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Cow genome map

           
Conread name:
           
Ova1-OVRM10105E07
        

               
Conread position:
               
167-415
               

               
Cow position:
               
chr18:39460428-39460188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
172-682
               

               
Cow position:
               
chr18:38985897-38985397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 41
               

               
Conread position:
               
175-589
               

               
Cow position:
               
chr18:7414823-7415230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
33, 120
               

               
Conread position:
               
184-565
               

               
Cow position:
               
chr18:55747890-55747506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 170
               

               
Conread position:
               
184-734
               

               
Cow position:
               
chr18:56181262-56181800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
187-550
               

               
Cow position:
               
chr18:19641166-19640817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
187, 17
               

               
Conread position:
               
189-535
               

               
Cow position:
               
chr18:728214-727889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
190-502
               

               
Cow position:
               
chr18:20309285-20308967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 173
               

               
Conread position:
               
191-379
               

               
Cow position:
               
chr18:4485786-4485604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
24, 6
               

               
Conread position:
               
192-635
               

               
Cow position:
               
chr18:32883480-32883058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
400, 57
               

               
Conread position:
               
194-296
               

               
Cow position:
               
chr18:40356758-40356860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
194-376
               

               
Cow position:
               
chr18:19230108-19229924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
194-439
               

               
Cow position:
               
chr18:10051933-10051692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
194-743
               

               
Cow position:
               
chr18:30359963-30360474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 10
               

               
Conread position:
               
195-743
               

               
Cow position:
               
chr18:28657732-28658262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
196-416
               

               
Cow position:
               
chr18:35786237-35786023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
196-430
               

               
Cow position:
               
chr18:6278287-6278520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
196-439
               

               
Cow position:
               
chr18:36229493-36229737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
160, 17
               

               
Conread position:
               
196-491
               

               
Cow position:
               
chr18:1931275-1931559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
196-527
               

               
Cow position:
               
chr18:42751404-42751752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
97, 159
               

               
Conread position:
               
196-688
               

               
Cow position:
               
chr18:18918779-18919249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 83
               

               
Conread position:
               
196-689
               

               
Cow position:
               
chr18:10905033-10904549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
196-707
               

               
Cow position:
               
chr18:54572106-54572612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 18
               

               
Conread position:
               
197-407
               

               
Cow position:
               
chr18:36734378-36734587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
197-429
               

               
Cow position:
               
chr18:42427800-42427574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
197-530
               

               
Cow position:
               
chr18:11907386-11907052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
197-552
               

               
Cow position:
               
chr18:50625198-50625536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
147, 22
               

               
Conread position:
               
198-536
               

               
Cow position:
               
chr18:1571056-1571386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
22, 85
               

               
Conread position:
               
199-446
               

               
Cow position:
               
chr18:50359507-50359267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
199-682
               

               
Cow position:
               
chr18:42479395-42479870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 103
               

               
Conread position:
               
199-739
               

               
Cow position:
               
chr18:9010887-9010383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
200-381
               

               
Cow position:
               
chr18:36500901-36501076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
200-409
               

               
Cow position:
               
chr18:4718440-4718233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
190, 39
               

               
Conread position:
               
200-499
               

               
Cow position:
               
chr18:23169759-23169463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
180, 18
               

               
Conread position:
               
200-737
               

               
Cow position:
               
chr18:16043969-16044498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
200-743
               

               
Cow position:
               
chr18:21195166-21195693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
201-364
               

               
Cow position:
               
chr18:16760702-16760538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
201-373
               

               
Cow position:
               
chr18:35950225-35950045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
201-374
               

               
Cow position:
               
chr18:27637671-27637501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
201-408
               

               
Cow position:
               
chr18:697040-697242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
201-414
               

               
Cow position:
               
chr18:18664185-18664404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
201-431
               

               
Cow position:
               
chr18:50632267-50632490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
201-439
               

               
Cow position:
               
chr18:46879981-46880225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 79
               

               
Conread position:
               
201-442
               

               
Cow position:
               
chr18:32600233-32599992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
201-442
               

               
Cow position:
               
chr18:52251675-52251917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
237, 0
               

               
Conread position:
               
201-443
               

               
Cow position:
               
chr18:52414144-52413904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
201-490
               

               
Cow position:
               
chr18:10065336-10065633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
201-501
               

               
Cow position:
               
chr18:2146413-2146700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
237, 76
               

               
Conread position:
               
201-507
               

               
Cow position:
               
chr18:50959668-50959365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
184, 128
               

               
Conread position:
               
201-628
               

               
Cow position:
               
chr18:4495710-4496124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
201-683
               

               
Cow position:
               
chr18:50382431-50381966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 105
               

               
Conread position:
               
202-364
               

               
Cow position:
               
chr18:4907322-4907166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
202-373
               

               
Cow position:
               
chr18:2144748-2144581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
202-380
               

               
Cow position:
               
chr18:21528827-21528650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
144, 12
               

               
Conread position:
               
202-382
               

               
Cow position:
               
chr18:31556978-31557159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
7, 178
               

               
Conread position:
               
202-412
               

               
Cow position:
               
chr18:38363657-38363444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
202-424
               

               
Cow position:
               
chr18:37187813-37188038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
202-436
               

               
Cow position:
               
chr18:18844191-18843961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
202-443
               

               
Cow position:
               
chr18:43796779-43797016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
202-523
               

               
Cow position:
               
chr18:42988127-42988449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
202-525
               

               
Cow position:
               
chr18:22055685-22056018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
202-559
               

               
Cow position:
               
chr18:12273831-12273481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
338, 20
               

               
Conread position:
               
202-568
               

               
Cow position:
               
chr18:52478334-52477970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
202-578
               

               
Cow position:
               
chr18:52472688-52472307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
202-610
               

               
Cow position:
               
chr18:16545281-16545684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 180
               

               
Conread position:
               
202-700
               

               
Cow position:
               
chr18:4884342-4884823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
202-743
               

               
Cow position:
               
chr18:9974153-9974678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 12
               

               
Conread position:
               
