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Cow genome map

           
Conread name:
           
Ova1-OVRM10105E07
        

               
Conread position:
               
150-733
               

               
Cow position:
               
chr22:13957384-13957963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
151-442
               

               
Cow position:
               
chr22:33948718-33949001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
152-681
               

               
Cow position:
               
chr22:3325843-3325321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 61
               

               
Conread position:
               
156-743
               

               
Cow position:
               
chr22:36539405-36540000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 138
               

               
Conread position:
               
168-351
               

               
Cow position:
               
chr22:27084153-27084339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
170-693
               

               
Cow position:
               
chr22:14690722-14691249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
172-505
               

               
Cow position:
               
chr22:7140889-7140553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
17, 294
               

               
Conread position:
               
173-367
               

               
Cow position:
               
chr22:4083820-4084014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
173-408
               

               
Cow position:
               
chr22:1991841-1991604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 139
               

               
Conread position:
               
177-374
               

               
Cow position:
               
chr22:8287409-8287222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
180-382
               

               
Cow position:
               
chr22:43730516-43730316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
182-505
               

               
Cow position:
               
chr22:2408895-2409209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
184-727
               

               
Cow position:
               
chr22:17089517-17088971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
185-536
               

               
Cow position:
               
chr22:43237181-43237527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 114
               

               
Conread position:
               
185-742
               

               
Cow position:
               
chr22:3842844-3842303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
185-743
               

               
Cow position:
               
chr22:2470012-2470572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 159
               

               
Conread position:
               
187-380
               

               
Cow position:
               
chr22:35627574-35627381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
32, 140
               

               
Conread position:
               
187-553
               

               
Cow position:
               
chr22:31599659-31599314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
187-683
               

               
Cow position:
               
chr22:14178612-14179093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 13
               

               
Conread position:
               
187-743
               

               
Cow position:
               
chr22:39507814-39508356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
189-380
               

               
Cow position:
               
chr22:37702199-37702012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
189-382
               

               
Cow position:
               
chr22:13930497-13930311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
189-430
               

               
Cow position:
               
chr22:31209810-31209570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
189-545
               

               
Cow position:
               
chr22:617341-616993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
189-552
               

               
Cow position:
               
chr22:4560590-4560950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
119, 8
               

               
Conread position:
               
189-689
               

               
Cow position:
               
chr22:29642333-29641841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 177
               

               
Conread position:
               
189-709
               

               
Cow position:
               
chr22:38930281-38930805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
189-743
               

               
Cow position:
               
chr22:21415833-21415308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 25
               

               
Conread position:
               
189-743
               

               
Cow position:
               
chr22:22023127-22022565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 236
               

               
Conread position:
               
190-382
               

               
Cow position:
               
chr22:1074486-1074295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
190-430
               

               
Cow position:
               
chr22:1065326-1065088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
191-441
               

               
Cow position:
               
chr22:18966943-18967187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
237, 27
               

               
Conread position:
               
192-743
               

               
Cow position:
               
chr22:8412751-8412199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 109
               

               
Conread position:
               
193-737
               

               
Cow position:
               
chr22:23804768-23805300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 56
               

               
Conread position:
               
194-408
               

               
Cow position:
               
chr22:14600116-14600328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 129
               

               
Conread position:
               
194-439
               

               
Cow position:
               
chr22:4164193-4163953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
194-501
               

               
Cow position:
               
chr22:13092977-13093280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
302, 58
               

               
Conread position:
               
194-566
               

               
Cow position:
               
chr22:41496193-41495827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
121, 19
               

               
Conread position:
               
195-395
               

               
Cow position:
               
chr22:6203166-6202966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
179, 184
               

               
Conread position:
               
195-498
               

               
Cow position:
               
chr22:42745551-42745237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
110, 7
               

               
Conread position:
               
196-542
               

               
Cow position:
               
chr22:19891170-19890834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
196-706
               

               
Cow position:
               
chr22:25221689-25222184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 85
               

               
Conread position:
               
196-741
               

               
Cow position:
               
chr22:28071771-28071234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
371, 8
               

               
Conread position:
               
