Cow genome map


           Conread name:
           Ova1-OVRM10105C05
        

               Conread position:
               1-460
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               2-162
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               2-171
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               2-233
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               37, 215
               

               Conread position:
               2-239
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               209, 35
               

               Conread position:
               2-318
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               278, 32
               

               Conread position:
               2-319
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               2-322
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               35, 76
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               38, 216
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               37, 120
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 215
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 32
               

               Conread position:
               2-430
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 255
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 84
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 27
               

               Conread position:
               2-431
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 32
               

               Conread position:
               2-462
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               2-474
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               2-476
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 278
               

               Conread position:
               2-476
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 99
               

               Conread position:
               2-480
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 32
               

               Conread position:
               2-484
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 258
               

               Conread position:
               2-485
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               40, 70
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               3-231
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               7, 181
               

               Conread position:
               3-275
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               3-325
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               277, 31
               

               Conread position:
               3-351
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               3-395
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 231
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 212
               

               Conread position:
               3-472
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 123
               

               Conread position:
               3-482
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 35
               

               Conread position:
               4-472
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               316
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               222, 34
               

               Conread position:
               9-225
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               10-325
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               11-277
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               11-430
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 191
               

               Conread position:
               14-325
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 203
               

               Conread position:
               14-431
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 130
               

               Conread position:
               15-246
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               16-281
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               115, 18
               

               Conread position:
               17-481
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               304
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               20, 93
               

               Conread position:
               18-432
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 208
               

               Conread position:
               19-473
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               316
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               303, 29
               

               Conread position:
               20-217
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               23-431
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               288
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               16, 84
               

               Conread position:
               23-470
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 80
               

               Conread position:
               24-294
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 224
               

               Conread position:
               24-484
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               36-286
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               243, 136
               

               Conread position:
               36-472
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               321, 74
               

               Conread position:
               41-484
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 239
               

               Conread position:
               47-325
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               233, 107
               

               Conread position:
               65-475
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               51, 163
               

               Conread position:
               66-458
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 177
               

               Conread position:
               67-431
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 20
               

               Conread position:
               71-480
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 89
               

               Conread position:
               106-457
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 175
               

               Conread position:
               173-431
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               189, 75
               

               Conread position:
               206-431
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               156, 42
               

               Conread position:
               219-482
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 20
               

               Conread position:
               279-472
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               154, 16
               

               Conread position:
               308-472
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               54, 0
               
Show alignments to all cow chromosomes.