202-743
               

               
Cow position:
               
chr18:45104251-45104801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 183
               

               
Conread position:
               
202-743
               

               
Cow position:
               
chr18:51178535-51179099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 314
               

               
Conread position:
               
203-391
               

               
Cow position:
               
chr18:15351548-15351739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
204-336
               

               
Cow position:
               
chr18:32960256-32960124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
204-356
               

               
Cow position:
               
chr18:36296571-36296715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
204-363
               

               
Cow position:
               
chr18:200110-200271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
204-364
               

               
Cow position:
               
chr18:4857546-4857705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
204-364
               

               
Cow position:
               
chr18:29945711-29945551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
204-374
               

               
Cow position:
               
chr18:21751556-21751387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
204-374
               

               
Cow position:
               
chr18:36098534-36098375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
204-380
               

               
Cow position:
               
chr18:11233596-11233417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 10
               

               
Conread position:
               
204-380
               

               
Cow position:
               
chr18:14172037-14172208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
204-380
               

               
Cow position:
               
chr18:14871428-14871601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
204-382
               

               
Cow position:
               
chr18:22045235-22045412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
204-398
               

               
Cow position:
               
chr18:45186045-45185857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
204-399
               

               
Cow position:
               
chr18:49280887-49281077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
204-406
               

               
Cow position:
               
chr18:45897903-45897709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
204-410
               

               
Cow position:
               
chr18:49602866-49603070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
204-414
               

               
Cow position:
               
chr18:1858957-1859168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
170, 175
               

               
Conread position:
               
204-424
               

               
Cow position:
               
chr18:45573557-45573340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
204-429
               

               
Cow position:
               
chr18:6470268-6470049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
204-432
               

               
Cow position:
               
chr18:35827202-35827422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
204-440
               

               
Cow position:
               
chr18:32253330-32253566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
204-441
               

               
Cow position:
               
chr18:23941440-23941682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
30, 201
               

               
Conread position:
               
204-463
               

               
Cow position:
               
chr18:50567080-50566826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
204-494
               

               
Cow position:
               
chr18:47486224-47485945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
204-507
               

               
Cow position:
               
chr18:15517001-15517297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
204-511
               

               
Cow position:
               
chr18:35751202-35751501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
109, 41
               

               
Conread position:
               
204-536
               

               
Cow position:
               
chr18:5632441-5632116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
204-558
               

               
Cow position:
               
chr18:52684427-52684778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
231, 10
               

               
Conread position:
               
204-622
               

               
Cow position:
               
chr18:23714713-23715119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
227, 77
               

               
Conread position:
               
204-626
               

               
Cow position:
               
chr18:18961656-18962074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 119
               

               
Conread position:
               
204-673
               

               
Cow position:
               
chr18:4668332-4668775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
452, 10
               

               
Conread position:
               
204-683
               

               
Cow position:
               
chr18:46452706-46453170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
204-688
               

               
Cow position:
               
chr18:9558142-9557685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
347, 54
               

               
Conread position:
               
204-701
               

               
Cow position:
               
chr18:26354865-26355331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 158
               

               
Conread position:
               
204-741
               

               
Cow position:
               
chr18:40759397-40758864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 254
               

               
Conread position:
               
204-742
               

               
Cow position:
               
chr18:11779826-11779312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 25
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr18:3180586-3180066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
471, 93
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr18:12117677-12118199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 86
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr18:19849595-19850098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 81
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr18:22120708-22121234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr18:22789913-22790423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr18:23446883-23447432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 98
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr18:27079043-27078494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 171
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr18:28101805-28101272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 46
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr18:44262798-44262264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 10
               

               
Conread position:
               
205-344
               

               
Cow position:
               
chr18:22240007-22240138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
205-373
               

               
Cow position:
               
chr18:26262036-26262203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 149
               

               
Conread position:
               
205-380
               

               
Cow position:
               
chr18:8975567-8975399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
205-380
               

               
Cow position:
               
chr18:52387043-52387217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
205-408
               

               
Cow position:
               
chr18:32166-31970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
205-422
               

               
Cow position:
               
chr18:20998235-20998455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 175
               

               
Conread position:
               
205-424
               

               
Cow position:
               
chr18:14225563-14225353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
205-427
               

               
Cow position:
               
chr18:53092839-53093062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
205-430
               

               
Cow position:
               
chr18:15861411-15861188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
205-534
               

               
Cow position:
               
chr18:4264219-4264538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
205-619
               

               
Cow position:
               
chr18:17956202-17956612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
193, 172
               

               
Conread position:
               
205-625
               

               
Cow position:
               
chr18:33896239-33896656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 46
               

               
Conread position:
               
205-663
               

               
Cow position:
               
chr18:17649564-17650007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
233, 117
               

               
Conread position:
               
205-741
               

               
Cow position:
               
chr18:51691285-51691820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
205-743
               

               
Cow position:
               
chr18:10576278-10575758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 85
               

               
Conread position:
               
205-743
               

               
Cow position:
               
chr18:33300059-33299550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
397, 16
               

               
Conread position:
               
205-743
               

               
Cow position:
               
chr18:37023361-37023910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 267
               

               
Conread position:
               
205-743
               

               
Cow position:
               
chr18:55505577-55505050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 19
               

               
Conread position:
               
206-316
               

               
Cow position:
               
chr18:37160424-37160534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-362
               

               
Cow position:
               
chr18:22739985-22740141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-365
               

               
Cow position:
               
chr18:25757140-25757298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
206-368
               

               
Cow position:
               
chr18:46048238-46048076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-374
               

               
Cow position:
               
chr18:3709406-3709239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
206-381
               

               
Cow position:
               
chr18:14201066-14201241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-381
               

               
Cow position:
               
chr18:21260360-21260185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-381
               

               
Cow position:
               
chr18:47175204-47175379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 148
               

               
Conread position:
               
206-382
               

               
Cow position:
               
chr18:14874729-14874553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-382
               

               
Cow position:
               
chr18:56463554-56463729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
206-398
               