196-743
               

               
Cow position:
               
chr22:13735065-13735584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
197-544
               

               
Cow position:
               
chr22:19459831-19460166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
261, 119
               

               
Conread position:
               
197-658
               

               
Cow position:
               
chr22:44410931-44410485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
197-701
               

               
Cow position:
               
chr22:644568-645040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 53
               

               
Conread position:
               
197-743
               

               
Cow position:
               
chr22:12681582-12682120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
198-560
               

               
Cow position:
               
chr22:1035607-1035961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
198-578
               

               
Cow position:
               
chr22:33399275-33399642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 107
               

               
Conread position:
               
198-737
               

               
Cow position:
               
chr22:41982514-41983023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 14
               

               
Conread position:
               
198-743
               

               
Cow position:
               
chr22:23979994-23980544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 103
               

               
Conread position:
               
199-603
               

               
Cow position:
               
chr22:4156869-4157262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
104, 79
               

               
Conread position:
               
200-309
               

               
Cow position:
               
chr22:28732461-28732352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
200-327
               

               
Cow position:
               
chr22:35665661-35665789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
200-430
               

               
Cow position:
               
chr22:28569010-28568781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
200-436
               

               
Cow position:
               
chr22:26112579-26112343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
200-743
               

               
Cow position:
               
chr22:22860700-22861236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
201-373
               

               
Cow position:
               
chr22:6800199-6800366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
201-397
               

               
Cow position:
               
chr22:9735477-9735285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
201-408
               

               
Cow position:
               
chr22:35578567-35578772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
189, 119
               

               
Conread position:
               
201-425
               

               
Cow position:
               
chr22:4736235-4736012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
215, 0
               

               
Conread position:
               
201-504
               

               
Cow position:
               
chr22:18933503-18933808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
144, 23
               

               
Conread position:
               
201-521
               

               
Cow position:
               
chr22:33098188-33098515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
215, 18
               

               
Conread position:
               
201-590
               

               
Cow position:
               
chr22:32698974-32698587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 184
               

               
Conread position:
               
201-609
               

               
Cow position:
               
chr22:1563029-1563442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 187
               

               
Conread position:
               
201-611
               

               
Cow position:
               
chr22:16291724-16292111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 80
               

               
Conread position:
               
201-743
               

               
Cow position:
               
chr22:10162176-10161641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 62
               

               
Conread position:
               
201-743
               

               
Cow position:
               
chr22:11131078-11130551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
469, 89
               

               
Conread position:
               
201-743
               

               
Cow position:
               
chr22:15950656-15951203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 142
               

               
Conread position:
               
201-743
               

               
Cow position:
               
chr22:18259427-18258903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
202-359
               

               
Cow position:
               
chr22:26775712-26775554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
202-370
               

               
Cow position:
               
chr22:6649894-6650064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
202-373
               

               
Cow position:
               
chr22:19306110-19305938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
202-382
               

               
Cow position:
               
chr22:25312725-25312540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
202-410
               

               
Cow position:
               
chr22:26189081-26188873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
13, 97
               

               
Conread position:
               
202-430
               

               
Cow position:
               
chr22:16583655-16583429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
202-441
               

               
Cow position:
               
chr22:35215761-35215519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
202-443
               

               
Cow position:
               
chr22:7496898-7497141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
202-443
               

               
Cow position:
               
chr22:23372650-23372895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 117
               

               
Conread position:
               
202-492
               

               
Cow position:
               
chr22:1588505-1588217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
202-509
               

               
Cow position:
               
chr22:30607069-30606771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
10, 184
               

               
Conread position:
               
202-535
               

               
Cow position:
               
chr22:22013957-22013632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
183, 84
               

               
Conread position:
               
202-541
               

               
Cow position:
               
chr22:27828586-27828259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
5, 93
               

               
Conread position:
               
202-611
               

               
Cow position:
               
chr22:12803184-12803575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
256, 13
               

               
Conread position:
               
202-683
               

               
Cow position:
               
chr22:5595598-5596051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 176
               

               
Conread position:
               
202-688
               

               
Cow position:
               
chr22:4583771-4583303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 94
               

               
Conread position:
               
