Cow genome map
Conread name: | Ova1-OVRM10105C05 |
Conread position: | 1-226 |
Cow position: | chr28:17330663-17330899 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 171 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 38, 19 |
Conread position: | 1-431 |
Cow position: | chr28:10582126-10582548 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 247 |
Conread position: | 1-431 |
Cow position: | chr28:34593702-34593278 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 282 |
Conread position: | 1-483 |
Cow position: | chr28:21325649-21325161 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 167 |
Conread position: | 2-156 |
Cow position: | chr28:4380961-4381106 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 127 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 37, 21 |
Conread position: | 2-195 |
Cow position: | chr28:24587291-24587100 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 146 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 37, 122 |
Conread position: | 2-209 |
Cow position: | chr28:7822115-7821915 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 156 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 20, 108 |
Conread position: | 2-215 |
Cow position: | chr28:1815010-1815223 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 164 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-238 |
Cow position: | chr28:9953994-9953756 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 178 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 2-325 |
Cow position: | chr28:1952988-1952672 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 228 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 246, 32 |
Conread position: | 2-325 |
Cow position: | chr28:13441019-13441348 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 2-325 |
Cow position: | chr28:15950839-15950510 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 215 |
Conread position: | 2-431 |
Cow position: | chr28:7001846-7001436 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 187 |
Conread position: | 2-431 |
Cow position: | chr28:17388339-17387914 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 279 |
Conread position: | 2-431 |
Cow position: | chr28:22261293-22261714 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 279 |
Conread position: | 2-431 |
Cow position: | chr28:29819428-29819007 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 247 |
Conread position: | 2-431 |
Cow position: | chr28:32792521-32792940 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 279 |
Conread position: | 2-435 |
Cow position: | chr28:14750406-14749969 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 317 |
Conread position: | 2-462 |
Cow position: | chr28:17667654-17668114 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 279 |
Conread position: | 2-474 |
Cow position: | chr28:14705814-14706282 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 357, 278 |
Conread position: | 2-475 |
Cow position: | chr28:1387537-1388005 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 249, 17 |
Conread position: | 2-476 |
Cow position: | chr28:10619249-10619724 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 21 |
Conread position: | 2-484 |
Cow position: | chr28:3192933-3193399 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 85 |
Conread position: | 2-484 |
Cow position: | chr28:5565719-5565234 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 279 |
Conread position: | 2-484 |
Cow position: | chr28:5812566-5812082 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 27 |
Conread position: | 2-485 |
Cow position: | chr28:8721587-8722086 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 32 |
Conread position: | 3-431 |
Cow position: | chr28:2591775-2591377 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 36 |
Conread position: | 3-431 |
Cow position: | chr28:13522586-13522171 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 248 |
Conread position: | 3-472 |
Cow position: | chr28:22827909-22827446 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 17 |
Conread position: | 3-473 |
Cow position: | chr28:8378423-8377950 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 33 |
Conread position: | 3-476 |
Cow position: | chr28:18089147-18089618 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 306 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 91, 42 |
Conread position: | 3-481 |
Cow position: | chr28:21358873-21358394 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 24 |
Conread position: | 3-497 |
Cow position: | chr28:5796674-5796181 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 28 |
Conread position: | 5-252 |
Cow position: | chr28:580765-581003 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 167 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 20, 32 |
Conread position: | 10-294 |
Cow position: | chr28:15920616-15920899 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 205 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 27, 115 |
Conread position: | 11-431 |
Cow position: | chr28:782247-781830 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 271 |
Conread position: | 11-431 |
Cow position: | chr28:1168315-1168731 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 270 |
Conread position: | 11-431 |
Cow position: | chr28:18520612-18521033 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 270 |
Conread position: | 12-304 |
Cow position: | chr28:9155437-9155712 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 219 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 27, 58 |
Conread position: | 12-325 |
Cow position: | chr28:6780481-6780798 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 225 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 27, 64 |
Conread position: | 12-431 |
Cow position: | chr28:2083452-2083037 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 269 |
Conread position: | 12-431 |
Cow position: | chr28:13459819-13459407 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 126 |
Conread position: | 12-484 |
Cow position: | chr28:26426426-26426884 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 290, 32 |
Conread position: | 13-228 |
Cow position: | chr28:7901198-7900991 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 161 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 15-478 |
Cow position: | chr28:15585235-15584785 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 305 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 235, 10 |
Conread position: | 16-431 |
Cow position: | chr28:26007877-26007469 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 40 |
Conread position: | 16-459 |
Cow position: | chr28:12150163-12149730 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 18 |
Conread position: | 16-511 |
Cow position: | chr28:34648780-34648302 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 75 |
Conread position: | 17-184 |
Cow position: | chr28:14491306-14491140 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 119 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 22, 111 |
Conread position: | 17-475 |
Cow position: | chr28:15681736-15681299 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 219 |
Conread position: | 17-481 |
Cow position: | chr28:6657501-6657957 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 287 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 343, 84 |
Conread position: | 28-431 |
Cow position: | chr28:5115248-5115639 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 161 |
Conread position: | 35-520 |
Cow position: | chr28:7817055-7816586 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 327, 35 |
Conread position: | 55-484 |
Cow position: | chr28:7790435-7790858 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 88 |
Conread position: | 63-325 |
Cow position: | chr28:489286-489019 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 196 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 217, 254 |
Conread position: | 74-431 |
Cow position: | chr28:33252129-33251752 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 0 |
Conread position: | 77-225 |
Cow position: | chr28:9137246-9137394 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 77-431 |
Cow position: | chr28:5752378-5752727 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 204 |
Conread position: | 77-467 |
Cow position: | chr28:7740037-7739650 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 204 |
Conread position: | 77-476 |
Cow position: | chr28:2990184-2990586 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 41 |
Conread position: | 82-431 |
Cow position: | chr28:1504418-1504074 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 196 |
Conread position: | 83-431 |
Cow position: | chr28:15035640-15035983 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 197 |
Conread position: | 87-476 |
Cow position: | chr28:10464077-10464459 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 255 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 273, 15 |
Conread position: | 89-431 |
Cow position: | chr28:15378244-15378581 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 191 |
Conread position: | 93-485 |
Cow position: | chr28:24667380-24666984 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 185 |
Conread position: | 117-431 |
Cow position: | chr28:5936762-5936455 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 211 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 185, 91 |
Conread position: | 139-484 |
Cow position: | chr28:28973506-28973843 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 241 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 163, 92 |
Conread position: | 242-476 |
Cow position: | chr28:13721588-13721345 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 166 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 18, 39 |
Conread position: | 245-430 |
Cow position: | chr28:5245170-5244990 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 133 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 114, 36 |
Conread position: | 314-431 |
Cow position: | chr28:9953716-9953597 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 97 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.