               
Cow position:
               
chr18:17195172-17195360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
206-408
               

               
Cow position:
               
chr18:11330397-11330194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
206-409
               

               
Cow position:
               
chr18:39689964-39689761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-419
               

               
Cow position:
               
chr18:14577200-14576992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
206-422
               

               
Cow position:
               
chr18:22328320-22328104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-422
               

               
Cow position:
               
chr18:52383081-52382865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-426
               

               
Cow position:
               
chr18:21969627-21969846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
103, 188
               

               
Conread position:
               
206-429
               

               
Cow position:
               
chr18:45899069-45898846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr18:7963952-7963733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
206-459
               

               
Cow position:
               
chr18:40280922-40281177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
156, 249
               

               
Conread position:
               
206-476
               

               
Cow position:
               
chr18:55583597-55583329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
99, 159
               

               
Conread position:
               
206-477
               

               
Cow position:
               
chr18:9756256-9755985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
206-477
               

               
Cow position:
               
chr18:16812329-16812060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
239, 0
               

               
Conread position:
               
206-477
               

               
Cow position:
               
chr18:19868084-19868354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
232, 181
               

               
Conread position:
               
206-487
               

               
Cow position:
               
chr18:53795658-53795381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
232, 183
               

               
Conread position:
               
206-498
               

               
Cow position:
               
chr18:5701438-5701137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 194
               

               
Conread position:
               
206-504
               

               
Cow position:
               
chr18:12584670-12584961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
222, 62
               

               
Conread position:
               
206-529
               

               
Cow position:
               
chr18:23623455-23623775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
206-536
               

               
Cow position:
               
chr18:6005327-6005644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
197, 43
               

               
Conread position:
               
206-543
               

               
Cow position:
               
chr18:19688202-19687864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 251
               

               
Conread position:
               
206-544
               

               
Cow position:
               
chr18:30225355-30225701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
220, 77
               

               
Conread position:
               
206-555
               

               
Cow position:
               
chr18:43951002-43950656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 107
               

               
Conread position:
               
206-566
               

               
Cow position:
               
chr18:28930466-28930808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 76
               

               
Conread position:
               
206-597
               

               
Cow position:
               
chr18:178863-179236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
326, 170
               

               
Conread position:
               
206-613
               

               
Cow position:
               
chr18:3212054-3211647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 89
               

               
Conread position:
               
206-657
               

               
Cow position:
               
chr18:35453103-35452677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
232, 240
               

               
Conread position:
               
206-663
               

               
Cow position:
               
chr18:4629219-4628761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 280
               

               
Conread position:
               
206-667
               

               
Cow position:
               
chr18:3044631-3044155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 182
               

               
Conread position:
               
206-684
               

               
Cow position:
               
chr18:31724703-31725176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
87, 60
               

               
Conread position:
               
206-701
               

               
Cow position:
               
chr18:43822779-43823262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 160
               

               
Conread position:
               
206-708
               

               
Cow position:
               
chr18:19143330-19143831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 193
               

               
Conread position:
               
206-710
               

               
Cow position:
               
chr18:6275983-6275495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 74
               

               
Conread position:
               
206-714
               

               
Cow position:
               
chr18:52637353-52637859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 120
               

               
Conread position:
               
206-734
               

               
Cow position:
               
chr18:4748713-4749226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 39
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr18:7487409-7486898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 156
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr18:7951289-7950759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr18:7956324-7955794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr18:7965406-7964877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 140
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr18:12775607-12776127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 256
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr18:20328620-20329163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 244
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr18:20865161-20864633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 121
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr18:55692992-55692468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 68
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr18:55701488-55701999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 18
               

               
Conread position:
               
207-372
               

               
Cow position:
               
chr18:50004533-50004694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
207-375
               

               
Cow position:
               
chr18:9642703-9642876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr18:23898586-23898420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
207-382
               

               
Cow position:
               
chr18:24946253-24946088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
207-400
               

               
Cow position:
               
chr18:16382034-16381841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
207-408
               

               
Cow position:
               
chr18:8208250-8208450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
102, 91
               

               
Conread position:
               
207-414
               

               
Cow position:
               
chr18:1181742-1181541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
207-415
               

               
Cow position:
               
chr18:36190826-36191036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
207-425
               

               
Cow position:
               
chr18:23649099-23648880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
207-430
               

               
Cow position:
               
chr18:48441960-48441741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
207-439
               

               
Cow position:
               
chr18:5600813-5600580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
207-489
               

               
Cow position:
               
chr18:8880329-8880055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
207-504
               

               
Cow position:
               
chr18:49267808-49268107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
36, 249
               

               
Conread position:
               
207-575
               

               
Cow position:
               
chr18:346321-346689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 193
               

               
Conread position:
               
207-590
               

               
Cow position:
               
chr18:39623977-39623596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 240
               

               
Conread position:
               
207-605
               

               
Cow position:
               
chr18:1954408-1954807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
207-656
               

               
Cow position:
               
chr18:10322969-10322536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 78
               

               
Conread position:
               
207-669
               

               
Cow position:
               
chr18:44137668-44137198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
207-687
               

               
Cow position:
               
chr18:39114945-39115439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 33
               

               
Conread position:
               
207-692
               

               
Cow position:
               
chr18:3115629-3115160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 209
               

               
Conread position:
               
207-732
               

               
Cow position:
               
chr18:9029786-9029274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 225
               

               
Conread position:
               
207-743
               

               
Cow position:
               
chr18:55553147-55552611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 243
               

               
Conread position:
               
208-379
               

               
Cow position:
               
chr18:34023398-34023226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr18:21401126-21401299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
208-401
               

               
Cow position:
               
chr18:39860604-39860789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
208-426
               

               
Cow position:
               
chr18:263318-263100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
208-439
               

               
Cow position:
               
chr18:44917927-44917701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
208-443
               

               
Cow position:
               
chr18:24719482-24719252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
208-443
               

               
Cow position:
               
chr18:44909224-44908992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
230, 92
               

               
Conread position:
               