202-692
               

               
Cow position:
               
chr22:10983572-10983076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
202-704
               

               
Cow position:
               
chr22:9127606-9127124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 53
               

               
Conread position:
               
202-737
               

               
Cow position:
               
chr22:18025346-18025876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 190
               

               
Conread position:
               
202-737
               

               
Cow position:
               
chr22:34475778-34476319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 262
               

               
Conread position:
               
202-743
               

               
Cow position:
               
chr22:10338896-10339449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 193
               

               
Conread position:
               
202-743
               

               
Cow position:
               
chr22:17152897-17152354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
202-743
               

               
Cow position:
               
chr22:32661724-32661192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 155
               

               
Conread position:
               
202-743
               

               
Cow position:
               
chr22:43398208-43397694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
203-362
               

               
Cow position:
               
chr22:12981518-12981674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
203-436
               

               
Cow position:
               
chr22:42230314-42230544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
203-497
               

               
Cow position:
               
chr22:16541442-16541733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
169, 175
               

               
Conread position:
               
203-736
               

               
Cow position:
               
chr22:45132443-45132961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
198, 58
               

               
Conread position:
               
203-743
               

               
Cow position:
               
chr22:20627040-20626517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 78
               

               
Conread position:
               
204-318
               

               
Cow position:
               
chr22:11211487-11211601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
204-357
               

               
Cow position:
               
chr22:3960094-3960246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 121
               

               
Conread position:
               
204-359
               

               
Cow position:
               
chr22:9983619-9983774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
204-370
               

               
Cow position:
               
chr22:18403453-18403288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
204-372
               

               
Cow position:
               
chr22:33031015-33030839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr22:1973612-1973781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 116
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr22:9075617-9075447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr22:12853894-12854065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 121
               

               
Conread position:
               
204-374
               

               
Cow position:
               
chr22:11790192-11790022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
204-375
               

               
Cow position:
               
chr22:8767522-8767354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
204-379
               

               
Cow position:
               
chr22:13726912-13727079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
204-381
               

               
Cow position:
               
chr22:36762245-36762070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
204-398
               

               
Cow position:
               
chr22:27401939-27401752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
204-424
               

               
Cow position:
               
chr22:1821383-1821596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
166, 43
               

               
Conread position:
               
204-425
               

               
Cow position:
               
chr22:19413828-19414048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
204-442
               

               
Cow position:
               
chr22:1776269-1776030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
138, 175
               

               
Conread position:
               
204-442
               

               
Cow position:
               
chr22:2100743-2100976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
170, 85
               

               
Conread position:
               
204-443
               

               
Cow position:
               
chr22:6176076-6176316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
76, 175
               

               
Conread position:
               
204-443
               

               
Cow position:
               
chr22:26417486-26417252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
235, 83
               

               
Conread position:
               
204-462
               

               
Cow position:
               
chr22:12188268-12188527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
105, 216
               

               
Conread position:
               
204-462
               

               
Cow position:
               
chr22:12195354-12195614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
100, 217
               

               
Conread position:
               
204-474
               

               
Cow position:
               
chr22:3282626-3282883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
204-515
               

               
Cow position:
               
chr22:25809075-25809369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
204-527
               

               
Cow position:
               
chr22:37947928-37947612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
204-537
               

               
Cow position:
               
chr22:13222333-13221990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
204-554
               

               
Cow position:
               
chr22:27681931-27681578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 247
               

               
Conread position:
               
204-578
               

               
Cow position:
               
chr22:10416432-10416054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
164, 54
               

               
Conread position:
               
204-583
               

               
Cow position:
               
chr22:30818415-30818045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
204-590
               

               
Cow position:
               
chr22:6096811-6097196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 10
               

               
Conread position:
               
204-598
               

               
Cow position:
               
chr22:4162377-4162766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
162, 93
               

               
Conread position:
               
204-598
               

               
Cow position:
               
chr22:11601241-11600857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
204-636
               

               
Cow position:
               
chr22:47556067-47555629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 193
               

               
Conread position:
               
204-676
               

               
Cow position:
               
chr22:24732356-24732800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
204-683
               

