 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-431 |
| Cow position: | chr23:15220084-15220504 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 119 |
| Conread position: | 2-431 |
| Cow position: | chr23:28913226-28912802 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 253 |
| Conread position: | 2-431 |
| Cow position: | chr23:36031558-36031981 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 32 |
| Conread position: | 2-432 |
| Cow position: | chr23:2795748-2796168 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 279 |
| Conread position: | 2-432 |
| Cow position: | chr23:4276768-4276357 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 32 |
| Conread position: | 2-457 |
| Cow position: | chr23:4640811-4641261 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 234 |
| Conread position: | 2-458 |
| Cow position: | chr23:19489351-19488890 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 32 |
| Conread position: | 2-460 |
| Cow position: | chr23:3881885-3882336 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 22 |
| Conread position: | 2-472 |
| Cow position: | chr23:16617037-16617490 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 2-473 |
| Cow position: | chr23:22147445-22147928 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 343 |
| Conread position: | 2-483 |
| Cow position: | chr23:28217104-28216593 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 119 |
| Conread position: | 2-484 |
| Cow position: | chr23:5874962-5875417 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 23 |
| Conread position: | 3-241 |
| Cow position: | chr23:1330477-1330712 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 3-431 |
| Cow position: | chr23:988826-989238 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 232 |
| Conread position: | 3-463 |
| Cow position: | chr23:19332586-19333052 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 3-483 |
| Cow position: | chr23:31595363-31595837 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 106 |
| Conread position: | 3-504 |
| Cow position: | chr23:1025245-1025739 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 40 |
| Conread position: | 4-483 |
| Cow position: | chr23:3013440-3012973 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 25 |
| Conread position: | 6-225 |
| Cow position: | chr23:16481544-16481761 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 11-431 |
| Cow position: | chr23:15525415-15525012 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 23 |
| Conread position: | 11-458 |
| Cow position: | chr23:2027314-2027764 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 25 |
| Conread position: | 12-431 |
| Cow position: | chr23:4815876-4815472 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 52 |
| Conread position: | 13-216 |
| Cow position: | chr23:30636499-30636703 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 13-238 |
| Cow position: | chr23:19449831-19449599 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 14-481 |
| Cow position: | chr23:34174983-34174533 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 314, 27 |
| Conread position: | 15-268 |
| Cow position: | chr23:7273458-7273208 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 15-476 |
| Cow position: | chr23:2340203-2339747 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 27, 109 |
| Conread position: | 17-278 |
| Cow position: | chr23:22875833-22876091 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 22, 80 |
| Conread position: | 17-481 |
| Cow position: | chr23:19017503-19017056 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 313 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 25-431 |
| Cow position: | chr23:3490720-3491110 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 76 |
| Conread position: | 31-483 |
| Cow position: | chr23:14974984-14975461 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 92 |
| Conread position: | 36-188 |
| Cow position: | chr23:6469496-6469648 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-299 |
| Cow position: | chr23:14966194-14966458 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 199, 191 |
| Conread position: | 77-460 |
| Cow position: | chr23:2757239-2756860 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 206 |
| Conread position: | 96-431 |
| Cow position: | chr23:2045749-2045428 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 139 |
| Conread position: | 98-431 |
| Cow position: | chr23:15176768-15176446 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 150 |
| Conread position: | 183-431 |
| Cow position: | chr23:4888398-4888157 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 119, 44 |
| Conread position: | 219-476 |
| Cow position: | chr23:2573886-2573623 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 245-424 |
| Cow position: | chr23:8981229-8981412 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 279-483 |
| Cow position: | chr23:810670-810461 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 314-483 |
| Cow position: | chr23:5779891-5780057 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 121 |
Show alignments to all cow chromosomes.