208-477
               

               
Cow position:
               
chr18:36450075-36449805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 245
               

               
Conread position:
               
208-507
               

               
Cow position:
               
chr18:35534978-35535265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
257, 42
               

               
Conread position:
               
208-520
               

               
Cow position:
               
chr18:55549904-55549595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
208-559
               

               
Cow position:
               
chr18:51643197-51643541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 73
               

               
Conread position:
               
208-590
               

               
Cow position:
               
chr18:7109305-7108923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
208-737
               

               
Cow position:
               
chr18:20641329-20641828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 77
               

               
Conread position:
               
208-742
               

               
Cow position:
               
chr18:13172357-13172878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 128
               

               
Conread position:
               
208-743
               

               
Cow position:
               
chr18:3209891-3209367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
166, 90
               

               
Conread position:
               
209-343
               

               
Cow position:
               
chr18:20391377-20391241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
121, 92
               

               
Conread position:
               
209-363
               

               
Cow position:
               
chr18:37414796-37414949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
209-364
               

               
Cow position:
               
chr18:23809950-23810101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
209-364
               

               
Cow position:
               
chr18:34490452-34490300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
209-364
               

               
Cow position:
               
chr18:35171520-35171367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
209-366
               

               
Cow position:
               
chr18:38211330-38211173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr18:10668506-10668343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
209-382
               

               
Cow position:
               
chr18:4000523-4000347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
209-397
               

               
Cow position:
               
chr18:29188566-29188372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
209-408
               

               
Cow position:
               
chr18:49970480-49970678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
95, 38
               

               
Conread position:
               
209-429
               

               
Cow position:
               
chr18:45558314-45558101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
181, 71
               

               
Conread position:
               
209-539
               

               
Cow position:
               
chr18:51643843-51644175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
9, 245
               

               
Conread position:
               
209-550
               

               
Cow position:
               
chr18:25601155-25601480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
163, 5
               

               
Conread position:
               
209-551
               

               
Cow position:
               
chr18:55714496-55714834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 5
               

               
Conread position:
               
209-583
               

               
Cow position:
               
chr18:52703688-52704048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
9, 103
               

               
Conread position:
               
209-670
               

               
Cow position:
               
chr18:55759296-55759759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
65, 92
               

               
Conread position:
               
209-737
               

               
Cow position:
               
chr18:28793909-28794414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 49
               

               
Conread position:
               
209-743
               

               
Cow position:
               
chr18:5189521-5190033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 5
               

               
Conread position:
               
209-743
               

               
Cow position:
               
chr18:14586308-14586830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 70
               

               
Conread position:
               
209-743
               

               
Cow position:
               
chr18:29372041-29371513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 207
               

               
Conread position:
               
210-398
               

               
Cow position:
               
chr18:50612344-50612546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
210-408
               

               
Cow position:
               
chr18:35795050-35795247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
164, 106
               

               
Conread position:
               
211-362
               

               
Cow position:
               
chr18:35235852-35236002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
211-364
               

               
Cow position:
               
chr18:30676483-30676640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
80, 129
               

               
Conread position:
               
211-364
               

               
Cow position:
               
chr18:37690320-37690169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
211-371
               

               
Cow position:
               
chr18:34389212-34389371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
211-372
               

               
Cow position:
               
chr18:41703003-41702845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
211-380
               

               
Cow position:
               
chr18:237944-238113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
211-443
               

               
Cow position:
               
chr18:53053060-53053294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
211-476
               

               
Cow position:
               
chr18:21782854-21782603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
227, 35
               

               
Conread position:
               
211-501
               

               
Cow position:
               
chr18:49038623-49038345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
226, 36
               

               
Conread position:
               
211-563
               

               
Cow position:
               
chr18:50974119-50974471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
211-630
               

               
Cow position:
               
chr18:56155685-56155262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 129
               

               
Conread position:
               
211-743
               

               
Cow position:
               
chr18:29648949-29648435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 79
               

               
Conread position:
               
213-737
               

               
Cow position:
               
chr18:19193204-19193693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
214-362
               

               
Cow position:
               
chr18:33364376-33364233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 78
               

               
Conread position:
               
214-362
               

               
Cow position:
               
chr18:47824608-47824752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
214-372
               

               
Cow position:
               
chr18:4489735-4489897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
214-377
               

               
Cow position:
               
chr18:2576527-2576694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
214-380
               

               
Cow position:
               
chr18:3412530-3412364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
153, 157
               

               
Conread position:
               
214-380
               

               
Cow position:
               
chr18:44514256-44514089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
214-408
               

               
Cow position:
               
chr18:2108414-2108222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
214-408
               

               
Cow position:
               
chr18:31159106-31159298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
108, 43
               

               
Conread position:
               
214-414
               

               
Cow position:
               
chr18:9895831-9896025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
105, 121
               

               
Conread position:
               
214-419
               

               
Cow position:
               
chr18:48407898-48407703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
214-423
               

               
Cow position:
               
chr18:16659262-16659472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
214-430
               

               
Cow position:
               
chr18:18962596-18962378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
214-430
               

               
Cow position:
               
chr18:25107114-25106898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
152, 122
               

               
Conread position:
               
214-434
               

               
Cow position:
               
chr18:19765352-19765138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
214-441
               

               
Cow position:
               
chr18:51383232-51383454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
221, 76
               

               
Conread position:
               
214-443
               

               
Cow position:
               
chr18:22568902-22569127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
224, 47
               

               
Conread position:
               
214-443
               

               
Cow position:
               
chr18:38937986-38937761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
223, 81
               

               
Conread position:
               
214-443
               

               
Cow position:
               
chr18:45622636-45622865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
224, 48
               

               
Conread position:
               
214-498
               

               
Cow position:
               
chr18:42212610-42212333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
225, 28
               

               
Conread position:
               
214-511
               

               
Cow position:
               
chr18:23163060-23162768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
214-521
               

               
Cow position:
               
chr18:37303320-37303010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
160, 66
               

               
Conread position:
               