               
Cow position:
               
chr22:5016695-5016254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
204-683
               

               
Cow position:
               
chr22:22613308-22612849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
457, 78
               

               
Conread position:
               
204-684
               

               
Cow position:
               
chr22:24066038-24066498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 31
               

               
Conread position:
               
204-728
               

               
Cow position:
               
chr22:14142919-14143416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 14
               

               
Conread position:
               
204-728
               

               
Cow position:
               
chr22:40387357-40386854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 84
               

               
Conread position:
               
204-734
               

               
Cow position:
               
chr22:4075679-4076214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 99
               

               
Conread position:
               
204-737
               

               
Cow position:
               
chr22:10295234-10294733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 77
               

               
Conread position:
               
204-737
               

               
Cow position:
               
chr22:12573411-12572880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 80
               

               
Conread position:
               
204-737
               

               
Cow position:
               
chr22:16533279-16532747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
204-740
               

               
Cow position:
               
chr22:1289324-1289829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
204-740
               

               
Cow position:
               
chr22:18926563-18926032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
204-741
               

               
Cow position:
               
chr22:13687908-13688435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 45
               

               
Conread position:
               
204-741
               

               
Cow position:
               
chr22:33447872-33448409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 213
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr22:1309532-1310052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
496, 38
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr22:1651695-1651194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
170, 91
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr22:6622047-6622570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 10
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr22:6720875-6721389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 99
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr22:10567513-10568009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr22:18838457-18837932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr22:33485420-33485929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 10
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr22:34895162-34894649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 36
               

               
Conread position:
               
204-743
               

               
Cow position:
               
chr22:40120665-40121187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 148
               

               
Conread position:
               
205-351
               

               
Cow position:
               
chr22:3061156-3061011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
205-362
               

               
Cow position:
               
chr22:10966341-10966186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
205-366
               

               
Cow position:
               
chr22:30293895-30293736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
205-373
               

               
Cow position:
               
chr22:7414842-7415014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 166
               

               
Conread position:
               
205-382
               

               
Cow position:
               
chr22:1728438-1728262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
205-382
               

               
Cow position:
               
chr22:43130936-43131113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
205-387
               

               
Cow position:
               
chr22:12637806-12637626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
205-392
               

               
Cow position:
               
chr22:24890425-24890242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
130, 86
               

               
Conread position:
               
205-408
               

               
Cow position:
               
chr22:12777179-12777372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
205-414
               

               
Cow position:
               
chr22:35403916-35403707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
205-417
               

               
Cow position:
               
chr22:2704504-2704294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
205-425
               

               
Cow position:
               
chr22:24802483-24802712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
205-426
               

               
Cow position:
               
chr22:23265444-23265665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
205-434
               

               
Cow position:
               
chr22:1984062-1983827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 179
               

               
Conread position:
               
205-443
               

               
Cow position:
               
chr22:4156611-4156848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
233, 94
               

               
Conread position:
               
205-443
               

               
Cow position:
               
chr22:8357782-8357553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
190, 9
               

               
Conread position:
               
205-485
               

               
Cow position:
               
chr22:15737437-15737163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
205-560
               

               
Cow position:
               
chr22:11766843-11767193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 85
               

               
Conread position:
               
205-617
               

               
Cow position:
               
chr22:12316013-12315615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
205-678
               

               
Cow position:
               
chr22:20331783-20332236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
176, 13
               

               
Conread position:
               
205-682
               

               
Cow position:
               
chr22:14372371-14371906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 13
               

               
Conread position:
               
205-683
               

               
Cow position:
               
chr22:17852433-17852884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 85
               

               
Conread position:
               
205-691
               

               
Cow position:
               
chr22:15567817-15568289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 85
               

               
Conread position:
               
205-693
               

               
Cow position:
               
chr22:46610572-46611053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 134
               

               
Conread position:
               
205-704
               

               
Cow position:
               
chr22:2623300-2623796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
205-708
               

               
Cow position:
               
chr22:40048762-40048275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 9
               

               
Conread position:
               
205-728
               

               
Cow position:
               
chr22:8138050-8138559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 257
               

               
Conread position:
               
