Cow genome map
| Conread name: | Ova1-OVRM10105C05 |
| Conread position: | 2-169 |
| Cow position: | chr26:11536955-11537123 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 60, 34 |
| Conread position: | 2-232 |
| Cow position: | chr26:15144880-15145111 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 36, 217 |
| Conread position: | 2-255 |
| Cow position: | chr26:4605305-4605558 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 86 |
| Conread position: | 2-277 |
| Cow position: | chr26:5675047-5674771 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 201 |
| Conread position: | 2-277 |
| Cow position: | chr26:20254947-20254683 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 2-325 |
| Cow position: | chr26:9112343-9112014 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-325 |
| Cow position: | chr26:12588688-12589012 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 109 |
| Conread position: | 2-325 |
| Cow position: | chr26:24201496-24201170 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 32 |
| Conread position: | 2-325 |
| Cow position: | chr26:30782642-30782317 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 278, 32 |
| Conread position: | 2-431 |
| Cow position: | chr26:3691683-3691276 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 233 |
| Conread position: | 2-431 |
| Cow position: | chr26:12574520-12574922 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 2-431 |
| Cow position: | chr26:19351636-19352061 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 279 |
| Conread position: | 2-432 |
| Cow position: | chr26:3030933-3031385 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 313 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 70 |
| Conread position: | 2-462 |
| Cow position: | chr26:9563481-9563938 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 279 |
| Conread position: | 3-433 |
| Cow position: | chr26:6516732-6516313 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 25 |
| Conread position: | 3-472 |
| Cow position: | chr26:23605020-23605476 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 175 |
| Conread position: | 3-474 |
| Cow position: | chr26:9850748-9851240 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 193 |
| Conread position: | 3-479 |
| Cow position: | chr26:9854214-9854709 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 191 |
| Conread position: | 4-302 |
| Cow position: | chr26:3074403-3074110 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 10-239 |
| Cow position: | chr26:18854957-18854734 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 29, 114 |
| Conread position: | 11-431 |
| Cow position: | chr26:17397063-17397484 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 12-316 |
| Cow position: | chr26:8869744-8869436 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 23, 261 |
| Conread position: | 12-318 |
| Cow position: | chr26:2352491-2352793 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 12-431 |
| Cow position: | chr26:2198494-2198065 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 13-483 |
| Cow position: | chr26:11254191-11254697 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 336 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 27, 209 |
| Conread position: | 15-325 |
| Cow position: | chr26:19998351-19998035 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 25, 202 |
| Conread position: | 20-407 |
| Cow position: | chr26:8283182-8283562 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 24, 239 |
| Conread position: | 23-481 |
| Cow position: | chr26:9846278-9846742 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 239 |
| Conread position: | 47-429 |
| Cow position: | chr26:20262679-20262330 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 313, 23 |
| Conread position: | 51-287 |
| Cow position: | chr26:12655778-12655546 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 171, 67 |
| Conread position: | 74-483 |
| Cow position: | chr26:34012824-34012413 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 177 |
| Conread position: | 77-431 |
| Cow position: | chr26:30590439-30590788 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 202 |
| Conread position: | 84-431 |
| Cow position: | chr26:35150078-35150402 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 92-231 |
| Cow position: | chr26:19142507-19142371 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 103-325 |
| Cow position: | chr26:8918760-8918535 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 177, 8 |
| Conread position: | 121-483 |
| Cow position: | chr26:28424174-28424544 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 100, 35 |
| Conread position: | 174-424 |
| Cow position: | chr26:17325070-17324827 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 128, 98 |
| Conread position: | 206-472 |
| Cow position: | chr26:6601649-6601387 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 47 |
| Conread position: | 314-431 |
| Cow position: | chr26:5674465-5674346 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 314-431 |
| Cow position: | chr26:6850704-6850823 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.