214-530
               

               
Cow position:
               
chr18:10214025-10214339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
149, 76
               

               
Conread position:
               
214-531
               

               
Cow position:
               
chr18:47392575-47392256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
224, 287
               

               
Conread position:
               
214-536
               

               
Cow position:
               
chr18:42292896-42293200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
224, 61
               

               
Conread position:
               
214-550
               

               
Cow position:
               
chr18:4555998-4556331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
73, 174
               

               
Conread position:
               
214-551
               

               
Cow position:
               
chr18:29474904-29474576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
176, 62
               

               
Conread position:
               
214-558
               

               
Cow position:
               
chr18:8170925-8171255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
214-566
               

               
Cow position:
               
chr18:43555347-43555703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 242
               

               
Conread position:
               
214-582
               

               
Cow position:
               
chr18:5072251-5072605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
224, 67
               

               
Conread position:
               
214-598
               

               
Cow position:
               
chr18:1399186-1399562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
224, 173
               

               
Conread position:
               
214-608
               

               
Cow position:
               
chr18:30341016-30341396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 81
               

               
Conread position:
               
214-631
               

               
Cow position:
               
chr18:247531-247923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
345, 83
               

               
Conread position:
               
214-634
               

               
Cow position:
               
chr18:17390824-17391216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 152
               

               
Conread position:
               
214-652
               

               
Cow position:
               
chr18:12023473-12023893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
214-655
               

               
Cow position:
               
chr18:48713708-48713292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
263, 67
               

               
Conread position:
               
214-665
               

               
Cow position:
               
chr18:12059160-12058744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
224, 67
               

               
Conread position:
               
214-671
               

               
Cow position:
               
chr18:11691240-11691689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 152
               

               
Conread position:
               
214-675
               

               
Cow position:
               
chr18:2591994-2592456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 180
               

               
Conread position:
               
214-681
               

               
Cow position:
               
chr18:20270845-20271309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 154
               

               
Conread position:
               
214-687
               

               
Cow position:
               
chr18:24974676-24975146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 167
               

               
Conread position:
               
214-688
               

               
Cow position:
               
chr18:1144026-1144489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 29
               

               
Conread position:
               
214-692
               

               
Cow position:
               
chr18:39875079-39875560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 146
               

               
Conread position:
               
214-703
               

               
Cow position:
               
chr18:56184112-56183626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
214-707
               

               
Cow position:
               
chr18:12113202-12113682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
217, 63
               

               
Conread position:
               
214-731
               

               
Cow position:
               
chr18:9089857-9089364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 45
               

               
Conread position:
               
214-735
               

               
Cow position:
               
chr18:51405751-51406238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 34
               

               
Conread position:
               
214-737
               

               
Cow position:
               
chr18:31672352-31672851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 84
               

               
Conread position:
               
214-737
               

               
Cow position:
               
chr18:47512161-47511646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
214-743
               

               
Cow position:
               
chr18:12242443-12241921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
214-743
               

               
Cow position:
               
chr18:12270678-12270138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 176
               

               
Conread position:
               
214-743
               

               
Cow position:
               
chr18:26939138-26938631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 36
               

               
Conread position:
               
214-743
               

               
Cow position:
               
chr18:43283590-43284105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
473, 55
               

               
Conread position:
               
214-743
               

               
Cow position:
               
chr18:45903730-45904245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
479, 76
               

               
Conread position:
               
215-398
               

               
Cow position:
               
chr18:19796752-19796938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
215-439
               

               
Cow position:
               
chr18:2773222-2773448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
86, 165
               

               
Conread position:
               
215-439
               

               
Cow position:
               
chr18:2776725-2776951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
86, 161
               

               
Conread position:
               
215-441
               

               
Cow position:
               
chr18:47547817-47548045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
215-442
               

               
Cow position:
               
chr18:5647973-5647753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
223, 76
               

               
Conread position:
               
215-442
               

               
Cow position:
               
chr18:52649174-52649407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
215-635
               

               
Cow position:
               
chr18:33008249-33007813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
215-687
               

               
Cow position:
               
chr18:55788829-55789287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
216-398
               

               
Cow position:
               
chr18:24022779-24022603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr18:49015280-49015023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
158, 52
               

               
Conread position:
               
216-734
               

               
Cow position:
               
chr18:37002801-37002287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
217-380
               

               
Cow position:
               
chr18:39710278-39710110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
217-382
               

               
Cow position:
               
chr18:49040443-49040615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
217-560
               

               
Cow position:
               
chr18:7134444-7134114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
132, 194
               

               
Conread position:
               
217-733
               

               
Cow position:
               
chr18:51757257-51756754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 73
               

               
Conread position:
               
217-743
               

               
Cow position:
               
chr18:20173974-20174484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 47
               

               
Conread position:
               
218-365
               

               
Cow position:
               
chr18:19961974-19962126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
218-382
               

               
Cow position:
               
chr18:35857762-35857923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
218-414
               

               
Cow position:
               
chr18:19809521-19809713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
218-443
               

               
Cow position:
               
chr18:31082181-31082409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
63, 110
               

               
Conread position:
               
218-536
               

               
Cow position:
               
chr18:24508071-24508389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
218-595
               

               
Cow position:
               
chr18:42431930-42432300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
217, 72
               

               
Conread position:
               
218-688
               

               
Cow position:
               
chr18:55499232-55498769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 68
               

               
Conread position:
               
218-693
               

               
Cow position:
               
chr18:33159105-33158653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
419, 80
               

               
Conread position:
               
218-704
               

               
Cow position:
               
chr18:46048916-46048454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 70
               

               
Conread position:
               
218-718
               

               
Cow position:
               
chr18:9366084-9365583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
218-737
               

               
Cow position:
               
chr18:9066862-9066369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
165, 63
               

               
Conread position:
               
218-742
               

               
Cow position:
               
chr18:11867500-11867000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 72
               

               
Conread position:
               
218-743
               

               
Cow position:
               
chr18:3158421-3158954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 160
               

               
Conread position:
               