205-743
               

               
Cow position:
               
chr22:6610153-6610674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 110
               

               
Conread position:
               
205-743
               

               
Cow position:
               
chr22:8733141-8733644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 86
               

               
Conread position:
               
205-743
               

               
Cow position:
               
chr22:18196715-18196183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 34
               

               
Conread position:
               
205-743
               

               
Cow position:
               
chr22:19341401-19340875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
205-743
               

               
Cow position:
               
chr22:40374811-40374281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 80
               

               
Conread position:
               
206-354
               

               
Cow position:
               
chr22:30074568-30074715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 40
               

               
Conread position:
               
206-355
               

               
Cow position:
               
chr22:27765410-27765261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-371
               

               
Cow position:
               
chr22:16274948-16275110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
206-373
               

               
Cow position:
               
chr22:1045984-1046152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
206-373
               

               
Cow position:
               
chr22:38947195-38947362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-374
               

               
Cow position:
               
chr22:6686517-6686683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
206-374
               

               
Cow position:
               
chr22:11497701-11497533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
206-380
               

               
Cow position:
               
chr22:45579207-45579034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
206-380
               

               
Cow position:
               
chr22:47820642-47820471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
206-381
               

               
Cow position:
               
chr22:3430399-3430224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
91, 126
               

               
Conread position:
               
206-382
               

               
Cow position:
               
chr22:6486169-6485993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
206-382
               

               
Cow position:
               
chr22:11039663-11039486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
206-382
               

               
Cow position:
               
chr22:30176924-30176748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-391
               

               
Cow position:
               
chr22:45706384-45706198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
206-407
               

               
Cow position:
               
chr22:29950085-29949883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
206-412
               

               
Cow position:
               
chr22:29881067-29881271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
206-414
               

               
Cow position:
               
chr22:16872661-16872868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
206-424
               

               
Cow position:
               
chr22:23601284-23601500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
206-430
               

               
Cow position:
               
chr22:2633052-2632825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
181, 66
               

               
Conread position:
               
206-431
               

               
Cow position:
               
chr22:39446499-39446274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 182
               

               
Conread position:
               
206-435
               

               
Cow position:
               
chr22:14187525-14187298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
217, 0
               

               
Conread position:
               
206-439
               

               
Cow position:
               
chr22:24055593-24055360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-443
               

               
Cow position:
               
chr22:16235297-16235536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
206-475
               

               
Cow position:
               
chr22:47525947-47525690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
206-476
               

               
Cow position:
               
chr22:2075799-2076069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
86, 182
               

               
Conread position:
               
206-476
               

               
Cow position:
               
chr22:18099823-18099557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
232, 159
               

               
Conread position:
               
206-498
               

               
Cow position:
               
chr22:36579179-36579466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
232, 180
               

               
Conread position:
               
206-503
               

               
Cow position:
               
chr22:4208789-4209081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
107, 150
               

               
Conread position:
               
206-509
               

               
Cow position:
               
chr22:43977358-43977656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
105, 76
               

               
Conread position:
               
206-516
               

               
Cow position:
               
chr22:8800242-8800556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
206-522
               

               
Cow position:
               
chr22:39602490-39602176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 246
               

               
Conread position:
               
206-530
               

               
Cow position:
               
chr22:1106274-1105949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
232, 258
               

               
Conread position:
               
206-530
               

               
Cow position:
               
chr22:15914842-15915156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 121
               

               
Conread position:
               
206-536
               

               
Cow position:
               
chr22:5837465-5837148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
232, 126
               

               
Conread position:
               
206-536
               

               
Cow position:
               
chr22:27619940-27619609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
113, 18
               

               
Conread position:
               
206-541
               

               
Cow position:
               
chr22:27275669-27275341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
206-546
               

               
Cow position:
               
chr22:39215408-39215743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 242
               

               
Conread position:
               
206-549
               

               
Cow position:
               
chr22:2123494-2123162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
206-576
               

               
Cow position:
               
chr22:15618811-15618455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
326, 230
               

               
Conread position:
               
206-583
               

               
Cow position:
               
chr22:15154206-15153831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 107
               

               
Conread position:
               
