Cow genome map

Conread name: Ova1-OVRM10105C05

Conread position: 1-431
Cow position:
Alignm length: 433
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 33

Conread position: 1-431
Cow position:
Alignm length: 435
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 280

Conread position: 1-473
Cow position:
Alignm length: 477
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 33

Conread position: 2-119
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 106

Conread position: 2-228
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 38, 97

Conread position: 2-241
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 119, 32

Conread position: 2-241
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 37, 128

Conread position: 2-246
Cow position:
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 2-279
Cow position:
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 2-296
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 35, 99

Conread position: 2-305
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 2-318
Cow position:
Alignm length: 325
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 131

Conread position: 2-318
Cow position:
Alignm length: 324
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 2-325
Cow position:
Alignm length: 331
Alignm identity: 230
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 37, 238

Conread position: 2-325
Cow position:
Alignm length: 331
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 215

Conread position: 2-325
Cow position:
Alignm length: 330
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 12

Conread position: 2-325
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 124, 32

Conread position: 2-325
Cow position:
Alignm length: 337
Alignm identity: 234
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 208, 32

Conread position: 2-325
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 215

Conread position: 2-325
Cow position:
Alignm length: 329
Alignm identity: 227
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 37, 215

Conread position: 2-325
Cow position:
Alignm length: 330
Alignm identity: 230
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 37, 123

Conread position: 2-325
Cow position:
Alignm length: 331
Alignm identity: 228
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 38, 215

Conread position: 2-325
Cow position:
Alignm length: 333
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 169

Conread position: 2-325
Cow position:
Alignm length: 331
Alignm identity: 226
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 101

Conread position: 2-325
Cow position:
Alignm length: 331
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 257

Conread position: 2-424
Cow position:
Alignm length: 442
Alignm identity: 301
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 104, 22

Conread position: 2-431
Cow position:
Alignm length: 434
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 279

Conread position: 2-431
Cow position:
Alignm length: 432
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 232

Conread position: 2-431
Cow position:
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 280

Conread position: 2-431
Cow position:
Alignm length: 433
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 44

Conread position: 2-431
Cow position:
Alignm length: 434
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 23

Conread position: 2-431
Cow position:
Alignm length: 433
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 198

Conread position: 2-431
Cow position:
Alignm length: 437
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 32

Conread position: 2-431
Cow position:
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 2-432
Cow position:
Alignm length: 443
Alignm identity: 293
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 169

Conread position: 2-432
Cow position:
Alignm length: 434
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 246

Conread position: 2-458
Cow position:
Alignm length: 471
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 54

Conread position: 2-460
Cow position:
Alignm length: 472
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 27

Conread position: 2-462
Cow position:
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 134

Conread position: 2-462
Cow position:
Alignm length: 467
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 183

Conread position: 2-462
Cow position:
Alignm length: 467
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 183

Conread position: 2-470
Cow position:
Alignm length: 477
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 30

Conread position: 2-472
Cow position:
Alignm length: 477
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 22

Conread position: 2-474
Cow position:
Alignm length: 480
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 162

Conread position: 2-476
Cow position:
Alignm length: 496
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 114

Conread position: 2-481
Cow position:
Alignm length: 487
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 32

Conread position: 2-481
Cow position:
Alignm length: 489
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 186

Conread position: 2-481
Cow position:
Alignm length: 487
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 178

Conread position: 2-483
Cow position:
Alignm length: 510
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 134

Conread position: 2-483
Cow position:
Alignm length: 490
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 21

Conread position: 2-484
Cow position:
Alignm length: 492
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 89

Conread position: 2-484
Cow position:
Alignm length: 498
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 97

Conread position: 2-506
Cow position:
Alignm length: 513
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 27

Conread position: 3-278
Cow position:
Alignm length: 281
Alignm identity: 187
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 89

Conread position: 3-280
Cow position:
Alignm length: 281
Alignm identity: 187
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 119

Conread position: 3-480
Cow position:
Alignm length: 487
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 21

Conread position: 4-465
Cow position:
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 183

Conread position: 9-246
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 15, 0

Conread position: 9-432
Cow position:
Alignm length: 431
Alignm identity: 298
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 14

Conread position: 10-459
Cow position:
Alignm length: 471
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 95

Conread position: 10-483
Cow position:
Alignm length: 499
Alignm identity: 329
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 114, 14

Conread position: 11-224
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 0

Conread position: 11-246
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 11-325
Cow position:
Alignm length: 322
Alignm identity: 223
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 119

Conread position: 11-432
Cow position:
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 165

Conread position: 11-484
Cow position:
Alignm length: 484
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 75

Conread position: 12-274
Cow position:
Alignm length: 263
Alignm identity: 190
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 12-277
Cow position:
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 12-325
Cow position:
Alignm length: 333
Alignm identity: 230
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 12-407
Cow position:
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 12-431
Cow position:
Alignm length: 425
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 12

Conread position: 12-431
Cow position:
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 22

Conread position: 12-432
Cow position:
Alignm length: 433
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 210

Conread position: 13-325
Cow position:
Alignm length: 320
Alignm identity: 225
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 80

Conread position: 13-325
Cow position:
Alignm length: 319
Alignm identity: 224
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 26, 107

Conread position: 13-431
Cow position:
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 273

Conread position: 13-483
Cow position:
Alignm length: 497
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 21

Conread position: 14-431
Cow position:
Alignm length: 422
Alignm identity: 289
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 25, 49

Conread position: 14-459
Cow position:
Alignm length: 453
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 162

Conread position: 15-464
Cow position:
Alignm length: 458
Alignm identity: 301
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 184, 95

Conread position: 18-431
Cow position:
Alignm length: 416
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 183

Conread position: 24-277
Cow position:
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 24-480
Cow position:
Alignm length: 462
Alignm identity: 292
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 335, 32

Conread position: 24-505
Cow position:
Alignm length: 489
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 91

Conread position: 26-474
Cow position:
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 175

Conread position: 36-279
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 5, 0

Conread position: 36-395
Cow position:
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 99

Conread position: 36-476
Cow position:
Alignm length: 447
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 326, 214

Conread position: 42-325
Cow position:
Alignm length: 302
Alignm identity: 215
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 73, 104

Conread position: 42-431
Cow position:
Alignm length: 392
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 54

Conread position: 73-431
Cow position:
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 174

Conread position: 77-228
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 77-443
Cow position:
Alignm length: 374
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 112

Conread position: 92-246
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 142, 45

Conread position: 106-431
Cow position:
Alignm length: 331
Alignm identity: 233
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 19, 33

Conread position: 114-431
Cow position:
Alignm length: 324
Alignm identity: 224
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 155, 87

Conread position: 140-431
Cow position:
Alignm length: 299
Alignm identity: 202
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 150, 78

Conread position: 140-498
Cow position:
Alignm length: 365
Alignm identity: 240
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 220, 77

Conread position: 144-473
Cow position:
Alignm length: 339
Alignm identity: 228
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 158, 136

Conread position: 197-431
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 162, 83

Conread position: 219-431
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 143, 23

Conread position: 308-432
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 308-479
Cow position:
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 308-499
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 174

Show alignments to all cow chromosomes.