Cow genome map
| Conread name: | Ova1-OVRM10105C05 | 
| Conread position: | 1-431 | 
| Cow position: | chr6:27530218-27530637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 358, 33 | 
| Conread position: | 1-431 | 
| Cow position: | chr6:55544543-55544969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 280 | 
| Conread position: | 1-473 | 
| Cow position: | chr6:27469039-27468583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 358, 33 | 
| Conread position: | 2-119 | 
| Cow position: | chr6:37115921-37115803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 26, 106 | 
| Conread position: | 2-228 | 
| Cow position: | chr6:59919496-59919718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 38, 97 | 
| Conread position: | 2-241 | 
| Cow position: | chr6:13943694-13943456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 119, 32 | 
| Conread position: | 2-241 | 
| Cow position: | chr6:58409127-58409365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 37, 128 | 
| Conread position: | 2-246 | 
| Cow position: | chr6:701736-701490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 2-279 | 
| Cow position: | chr6:6566395-6566117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 2-296 | 
| Cow position: | chr6:65909209-65908916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 35, 99 | 
| Conread position: | 2-305 | 
| Cow position: | chr6:34127134-34126825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 2-318 | 
| Cow position: | chr6:40275041-40274718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 131 | 
| Conread position: | 2-318 | 
| Cow position: | chr6:68026564-68026242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 22 | 
| Conread position: | 2-325 | 
| Cow position: | chr6:2554490-2554165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 37, 238 | 
| Conread position: | 2-325 | 
| Cow position: | chr6:6935342-6935671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 38, 215 | 
| Conread position: | 2-325 | 
| Cow position: | chr6:13103840-13103513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 12 | 
| Conread position: | 2-325 | 
| Cow position: | chr6:17598497-17598827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 124, 32 | 
| Conread position: | 2-325 | 
| Cow position: | chr6:26671081-26671411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 208, 32 | 
| Conread position: | 2-325 | 
| Cow position: | chr6:27169359-27169030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 215 | 
| Conread position: | 2-325 | 
| Cow position: | chr6:28491731-28492057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 37, 215 | 
| Conread position: | 2-325 | 
| Cow position: | chr6:39907932-39907610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 37, 123 | 
| Conread position: | 2-325 | 
| Cow position: | chr6:41757203-41757530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 38, 215 | 
| Conread position: | 2-325 | 
| Cow position: | chr6:43617499-43617169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 169 | 
| Conread position: | 2-325 | 
| Cow position: | chr6:45672047-45671723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 38, 101 | 
| Conread position: | 2-325 | 
| Cow position: | chr6:57870221-57870550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 257 | 
| Conread position: | 2-424 | 
| Cow position: | chr6:33388616-33388209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 104, 22 | 
| Conread position: | 2-431 | 
| Cow position: | chr6:8201515-8201090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 279 | 
| Conread position: | 2-431 | 
| Cow position: | chr6:15141393-15141812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 360, 232 | 
| Conread position: | 2-431 | 
| Cow position: | chr6:15280759-15281185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 280 | 
| Conread position: | 2-431 | 
| Cow position: | chr6:20561327-20561742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 44 | 
| Conread position: | 2-431 | 
| Cow position: | chr6:28274766-28274350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 300, 23 | 
| Conread position: | 2-431 | 
| Cow position: | chr6:36525825-36525403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 198 | 
| Conread position: | 2-431 | 
| Cow position: | chr6:39437423-39436996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 278, 32 | 
| Conread position: | 2-431 | 
| Cow position: | chr6:50497676-50498091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 62 | 
| Conread position: | 2-432 | 
| Cow position: | chr6:13978305-13977868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 37, 169 | 
| Conread position: | 2-432 | 
| Cow position: | chr6:24238830-24238408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 246 | 
| Conread position: | 2-458 | 
| Cow position: | chr6:65880649-65880187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 54 | 
| Conread position: | 2-460 | 
| Cow position: | chr6:30478874-30478410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 278, 27 | 
| Conread position: | 2-462 | 
| Cow position: | chr6:5951454-5951913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 134 | 
| Conread position: | 2-462 | 
| Cow position: | chr6:64713331-64712877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 183 | 
| Conread position: | 2-462 | 
| Cow position: | chr6:64714898-64714444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 183 | 
| Conread position: | 2-470 | 
| Cow position: | chr6:21686675-21686216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 300, 30 | 
| Conread position: | 2-472 | 
| Cow position: | chr6:19453705-19453255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 357, 22 | 
| Conread position: | 2-474 | 
| Cow position: | chr6:10054397-10053952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 162 | 
| Conread position: | 2-476 | 
| Cow position: | chr6:44150775-44151266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 114 | 
| Conread position: | 2-481 | 
| Cow position: | chr6:1823467-1823937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 300, 32 | 
| Conread position: | 2-481 | 
| Cow position: | chr6:3278168-3278646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 186 | 
| Conread position: | 2-481 | 
| Cow position: | chr6:34893227-34893702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 178 | 
| Conread position: | 2-483 | 
| Cow position: | chr6:1405454-1405958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 134 | 
| Conread position: | 2-483 | 
| Cow position: | chr6:11277918-11278391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 256, 21 | 
| Conread position: | 2-484 | 
| Cow position: | chr6:6476671-6477147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 89 | 
| Conread position: | 2-484 | 
| Cow position: | chr6:38232058-38231567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 498 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 97 | 