206-584
               

               
Cow position:
               
chr22:9668783-9668398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 0
               

               
Conread position:
               
206-657
               

               
Cow position:
               
chr22:4108524-4108975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 116
               

               
Conread position:
               
206-680
               

               
Cow position:
               
chr22:7967900-7967439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 44
               

               
Conread position:
               
206-683
               

               
Cow position:
               
chr22:11696991-11697471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 42
               

               
Conread position:
               
206-687
               

               
Cow position:
               
chr22:2010996-2010532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 66
               

               
Conread position:
               
206-689
               

               
Cow position:
               
chr22:15490859-15490391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 92
               

               
Conread position:
               
206-693
               

               
Cow position:
               
chr22:9372730-9372248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 237
               

               
Conread position:
               
206-697
               

               
Cow position:
               
chr22:31196289-31196772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 250
               

               
Conread position:
               
206-737
               

               
Cow position:
               
chr22:8302639-8303160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 102
               

               
Conread position:
               
206-737
               

               
Cow position:
               
chr22:23831134-23830613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
206-737
               

               
Cow position:
               
chr22:38939748-38940267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 83
               

               
Conread position:
               
206-740
               

               
Cow position:
               
chr22:23806334-23806869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 170
               

               
Conread position:
               
206-741
               

               
Cow position:
               
chr22:8883214-8882696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 94
               

               
Conread position:
               
206-742
               

               
Cow position:
               
chr22:6754060-6754575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 8
               

               
Conread position:
               
206-742
               

               
Cow position:
               
chr22:39472157-39472700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 261
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr22:1326622-1326096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 42
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr22:2095760-2095224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 173
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr22:14091017-14091553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 99
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr22:15959570-15960100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 169
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr22:16273845-16273309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 44
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr22:26134017-26134557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 106
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr22:32651718-32651184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 188
               

               
Conread position:
               
206-743
               

               
Cow position:
               
chr22:40349545-40349021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
462, 91
               

               
Conread position:
               
207-365
               

               
Cow position:
               
chr22:31409443-31409285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
207-372
               

               
Cow position:
               
chr22:13058581-13058747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr22:4632483-4632299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 125
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr22:16564349-16564180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr22:35902218-35902390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
207-391
               

               
Cow position:
               
chr22:39471952-39472136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
168, 138
               

               
Conread position:
               
207-398
               

               
Cow position:
               
chr22:6106168-6106361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
95, 119
               

               
Conread position:
               
207-414
               

               
Cow position:
               
chr22:42648917-42648711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
207-418
               

               
Cow position:
               
chr22:10351168-10350955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
207-419
               

               
Cow position:
               
chr22:4628765-4628547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
109, 74
               

               
Conread position:
               
207-424
               

               
Cow position:
               
chr22:14545719-14545936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
207-424
               

               
Cow position:
               
chr22:43238690-43238904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
207-428
               

               
Cow position:
               
chr22:22266525-22266293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 210
               

               
Conread position:
               
207-430
               

               
Cow position:
               
chr22:14488141-14487918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
207-430
               

               
Cow position:
               
chr22:26268053-26267833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
207-439
               

               
Cow position:
               
chr22:16340057-16339829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
209, 62
               

               
Conread position:
               
207-444
               

               
Cow position:
               
chr22:4656843-4657075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
231, 74
               

               
Conread position:
               
207-476
               

               
Cow position:
               
chr22:21527112-21526859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
231, 83
               

               
Conread position:
               
207-492
               

               
Cow position:
               
chr22:28340390-28340116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
207-501
               

               
Cow position:
               
chr22:34619012-34618711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 253
               

               
Conread position:
               
207-505
               

               
Cow position:
               
chr22:25690076-25690370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
184, 7
               

               
Conread position:
               
207-506
               

               
Cow position:
               
chr22:1659369-1659072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
207-507
               

               
Cow position:
               
chr22:17652635-17652342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
232, 83
               

               
Conread position:
               
207-530
               

               
Cow position:
               
chr22:41341744-41342059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
98, 239
               

               
Conread position:
               
207-580
               

               
Cow position:
               
chr22:43131350-43131714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 246
               

               
Conread position:
               
