Cow genome map
| Conread name: | Ova1-OVRM10105C05 |
| Conread position: | 1-216 |
| Cow position: | chr25:12943581-12943796 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 1-427 |
| Cow position: | chr25:11933667-11934107 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 304 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 1-484 |
| Cow position: | chr25:13780892-13780410 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 2-242 |
| Cow position: | chr25:20629433-20629192 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-255 |
| Cow position: | chr25:18027773-18028023 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 37, 113 |
| Conread position: | 2-295 |
| Cow position: | chr25:26922087-26921788 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-325 |
| Cow position: | chr25:19916939-19916616 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 35, 120 |
| Conread position: | 2-325 |
| Cow position: | chr25:20777041-20777371 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-431 |
| Cow position: | chr25:22147350-22146930 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 57 |
| Conread position: | 2-432 |
| Cow position: | chr25:34347136-34347558 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 2-474 |
| Cow position: | chr25:18092875-18092398 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 124 |
| Conread position: | 2-475 |
| Cow position: | chr25:18302634-18302157 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 158 |
| Conread position: | 2-476 |
| Cow position: | chr25:18421504-18421043 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 92 |
| Conread position: | 3-372 |
| Cow position: | chr25:25506507-25506140 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 280 |
| Conread position: | 3-472 |
| Cow position: | chr25:11375491-11375947 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 233 |
| Conread position: | 4-477 |
| Cow position: | chr25:24171882-24171421 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 323 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 6-211 |
| Cow position: | chr25:34656593-34656799 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 6-431 |
| Cow position: | chr25:26867077-26866658 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 277 |
| Conread position: | 9-431 |
| Cow position: | chr25:17468847-17469258 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 22 |
| Conread position: | 10-322 |
| Cow position: | chr25:17589700-17590013 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 11-431 |
| Cow position: | chr25:26279113-26278708 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 138 |
| Conread position: | 11-480 |
| Cow position: | chr25:12759748-12760225 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 312 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 125, 248 |
| Conread position: | 11-484 |
| Cow position: | chr25:18890168-18890631 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 162 |
| Conread position: | 12-480 |
| Cow position: | chr25:18275978-18276464 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 127 |
| Conread position: | 12-481 |
| Cow position: | chr25:8674761-8674308 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 124 |
| Conread position: | 13-483 |
| Cow position: | chr25:33991211-33991688 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 316 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 14-432 |
| Cow position: | chr25:32579811-32579382 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 14-510 |
| Cow position: | chr25:18255509-18255994 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 324 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 6, 205 |
| Conread position: | 15-460 |
| Cow position: | chr25:19288504-19288946 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 298 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 24, 107 |
| Conread position: | 16-270 |
| Cow position: | chr25:18411449-18411694 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 16-325 |
| Cow position: | chr25:35362577-35362892 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 23, 201 |
| Conread position: | 17-228 |
| Cow position: | chr25:14016017-14015806 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-432 |
| Cow position: | chr25:20494197-20493796 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 16, 200 |
| Conread position: | 52-431 |
| Cow position: | chr25:34014541-34014913 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 104 |
| Conread position: | 54-476 |
| Cow position: | chr25:18173138-18172696 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 13 |
| Conread position: | 64-346 |
| Cow position: | chr25:17563111-17563395 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 136 |
| Conread position: | 64-456 |
| Cow position: | chr25:17560802-17561208 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 136 |
| Conread position: | 82-278 |
| Cow position: | chr25:32978983-32979180 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 121, 134 |
| Conread position: | 206-431 |
| Cow position: | chr25:36239880-36239659 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 73, 89 |
| Conread position: | 230-483 |
| Cow position: | chr25:18411612-18411865 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 191 |
Show alignments to all cow chromosomes.