218-743
               

               
Cow position:
               
chr18:6310242-6309740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 72
               

               
Conread position:
               
218-743
               

               
Cow position:
               
chr18:7952372-7951854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
69, 185
               

               
Conread position:
               
218-743
               

               
Cow position:
               
chr18:39662943-39662423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 115
               

               
Conread position:
               
219-374
               

               
Cow position:
               
chr18:49161139-49161294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 105
               

               
Conread position:
               
219-570
               

               
Cow position:
               
chr18:23821668-23822000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
349, 196
               

               
Conread position:
               
219-660
               

               
Cow position:
               
chr18:4757872-4758293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
220-364
               

               
Cow position:
               
chr18:28539950-28540093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr18:3097865-3098030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
220-558
               

               
Cow position:
               
chr18:30586076-30586390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
220-689
               

               
Cow position:
               
chr18:5766569-5766132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
220-743
               

               
Cow position:
               
chr18:42747759-42747233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 151
               

               
Conread position:
               
221-590
               

               
Cow position:
               
chr18:3193868-3193502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
86, 69
               

               
Conread position:
               
221-743
               

               
Cow position:
               
chr18:29065233-29065728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 59
               

               
Conread position:
               
223-381
               

               
Cow position:
               
chr18:4715454-4715606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
223-476
               

               
Cow position:
               
chr18:47417157-47416904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
215, 122
               

               
Conread position:
               
223-560
               

               
Cow position:
               
chr18:1392412-1392739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
249, 205
               

               
Conread position:
               
224-373
               

               
Cow position:
               
chr18:19143814-19143962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
224-536
               

               
Cow position:
               
chr18:42290178-42290472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
214, 51
               

               
Conread position:
               
225-374
               

               
Cow position:
               
chr18:41253698-41253549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
225-442
               

               
Cow position:
               
chr18:40047349-40047558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
201, 55
               

               
Conread position:
               
225-450
               

               
Cow position:
               
chr18:29495317-29495086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
225-550
               

               
Cow position:
               
chr18:24266248-24266575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 240
               

               
Conread position:
               
226-424
               

               
Cow position:
               
chr18:48112812-48113003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
226-430
               

               
Cow position:
               
chr18:19628848-19629052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
226-692
               

               
Cow position:
               
chr18:26999043-26998564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 98
               

               
Conread position:
               
229-743
               

               
Cow position:
               
chr18:39001663-39002149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
230-659
               

               
Cow position:
               
chr18:37381941-37382365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 91
               

               
Conread position:
               
230-683
               

               
Cow position:
               
chr18:15613714-15614135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
144, 51
               

               
Conread position:
               
231-429
               

               
Cow position:
               
chr18:54513267-54513070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 74
               

               
Conread position:
               
231-499
               

               
Cow position:
               
chr18:24759510-24759768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
197, 60
               

               
Conread position:
               
231-549
               

               
Cow position:
               
chr18:35874227-35873913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
232-587
               

               
Cow position:
               
chr18:30430913-30430569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
159, 183
               

               
Conread position:
               
232-688
               

               
Cow position:
               
chr18:42454871-42455316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 144
               

               
Conread position:
               
232-743
               

               
Cow position:
               
chr18:11184087-11183588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 57
               

               
Conread position:
               
233-743
               

               
Cow position:
               
chr18:29356486-29356991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 65
               

               
Conread position:
               
239-374
               

               
Cow position:
               
chr18:22703572-22703437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
239-535
               

               
Cow position:
               
chr18:30405517-30405811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
199, 72
               

               
Conread position:
               
243-596
               

               
Cow position:
               
chr18:3386977-3387331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
144, 11
               

               
Conread position:
               
244-510
               

               
Cow position:
               
chr18:34834633-34834367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
9, 135
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr18:47920884-47920755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-536
               

               
Cow position:
               
chr18:2774001-2774282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
193, 75
               

               
Conread position:
               
249-483
               

               
Cow position:
               
chr18:48962070-48961837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
114, 199
               

               
Conread position:
               
250-424
               

               
Cow position:
               
chr18:11754263-11754089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
250-593
               

               
Cow position:
               
chr18:48452195-48451847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
142, 31
               

               
Conread position:
               
251-579
               

               
Cow position:
               
chr18:858954-858618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
221, 47
               

               
Conread position:
               
252-717
               

               
Cow position:
               
chr18:29958045-29958474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
451, 37
               

               
Conread position:
               
264-696
               

               
Cow position:
               
chr18:4626007-4625596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 156
               

               
Conread position:
               
268-561
               

               
Cow position:
               
chr18:56190847-56191145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
268-704
               

               
Cow position:
               
chr18:48453785-48453383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
269-575
               

               
Cow position:
               
chr18:47835938-47835639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
121, 97
               

               
Conread position:
               
273-504
               

               
Cow position:
               
chr18:19883643-19883412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 180
               

               
Conread position:
               
273-583
               

               
Cow position:
               
chr18:27109183-27109492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
259, 22
               

               
Conread position:
               
273-609
               

               
Cow position:
               
chr18:39434930-39434606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
273-695
               

               
Cow position:
               
chr18:28923739-28924135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 36
               

               
Conread position:
               
280-536
               

               
Cow position:
               
chr18:16997357-16997103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
158, 166
               

               
Conread position:
               
280-582
               

               
Cow position:
               
chr18:19896348-19896650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
280-626
               

               
Cow position:
               
chr18:48828672-48829021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
72, 108
               

               
Conread position:
               
280-708
               

               
Cow position:
               
chr18:21102674-21103076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
252, 23
               

               
Conread position:
               
281-499
               

               
Cow position:
               
chr18:5078672-5078888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 43
               

               
Conread position:
               
281-619
               

               
Cow position:
               
chr18:51392541-51392873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
251, 106
               

               
Conread position:
               
281-659
               

               
Cow position:
               
chr18:21768715-21768360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
281-691
               

               
Cow position:
               
chr18:25647145-25647548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
281-743
               

               
Cow position:
               
chr18:28768469-28768013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
283-537
               

