Cow genome map

Conread name: Ova1-OVRM10105C05

Conread position: 1-252
Cow position:
Alignm length: 260
Alignm identity: 194
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 13, 146

Conread position: 1-277
Cow position:
Alignm length: 283
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 17

Conread position: 1-370
Cow position:
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 17

Conread position: 1-431
Cow position:
Alignm length: 435
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 73

Conread position: 1-431
Cow position:
Alignm length: 435
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 208

Conread position: 1-432
Cow position:
Alignm length: 437
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 281

Conread position: 1-432
Cow position:
Alignm length: 436
Alignm identity: 283
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 13, 60

Conread position: 1-505
Cow position:
Alignm length: 515
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 39

Conread position: 2-161
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 27

Conread position: 2-198
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 177

Conread position: 2-212
Cow position:
Alignm length: 212
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 120

Conread position: 2-228
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 35, 165

Conread position: 2-229
Cow position:
Alignm length: 230
Alignm identity: 171
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 37, 114

Conread position: 2-237
Cow position:
Alignm length: 237
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 16

Conread position: 2-252
Cow position:
Alignm length: 253
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 122, 32

Conread position: 2-252
Cow position:
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 126, 0

Conread position: 2-253
Cow position:
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 18

Conread position: 2-275
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 2-278
Cow position:
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 212

Conread position: 2-325
Cow position:
Alignm length: 330
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 233

Conread position: 2-325
Cow position:
Alignm length: 331
Alignm identity: 226
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 149

Conread position: 2-325
Cow position:
Alignm length: 330
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 15

Conread position: 2-325
Cow position:
Alignm length: 331
Alignm identity: 227
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 133

Conread position: 2-325
Cow position:
Alignm length: 331
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 215

Conread position: 2-325
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 215

Conread position: 2-353
Cow position:
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 71

Conread position: 2-371
Cow position:
Alignm length: 373
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 19

Conread position: 2-424
Cow position:
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 278

Conread position: 2-426
Cow position:
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 240

Conread position: 2-431
Cow position:
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 79

Conread position: 2-431
Cow position:
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 280

Conread position: 2-431
Cow position:
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 282

Conread position: 2-431
Cow position:
Alignm length: 433
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 280

Conread position: 2-432
Cow position:
Alignm length: 435
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 126

Conread position: 2-432
Cow position:
Alignm length: 437
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 162

Conread position: 2-482
Cow position:
Alignm length: 514
Alignm identity: 348
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 123

Conread position: 2-484
Cow position:
Alignm length: 491
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 70

Conread position: 2-515
Cow position:
Alignm length: 528
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 126

Conread position: 3-222
Cow position:
Alignm length: 221
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 3-240
Cow position:
Alignm length: 241
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 160

Conread position: 3-243
Cow position:
Alignm length: 245
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 186

Conread position: 3-360
Cow position:
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 201

Conread position: 3-371
Cow position:
Alignm length: 379
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 40

Conread position: 3-382
Cow position:
Alignm length: 385
Alignm identity: 237
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 215

Conread position: 3-472
Cow position:
Alignm length: 481
Alignm identity: 316
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 36, 94

Conread position: 3-481
Cow position:
Alignm length: 486
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 159

Conread position: 3-485
Cow position:
Alignm length: 504
Alignm identity: 329
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 36, 52

Conread position: 4-325
Cow position:
Alignm length: 329
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 314

Conread position: 6-277
Cow position:
Alignm length: 272
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 0

Conread position: 7-396
Cow position:
Alignm length: 395
Alignm identity: 268
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 27, 7

Conread position: 11-230
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 23, 0

Conread position: 11-254
Cow position:
Alignm length: 245
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 8

Conread position: 11-402
Cow position:
Alignm length: 398
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 115

Conread position: 11-474
Cow position:
Alignm length: 473
Alignm identity: 314
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 27, 95

Conread position: 11-481
Cow position:
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 23

Conread position: 12-211
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 12-325
Cow position:
Alignm length: 318
Alignm identity: 218
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 27, 0

Conread position: 12-431
Cow position:
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 22

Conread position: 13-210
Cow position:
Alignm length: 199
Alignm identity: 149
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 13-431
Cow position:
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 11

Conread position: 13-464
Cow position:
Alignm length: 459
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 126

Conread position: 13-483
Cow position:
Alignm length: 485
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 11

Conread position: 14-431
Cow position:
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 268

Conread position: 15-319
Cow position:
Alignm length: 306
Alignm identity: 197
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 14

Conread position: 15-431
Cow position:
Alignm length: 425
Alignm identity: 277
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 44

Conread position: 17-430
Cow position:
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 222

Conread position: 17-468
Cow position:
Alignm length: 460
Alignm identity: 305
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 27, 18

Conread position: 18-278
Cow position:
Alignm length: 271
Alignm identity: 181
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 234

Conread position: 18-431
Cow position:
Alignm length: 418
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 21-225
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 85, 15

Conread position: 22-325
Cow position:
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 196

Conread position: 23-380
Cow position:
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 34

Conread position: 23-472
Cow position:
Alignm length: 463
Alignm identity: 301
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 92

Conread position: 23-484
Cow position:
Alignm length: 472
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 157

Conread position: 24-431
Cow position:
Alignm length: 412
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 257

Conread position: 24-432
Cow position:
Alignm length: 426
Alignm identity: 282
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 86

Conread position: 24-432
Cow position:
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 102

Conread position: 24-474
Cow position:
Alignm length: 459
Alignm identity: 306
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 8, 13

Conread position: 25-251
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 10, 0

Conread position: 26-278
Cow position:
Alignm length: 254
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 80

Conread position: 26-316
Cow position:
Alignm length: 296
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 0

Conread position: 27-431
Cow position:
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 222

Conread position: 29-475
Cow position:
Alignm length: 459
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 72

Conread position: 44-478
Cow position:
Alignm length: 443
Alignm identity: 279
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 232, 27

Conread position: 44-480
Cow position:
Alignm length: 441
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 70

Conread position: 64-515
Cow position:
Alignm length: 464
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 413

Conread position: 65-318
Cow position:
Alignm length: 259
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 65-325
Cow position:
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 123

Conread position: 65-480
Cow position:
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 32

Conread position: 65-480
Cow position:
Alignm length: 418
Alignm identity: 277
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 343, 36

Conread position: 72-483
Cow position:
Alignm length: 425
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 71

Conread position: 74-431
Cow position:
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 115

Conread position: 110-472
Cow position:
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 167

Conread position: 117-475
Cow position:
Alignm length: 366
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 283

Conread position: 143-431
Cow position:
Alignm length: 292
Alignm identity: 206
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 159, 137

Conread position: 151-431
Cow position:
Alignm length: 283
Alignm identity: 196
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 205, 129

Conread position: 154-431
Cow position:
Alignm length: 286
Alignm identity: 203
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 54, 127

Conread position: 155-483
Cow position:
Alignm length: 344
Alignm identity: 224
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 23

Conread position: 167-484
Cow position:
Alignm length: 328
Alignm identity: 218
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 157, 7

Conread position: 180-482
Cow position:
Alignm length: 313
Alignm identity: 214
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 103

Conread position: 203-431
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 79

Conread position: 207-483
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 72, 47

Conread position: 209-481
Cow position:
Alignm length: 282
Alignm identity: 188
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 105, 62

Conread position: 257-432
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 102, 22

Conread position: 279-431
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 282-493
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 286-484
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 175

Conread position: 291-433
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 317-483
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 327-481
Cow position:
Alignm length: 161
Alignm identity: 130
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.