207-584
               

               
Cow position:
               
chr22:964970-965346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
167, 26
               

               
Conread position:
               
207-598
               

               
Cow position:
               
chr22:25764289-25764665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
207-598
               

               
Cow position:
               
chr22:26041809-26041418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
11, 249
               

               
Conread position:
               
207-624
               

               
Cow position:
               
chr22:23689002-23689410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 17
               

               
Conread position:
               
207-639
               

               
Cow position:
               
chr22:27826051-27825618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 250
               

               
Conread position:
               
207-670
               

               
Cow position:
               
chr22:42685085-42684650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 84
               

               
Conread position:
               
207-691
               

               
Cow position:
               
chr22:23833490-23833026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
174, 49
               

               
Conread position:
               
207-699
               

               
Cow position:
               
chr22:15950187-15950655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 38
               

               
Conread position:
               
207-737
               

               
Cow position:
               
chr22:1485070-1484543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 262
               

               
Conread position:
               
207-741
               

               
Cow position:
               
chr22:34616518-34615989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 314
               

               
Conread position:
               
207-742
               

               
Cow position:
               
chr22:16044196-16044753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 201
               

               
Conread position:
               
207-743
               

               
Cow position:
               
chr22:11613629-11613103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
207-743
               

               
Cow position:
               
chr22:27322501-27321998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
207-743
               

               
Cow position:
               
chr22:27577947-27577408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 7
               

               
Conread position:
               
208-339
               

               
Cow position:
               
chr22:6204220-6204351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
208-359
               

               
Cow position:
               
chr22:44018050-44018205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr22:23630154-23630352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
208-431
               

               
Cow position:
               
chr22:2876594-2876816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
208-514
               

               
Cow position:
               
chr22:3058858-3058555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
208-530
               

               
Cow position:
               
chr22:6852379-6852697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
208-554
               

               
Cow position:
               
chr22:17193596-17193250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
102, 158
               

               
Conread position:
               
208-590
               

               
Cow position:
               
chr22:17132205-17132583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
327, 233
               

               
Conread position:
               
208-626
               

               
Cow position:
               
chr22:8430092-8429677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 212
               

               
Conread position:
               
208-691
               

               
Cow position:
               
chr22:4060746-4061209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
208-737
               

               
Cow position:
               
chr22:27581627-27581131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 39
               

               
Conread position:
               
208-737
               

               
Cow position:
               
chr22:41044706-41045233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
208-742
               

               
Cow position:
               
chr22:38978044-38977524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
474, 64
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr22:18442544-18442709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr22:33522676-33522840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
209-380
               

               
Cow position:
               
chr22:4718306-4718140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
209-380
               

               
Cow position:
               
chr22:12673131-12673302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
209-380
               

               
Cow position:
               
chr22:29219701-29219871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 137
               

               
Conread position:
               
209-401
               

               
Cow position:
               
chr22:2036209-2036019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
209-408
               

               
Cow position:
               
chr22:16866241-16866036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
209-417
               

               
Cow position:
               
chr22:36209457-36209248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
209-443
               

               
Cow position:
               
chr22:43965904-43965665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
165, 183
               

               
Conread position:
               
209-522
               

               
Cow position:
               
chr22:23358353-23358044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
209-552
               

               
Cow position:
               
chr22:17120654-17120334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
252, 166
               

               
Conread position:
               
209-572
               

               
Cow position:
               
chr22:3566368-3566021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
209-577
               

               
Cow position:
               
chr22:12929077-12929433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
209-590
               

               
Cow position:
               
chr22:12800876-12800490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 98
               

               
Conread position:
               
209-683
               

               
Cow position:
               
chr22:37029405-37029864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
209-728
               

               
Cow position:
               
chr22:5291056-5290533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 231
               

               
Conread position:
               
209-734
               

               
Cow position:
               
chr22:59814-59303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 156
               

               
Conread position:
               
209-741
               

               
Cow position:
               
chr22:21568192-21567684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 40
               

               
Conread position:
               
209-742
               

               
Cow position:
               
chr22:10303216-10302687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 40
               

               
Conread position:
               