               
Cow position:
               
chr18:10898132-10897883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 84
               

               
Conread position:
               
283-537
               

               
Cow position:
               
chr18:46135840-46135591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
249, 14
               

               
Conread position:
               
283-743
               

               
Cow position:
               
chr18:52634971-52635435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 22
               

               
Conread position:
               
285-689
               

               
Cow position:
               
chr18:22214586-22214189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 221
               

               
Conread position:
               
287-742
               

               
Cow position:
               
chr18:7359841-7359384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 154
               

               
Conread position:
               
288-714
               

               
Cow position:
               
chr18:19273001-19273424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 217
               

               
Conread position:
               
290-689
               

               
Cow position:
               
chr18:25282462-25282852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 22
               

               
Conread position:
               
292-562
               

               
Cow position:
               
chr18:51850473-51850734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
240, 85
               

               
Conread position:
               
292-577
               

               
Cow position:
               
chr18:36746168-36746444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
146, 154
               

               
Conread position:
               
293-589
               

               
Cow position:
               
chr18:55806544-55806833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
293-691
               

               
Cow position:
               
chr18:33157905-33157522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 38
               

               
Conread position:
               
293-743
               

               
Cow position:
               
chr18:11322686-11322235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 157
               

               
Conread position:
               
293-743
               

               
Cow position:
               
chr18:17005351-17004900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 146
               

               
Conread position:
               
294-688
               

               
Cow position:
               
chr18:56159550-56159169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
298-687
               

               
Cow position:
               
chr18:6609766-6610153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 149
               

               
Conread position:
               
298-743
               

               
Cow position:
               
chr18:50082172-50082590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 140
               

               
Conread position:
               
299-588
               

               
Cow position:
               
chr18:2863906-2864199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
299-667
               

               
Cow position:
               
chr18:5711569-5711943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
111, 286
               

               
Conread position:
               
300-544
               

               
Cow position:
               
chr18:52855138-52854893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
90, 76
               

               
Conread position:
               
300-732
               

               
Cow position:
               
chr18:56171931-56172363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 76
               

               
Conread position:
               
300-742
               

               
Cow position:
               
chr18:36459014-36458581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
300-743
               

               
Cow position:
               
chr18:10656522-10656093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 136
               

               
Conread position:
               
301-743
               

               
Cow position:
               
chr18:11377446-11377017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 64
               

               
Conread position:
               
302-674
               

               
Cow position:
               
chr18:51655961-51656335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 143
               

               
Conread position:
               
303-743
               

               
Cow position:
               
chr18:35012237-35012660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
396, 135
               

               
Conread position:
               
305-676
               

               
Cow position:
               
chr18:47525486-47525122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 193
               

               
Conread position:
               
305-688
               

               
Cow position:
               
chr18:11685060-11684694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
133, 147
               

               
Conread position:
               
305-741
               

               
Cow position:
               
chr18:29796350-29796785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
316, 134
               

               
Conread position:
               
306-682
               

               
Cow position:
               
chr18:31586298-31586654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
307-588
               

               
Cow position:
               
chr18:18369286-18369563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
131, 17
               

               
Conread position:
               
307-729
               

               
Cow position:
               
chr18:44801813-44802223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
125, 141
               

               
Conread position:
               
311-536
               

               
Cow position:
               
chr18:381004-380783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
126, 105
               

               
Conread position:
               
311-626
               

               
Cow position:
               
chr18:43020332-43020624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
311-740
               

               
Cow position:
               
chr18:49100296-49100722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 126
               

               
Conread position:
               
311-743
               

               
Cow position:
               
chr18:33793762-33793350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
220, 40
               

               
Conread position:
               
311-743
               

               
Cow position:
               
chr18:47183221-47183639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 64
               

               
Conread position:
               
312-576
               

               
Cow position:
               
chr18:16686264-16686525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
62, 66
               

               
Conread position:
               
315-728
               

               
Cow position:
               
chr18:56166049-56165644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
113, 61
               

               
Conread position:
               
321-689
               

               
Cow position:
               
chr18:13360116-13359765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
330-691
               

               
Cow position:
               
chr18:51212236-51211883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 33
               

               
Conread position:
               
330-699
               

               
Cow position:
               
chr18:4381346-4380988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
330-743
               

               
Cow position:
               
chr18:13507687-13508080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 29
               

               
Conread position:
               
331-538
               

               
Cow position:
               
chr18:22274789-22274987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 34
               

               
Conread position:
               
333-557
               

               
Cow position:
               
chr18:4331011-4330785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
107, 151
               

               
Conread position:
               
348-608
               

               
Cow position:
               
chr18:47812504-47812249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
349-743
               

               
Cow position:
               
chr18:29862229-29862616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
350-743
               

               
Cow position:
               
chr18:15880811-15881208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 108
               

               
Conread position:
               
357-723
               

               
Cow position:
               
chr18:43065556-43065178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 98
               

               
Conread position:
               
367-742
               

               
Cow position:
               
chr18:6103081-6103456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
71, 90
               

               
Conread position:
               
394-741
               

               
Cow position:
               
chr18:10861440-10861768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
138, 56
               

               
Conread position:
               
394-743
               

               
Cow position:
               
chr18:33606620-33606276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 47
               

               
Conread position:
               
395-626
               

               
Cow position:
               
chr18:15340456-15340674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
400-693
               

               
Cow position:
               
chr18:11166964-11166676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 47
               

               
Conread position:
               
400-693
               

               
Cow position:
               
chr18:52658395-52658118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
402-654
               

               
Cow position:
               
chr18:35582116-35582364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
402-742
               

               
Cow position:
               
chr18:2774620-2774940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
301, 38
               

               
Conread position:
               
403-624
               

               
Cow position:
               
chr18:219320-219100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 186
               

               
Conread position:
               
403-639
               

               
Cow position:
               
chr18:21205344-21205119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
403-743
               

               
Cow position:
               
chr18:2608745-2609087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
403-743
               

               
Cow position:
               
chr18:35636366-35636701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
403-743
               

