Cow genome map
| Conread name: | Ova1-OVRM10105C05 |
| Conread position: | 1-460 |
| Cow position: | chr24:33933268-33932791 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 2-162 |
| Cow position: | chr24:8030050-8029889 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-171 |
| Cow position: | chr24:2636019-2635849 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-233 |
| Cow position: | chr24:12485418-12485650 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 37, 215 |
| Conread position: | 2-239 |
| Cow position: | chr24:13188084-13187856 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 209, 35 |
| Conread position: | 2-318 |
| Cow position: | chr24:6645314-6644995 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 278, 32 |
| Conread position: | 2-319 |
| Cow position: | chr24:6083916-6083593 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-322 |
| Cow position: | chr24:33739445-33739769 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 2-325 |
| Cow position: | chr24:6025196-6025526 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 38, 216 |
| Conread position: | 2-325 |
| Cow position: | chr24:6434140-6433808 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-325 |
| Cow position: | chr24:7061001-7060682 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 120 |
| Conread position: | 2-325 |
| Cow position: | chr24:20268117-20267788 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 215 |
| Conread position: | 2-325 |
| Cow position: | chr24:22793073-22792746 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 32 |
| Conread position: | 2-430 |
| Cow position: | chr24:4415624-4416050 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 255 |
| Conread position: | 2-431 |
| Cow position: | chr24:6335598-6335161 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 2-431 |
| Cow position: | chr24:14390826-14391252 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 27 |
| Conread position: | 2-431 |
| Cow position: | chr24:19833280-19832859 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 32 |
| Conread position: | 2-462 |
| Cow position: | chr24:12161778-12161318 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 2-474 |
| Cow position: | chr24:12288827-12289295 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 2-476 |
| Cow position: | chr24:6145259-6144785 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 278 |
| Conread position: | 2-476 |
| Cow position: | chr24:16649401-16649889 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 2-480 |
| Cow position: | chr24:5993078-5993576 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 32 |
| Conread position: | 2-484 |
| Cow position: | chr24:37216632-37216136 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 258 |
| Conread position: | 2-485 |
| Cow position: | chr24:12224581-12225072 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 40, 70 |
| Conread position: | 3-208 |
| Cow position: | chr24:14873443-14873650 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 3-231 |
| Cow position: | chr24:35838725-35838957 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 7, 181 |
| Conread position: | 3-275 |
| Cow position: | chr24:12208039-12207768 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 3-325 |
| Cow position: | chr24:12114138-12114459 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 277, 31 |
| Conread position: | 3-351 |
| Cow position: | chr24:6537457-6537112 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 3-395 |
| Cow position: | chr24:17187444-17187066 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 231 |
| Conread position: | 3-431 |
| Cow position: | chr24:13531635-13532046 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 212 |
| Conread position: | 3-472 |
| Cow position: | chr24:35841715-35842161 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 123 |
| Conread position: | 3-482 |
| Cow position: | chr24:12236952-12236471 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 35 |
| Conread position: | 4-472 |
| Cow position: | chr24:38635634-38635175 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 316 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 222, 34 |
| Conread position: | 9-225 |
| Cow position: | chr24:36560191-36560396 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 10-325 |
| Cow position: | chr24:9188840-9189160 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 116 |
| Conread position: | 11-277 |
| Cow position: | chr24:6048142-6047877 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 11-430 |
| Cow position: | chr24:6352086-6351669 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 279 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 28, 191 |
| Conread position: | 14-325 |
| Cow position: | chr24:44017433-44017116 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 203 |
| Conread position: | 14-431 |
| Cow position: | chr24:14384724-14385135 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 130 |
| Conread position: | 15-246 |
| Cow position: | chr24:13181458-13181682 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 16-281 |
| Cow position: | chr24:36707740-36707480 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 115, 18 |
| Conread position: | 17-481 |
| Cow position: | chr24:6057555-6057099 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 304 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 18-432 |
| Cow position: | chr24:13021557-13021144 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 19-473 |
| Cow position: | chr24:32125625-32126057 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 316 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 303, 29 |
| Conread position: | 20-217 |
| Cow position: | chr24:36297051-36296858 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 68 |
| Conread position: | 23-431 |
| Cow position: | chr24:37301199-37301574 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 16, 84 |
| Conread position: | 23-470 |
| Cow position: | chr24:15392425-15392879 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 24-294 |
| Cow position: | chr24:12086077-12085810 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 224 |
| Conread position: | 24-484 |
| Cow position: | chr24:12797883-12798340 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 79 |
| Conread position: | 36-286 |
| Cow position: | chr24:35990791-35991038 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 243, 136 |
| Conread position: | 36-472 |
| Cow position: | chr24:1447434-1447006 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 321, 74 |
| Conread position: | 41-484 |
| Cow position: | chr24:29186665-29186218 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 239 |
| Conread position: | 47-325 |
| Cow position: | chr24:7712445-7712721 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 233, 107 |
| Conread position: | 65-475 |
| Cow position: | chr24:32331182-32330771 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 163 |
| Conread position: | 66-458 |
| Cow position: | chr24:17314479-17314873 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 177 |
| Conread position: | 67-431 |
| Cow position: | chr24:14583930-14583588 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 20 |
| Conread position: | 71-480 |
| Cow position: | chr24:148763-149170 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 89 |
| Conread position: | 106-457 |
| Cow position: | chr24:12131687-12132038 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 175 |
| Conread position: | 173-431 |
| Cow position: | chr24:9544554-9544305 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 189, 75 |
| Conread position: | 206-431 |
| Cow position: | chr24:6357706-6357492 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 156, 42 |
| Conread position: | 219-482 |
| Cow position: | chr24:6083656-6083390 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 279-472 |
| Cow position: | chr24:36707252-36707058 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 154, 16 |
| Conread position: | 308-472 |
| Cow position: | chr24:36560641-36560808 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.