Cow genome map
| Conread name: | Ova1-OVRM10105C05 |
| Conread position: | 1-272 |
| Cow position: | chr29:14013297-14013027 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 91 |
| Conread position: | 2-223 |
| Cow position: | chr29:7840620-7840400 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 109 |
| Conread position: | 2-231 |
| Cow position: | chr29:12796642-12796869 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 2-270 |
| Cow position: | chr29:31121629-31121363 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 37, 68 |
| Conread position: | 2-275 |
| Cow position: | chr29:9643900-9644171 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 32 |
| Conread position: | 2-325 |
| Cow position: | chr29:15895027-15895351 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 201, 32 |
| Conread position: | 2-325 |
| Cow position: | chr29:16109553-16109223 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 2-326 |
| Cow position: | chr29:28060842-28061172 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 37, 215 |
| Conread position: | 2-431 |
| Cow position: | chr29:48652-49077 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 279 |
| Conread position: | 2-431 |
| Cow position: | chr29:2099668-2099245 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 139 |
| Conread position: | 2-431 |
| Cow position: | chr29:6266670-6267094 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 2-431 |
| Cow position: | chr29:7431392-7431817 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 279 |
| Conread position: | 2-431 |
| Cow position: | chr29:10648424-10648846 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 32 |
| Conread position: | 2-431 |
| Cow position: | chr29:10848287-10848697 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 2-431 |
| Cow position: | chr29:11049106-11048690 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 2-431 |
| Cow position: | chr29:15950360-15950774 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 293 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 2-431 |
| Cow position: | chr29:19652932-19652507 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 279 |
| Conread position: | 2-431 |
| Cow position: | chr29:26164999-26165419 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 2-431 |
| Cow position: | chr29:34799986-34800390 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 32 |
| Conread position: | 2-431 |
| Cow position: | chr29:35196497-35196106 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 357, 22 |
| Conread position: | 2-431 |
| Cow position: | chr29:38226817-38226393 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 2-431 |
| Cow position: | chr29:39079882-39080307 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 279 |
| Conread position: | 2-432 |
| Cow position: | chr29:15969324-15969774 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 37, 326 |
| Conread position: | 2-432 |
| Cow position: | chr29:45459540-45459122 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 32 |
| Conread position: | 2-448 |
| Cow position: | chr29:2841545-2841975 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 22 |
| Conread position: | 2-460 |
| Cow position: | chr29:5957426-5956956 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 2-460 |
| Cow position: | chr29:19623423-19623878 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 31 |
| Conread position: | 2-472 |
| Cow position: | chr29:16769956-16769509 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 2-476 |
| Cow position: | chr29:13578241-13577745 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 329 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 37, 91 |
| Conread position: | 2-483 |
| Cow position: | chr29:35296698-35296211 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 32 |
| Conread position: | 2-484 |
| Cow position: | chr29:43322383-43321890 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 311 |
| Conread position: | 3-305 |
| Cow position: | chr29:32315863-32315557 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 36, 129 |
| Conread position: | 3-474 |
| Cow position: | chr29:30811355-30810913 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 31 |
| Conread position: | 11-431 |
| Cow position: | chr29:2689717-2689320 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 23 |
| Conread position: | 11-431 |
| Cow position: | chr29:16022345-16021932 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 292 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 148, 75 |
| Conread position: | 11-431 |
| Cow position: | chr29:25932729-25933145 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 270 |
| Conread position: | 11-431 |
| Cow position: | chr29:40503164-40503580 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 270 |
| Conread position: | 11-458 |
| Cow position: | chr29:20250974-20250527 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 270 |
| Conread position: | 11-483 |
| Cow position: | chr29:803512-803984 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 311 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 101, 30 |
| Conread position: | 12-325 |
| Cow position: | chr29:610798-611118 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 12-431 |
| Cow position: | chr29:23975646-23975232 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 145 |
| Conread position: | 12-431 |
| Cow position: | chr29:45587484-45587899 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 269 |
| Conread position: | 12-484 |
| Cow position: | chr29:21246382-21245913 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 269 |
| Conread position: | 13-325 |
| Cow position: | chr29:27250522-27250837 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 13-431 |
| Cow position: | chr29:32539623-32539210 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 108 |
| Conread position: | 14-431 |
| Cow position: | chr29:10824150-10824557 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 22 |
| Conread position: | 15-305 |
| Cow position: | chr29:14368758-14368461 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 22, 209 |
| Conread position: | 16-472 |
| Cow position: | chr29:32891019-32890563 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 304 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 74, 27 |
| Conread position: | 20-431 |
| Cow position: | chr29:27040954-27041348 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 216 |
| Conread position: | 23-498 |
| Cow position: | chr29:104378-103910 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 18 |
| Conread position: | 26-483 |
| Cow position: | chr29:2750587-2751040 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 35-474 |
| Cow position: | chr29:34751903-34752320 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 84 |
| Conread position: | 39-431 |
| Cow position: | chr29:21543589-21543957 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 373, 67 |
| Conread position: | 41-233 |
| Cow position: | chr29:43366213-43366399 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 107-483 |
| Cow position: | chr29:21431624-21432010 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 13 |
| Conread position: | 115-472 |
| Cow position: | chr29:8663987-8663639 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 136 |
| Conread position: | 122-487 |
| Cow position: | chr29:32640507-32640144 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 86 |
| Conread position: | 137-511 |
| Cow position: | chr29:42650051-42649678 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 142, 116 |
| Conread position: | 137-511 |
| Cow position: | chr29:42801911-42801538 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 142, 116 |
| Conread position: | 203-474 |
| Cow position: | chr29:45464149-45464424 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 279-484 |
| Cow position: | chr29:9644609-9644809 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 281-431 |
| Cow position: | chr29:22318396-22318548 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 308-483 |
| Cow position: | chr29:19884743-19884562 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 340-474 |
| Cow position: | chr29:43366696-43366836 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.