               
Cow position:
               
chr18:56150663-56151009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 138
               

               
Conread position:
               
405-691
               

               
Cow position:
               
chr18:11680702-11680421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
409-743
               

               
Cow position:
               
chr18:35076367-35076033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
410-605
               

               
Cow position:
               
chr18:53962665-53962470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
412-737
               

               
Cow position:
               
chr18:42966837-42966490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 38
               

               
Conread position:
               
421-723
               

               
Cow position:
               
chr18:52382666-52382367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
422-605
               

               
Cow position:
               
chr18:18868716-18868530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
434-743
               

               
Cow position:
               
chr18:24022327-24022037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
98, 18
               

               
Conread position:
               
437-615
               

               
Cow position:
               
chr18:29188962-29188786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 13
               

               
Conread position:
               
437-726
               

               
Cow position:
               
chr18:22092728-22092444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 125
               

               
Conread position:
               
441-578
               

               
Cow position:
               
chr18:18815727-18815867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
448-649
               

               
Cow position:
               
chr18:1582340-1582542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
449-682
               

               
Cow position:
               
chr18:16847631-16847408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
449-682
               

               
Cow position:
               
chr18:54658248-54658011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
449-743
               

               
Cow position:
               
chr18:52632471-52632772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
134, 29
               

               
Conread position:
               
450-742
               

               
Cow position:
               
chr18:36098140-36097864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
450-743
               

               
Cow position:
               
chr18:4316247-4315945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 24
               

               
Conread position:
               
451-631
               

               
Cow position:
               
chr18:28823031-28823208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
451-636
               

               
Cow position:
               
chr18:12809793-12809615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
451-673
               

               
Cow position:
               
chr18:46436828-46437034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
205, 51
               

               
Conread position:
               
451-683
               

               
Cow position:
               
chr18:267881-268102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
451-689
               

               
Cow position:
               
chr18:23807937-23808170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
451-743
               

               
Cow position:
               
chr18:16045066-16045354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
252, 87
               

               
Conread position:
               
451-743
               

               
Cow position:
               
chr18:41271024-41270733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
452-609
               

               
Cow position:
               
chr18:14085392-14085241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
452-702
               

               
Cow position:
               
chr18:36445374-36445122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 99
               

               
Conread position:
               
452-709
               

               
Cow position:
               
chr18:48290507-48290754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 52
               

               
Conread position:
               
452-732
               

               
Cow position:
               
chr18:19159037-19159307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 59
               

               
Conread position:
               
452-743
               

               
Cow position:
               
chr18:3098383-3098666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
80, 114
               

               
Conread position:
               
452-743
               

               
Cow position:
               
chr18:16417768-16418047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
455-693
               

               
Cow position:
               
chr18:35827478-35827716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 83
               

               
Conread position:
               
455-741
               

               
Cow position:
               
chr18:26286842-26286561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 83
               

               
Conread position:
               
455-741
               

               
Cow position:
               
chr18:32121130-32121413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
75, 113
               

               
Conread position:
               
455-742
               

               
Cow position:
               
chr18:35058271-35057991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
455-743
               

               
Cow position:
               
chr18:18627390-18627681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 0
               

               
Conread position:
               
455-743
               

               
Cow position:
               
chr18:24342549-24342272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 23
               

               
Conread position:
               
456-627
               

               
Cow position:
               
chr18:25984639-25984808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
460-737
               

               
Cow position:
               
chr18:9818765-9818492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 122
               

               
Conread position:
               
462-716
               

               
Cow position:
               
chr18:33756801-33756559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 101
               

               
Conread position:
               
462-719
               

               
Cow position:
               
chr18:11233358-11233101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 139
               

               
Conread position:
               
464-612
               

               
Cow position:
               
chr18:54056482-54056338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
65, 75
               

               
Conread position:
               
464-743
               

               
Cow position:
               
chr18:44236128-44235844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
465-743
               

               
Cow position:
               
chr18:28968015-28968296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
166, 175
               

               
Conread position:
               
467-626
               

               
Cow position:
               
chr18:28295786-28295945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
467-673
               

               
Cow position:
               
chr18:5539485-5539279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
161, 173
               

               
Conread position:
               
467-698
               

               
Cow position:
               
chr18:14127047-14127274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
164, 122
               

               
Conread position:
               
467-741
               

               
Cow position:
               
chr18:37510214-37509935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr18:19362365-19362632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
71, 116
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr18:22237037-22237309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
230, 113
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr18:23803283-23803004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 173
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr18:25355787-25355508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
232, 0
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr18:26306540-26306262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
232, 189
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr18:35638079-35637806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
164, 112
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr18:36512901-36512621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 174
               

               
Conread position:
               
468-740
               

               
Cow position:
               
chr18:2099430-2099702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
468-740
               

               
Cow position:
               
chr18:4624512-4624780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
470-743
               

               
Cow position:
               
chr18:27388470-27388200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
66, 94
               

               
Conread position:
               
471-636
               

               
Cow position:
               
chr18:35908539-35908379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
487-743
               

               
Cow position:
               
chr18:21721377-21721634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
487-743
               

               
Cow position:
               
chr18:27530268-27530010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
188, 113
               

               
Conread position:
               
487-743
               

               
Cow position:
               
chr18:49665258-49665511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
175, 44
               

               
Conread position:
               
496-737
               

               
Cow position:
               
chr18:1733302-1733531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
497-743
               

               
Cow position:
               
chr18:45395896-45395639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
506-742
               

               
Cow position:
               
chr18:35295447-35295209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
179, 69
               

               
Conread position:
               
509-651
               

               
Cow position:
               
chr18:24735000-24734858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
512-660
               

               
Cow position:
               
chr18:52402641-52402786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
514-743
               

               
Cow position:
               
chr18:33272816-33272592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
204, 59
               

               
Conread position:
               
517-703
               

               
Cow position:
               
chr18:2438852-2439031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
520-743
               

               
Cow position:
               
chr18:29264586-29264805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
79, 59
               
Show alignments to all cow chromosomes.