| Conread position: | 2-506 | 
| Cow position: | chr6:12093080-12093575 (view UCSC Genome Browser custom track) | 
| Alignm length: | 513 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 278, 27 | 
| Conread position: | 3-278 | 
| Cow position: | chr6:52804197-52803927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 37, 89 | 
| Conread position: | 3-280 | 
| Cow position: | chr6:1384062-1384338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 20, 119 | 
| Conread position: | 3-480 | 
| Cow position: | chr6:7179897-7180356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 260, 21 | 
| Conread position: | 4-465 | 
| Cow position: | chr6:35876936-35877396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 183 | 
| Conread position: | 9-246 | 
| Cow position: | chr6:68362544-68362777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 9-432 | 
| Cow position: | chr6:42927160-42926761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 29, 14 | 
| Conread position: | 10-459 | 
| Cow position: | chr6:33459361-33458898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 95 | 
| Conread position: | 10-483 | 
| Cow position: | chr6:28063112-28062621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 114, 14 | 
| Conread position: | 11-224 | 
| Cow position: | chr6:8761527-8761741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 11-246 | 
| Cow position: | chr6:65927710-65927483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 11-325 | 
| Cow position: | chr6:40314676-40314371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 32, 119 | 
| Conread position: | 11-432 | 
| Cow position: | chr6:21971447-21971035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 165 | 
| Conread position: | 11-484 | 
| Cow position: | chr6:3488627-3489094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 75 | 
| Conread position: | 12-274 | 
| Cow position: | chr6:42723152-42723403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 12-277 | 
| Cow position: | chr6:17045834-17045570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 17 | 
| Conread position: | 12-325 | 
| Cow position: | chr6:331693-332025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 12-407 | 
| Cow position: | chr6:47043659-47044042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 150 | 
| Conread position: | 12-431 | 
| Cow position: | chr6:51745-52154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 12 | 
| Conread position: | 12-431 | 
| Cow position: | chr6:913401-912989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 249, 22 | 
| Conread position: | 12-432 | 
| Cow position: | chr6:65822354-65822773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 210 | 
| Conread position: | 13-325 | 
| Cow position: | chr6:2374478-2374164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 26, 80 | 
| Conread position: | 13-325 | 
| Cow position: | chr6:7141700-7142011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 26, 107 | 
| Conread position: | 13-431 | 
| Cow position: | chr6:65841366-65840946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 273 | 
| Conread position: | 13-483 | 
| Cow position: | chr6:44028819-44028326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 497 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 187, 21 | 
| Conread position: | 14-431 | 
| Cow position: | chr6:10558875-10559256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 25, 49 | 
| Conread position: | 14-459 | 
| Cow position: | chr6:30275412-30275844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 162 | 
| Conread position: | 15-464 | 
| Cow position: | chr6:2402020-2401588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 184, 95 | 
| Conread position: | 18-431 | 
| Cow position: | chr6:65007610-65007226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 183 | 
| Conread position: | 24-277 | 
| Cow position: | chr6:29311255-29311001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 198, 0 | 
| Conread position: | 24-480 | 
| Cow position: | chr6:66194218-66194667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 335, 32 | 
| Conread position: | 24-505 | 
| Cow position: | chr6:66231574-66231100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 91 | 
| Conread position: | 26-474 | 
| Cow position: | chr6:65900151-65900604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 175 | 
| Conread position: | 36-279 | 
| Cow position: | chr6:28106020-28106256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 36-395 | 
| Cow position: | chr6:52736149-52735789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 244, 99 | 
| Conread position: | 36-476 | 
| Cow position: | chr6:13846782-13846344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 326, 214 | 
| Conread position: | 42-325 | 
| Cow position: | chr6:21836358-21836658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 73, 104 | 
| Conread position: | 42-431 | 
| Cow position: | chr6:3889747-3890129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 317, 54 | 
| Conread position: | 73-431 | 
| Cow position: | chr6:2111246-2111595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 229, 174 | 
| Conread position: | 77-228 | 
| Cow position: | chr6:13276267-13276115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 77-443 | 
| Cow position: | chr6:13317980-13318337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 203, 112 | 
| Conread position: | 92-246 | 
| Cow position: | chr6:10640482-10640330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 142, 45 | 
| Conread position: | 106-431 | 
| Cow position: | chr6:40554932-40555252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 19, 33 | 
| Conread position: | 114-431 | 
| Cow position: | chr6:37477911-37477591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 155, 87 | 
| Conread position: | 140-431 | 
| Cow position: | chr6:62489067-62489359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 150, 78 | 
| Conread position: | 140-498 | 
| Cow position: | chr6:66538970-66538622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 220, 77 | 
| Conread position: | 144-473 | 
| Cow position: | chr6:476734-476408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 158, 136 | 
| Conread position: | 197-431 | 
| Cow position: | chr6:62829312-62829539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 162, 83 | 
| Conread position: | 219-431 | 
| Cow position: | chr6:8761889-8762093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 143, 23 | 
| Conread position: | 308-432 | 
| Cow position: | chr6:13943349-13943223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 308-479 | 
| Cow position: | chr6:332029-332205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 308-499 | 
| Cow position: | chr6:65927162-65926968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 54, 174 | 
Show alignments to all cow chromosomes.