209-742
               

               
Cow position:
               
chr22:31870054-31870575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 95
               

               
Conread position:
               
209-743
               

               
Cow position:
               
chr22:32327000-32326485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 71
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr22:6289299-6289533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
210-443
               

               
Cow position:
               
chr22:16806789-16806564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
211-357
               

               
Cow position:
               
chr22:28690576-28690433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
211-381
               

               
Cow position:
               
chr22:30615930-30615762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
211-555
               

               
Cow position:
               
chr22:12830247-12830587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
187, 31
               

               
Conread position:
               
211-664
               

               
Cow position:
               
chr22:28357226-28356792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
211-681
               

               
Cow position:
               
chr22:23180847-23181294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 59
               

               
Conread position:
               
211-691
               

               
Cow position:
               
chr22:6709591-6710045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
79, 99
               

               
Conread position:
               
211-693
               

               
Cow position:
               
chr22:4993717-4994195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 38
               

               
Conread position:
               
211-737
               

               
Cow position:
               
chr22:25247108-25246591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 77
               

               
Conread position:
               
211-740
               

               
Cow position:
               
chr22:27819196-27818678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 85
               

               
Conread position:
               
211-743
               

               
Cow position:
               
chr22:5282712-5282183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 176
               

               
Conread position:
               
211-743
               

               
Cow position:
               
chr22:6092464-6092967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 39
               

               
Conread position:
               
211-743
               

               
Cow position:
               
chr22:32892895-32892375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
212-432
               

               
Cow position:
               
chr22:45375132-45374922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
89, 128
               

               
Conread position:
               
213-382
               

               
Cow position:
               
chr22:39493634-39493805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
213-398
               

               
Cow position:
               
chr22:33373440-33373254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
213-431
               

               
Cow position:
               
chr22:26804019-26803800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
213-507
               

               
Cow position:
               
chr22:24903788-24903498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
153, 77
               

               
Conread position:
               
213-729
               

               
Cow position:
               
chr22:21746835-21746328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 64
               

               
Conread position:
               
214-339
               

               
Cow position:
               
chr22:5644228-5644353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
214-356
               

               
Cow position:
               
chr22:29546833-29546696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
214-364
               

               
Cow position:
               
chr22:800177-800020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
214-371
               

               
Cow position:
               
chr22:10594806-10594650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
214-377
               

               
Cow position:
               
chr22:24557328-24557490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
214-383
               

               
Cow position:
               
chr22:27591397-27591224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
214-398
               

               
Cow position:
               
chr22:23209763-23209579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
214-426
               

               
Cow position:
               
chr22:16813991-16813785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
160, 81
               

               
Conread position:
               
214-426
               

               
Cow position:
               
chr22:47562907-47562690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 173
               

               
Conread position:
               
214-430
               

               
Cow position:
               
chr22:1865978-1865762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
214-431
               

               
Cow position:
               
chr22:1714666-1714883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
214-435
               

               
Cow position:
               
chr22:21905664-21905450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
214-440
               

               
Cow position:
               
chr22:24134127-24134350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
214-442
               

               
Cow position:
               
chr22:11352250-11352481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
75, 173
               

               
Conread position:
               
214-443
               

               
Cow position:
               
chr22:33985611-33985831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 81
               

               
Conread position:
               
214-446
               

               
Cow position:
               
chr22:5712780-5712554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
193, 32
               

               
Conread position:
               
214-483
               

               
Cow position:
               
chr22:42618191-42617933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
224, 26
               

               
Conread position:
               
214-501
               

               
Cow position:
               
chr22:12678225-12678505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
214-513
               

               
Cow position:
               
chr22:25254370-25254078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
173, 74
               

               
Conread position:
               
214-528
               

               
Cow position:
               
chr22:23735816-23736123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
214-538
               

               
Cow position:
               
chr22:37030328-37030642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
209, 63
               

               
Conread position:
               
214-559
               

               
Cow position:
               
chr22:8090339-8090670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
214-560
               

               
Cow position:
               
chr22:15668286-15668617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
8, 68
               

               
Conread position:
               
214-561
               

               
Cow position:
               
chr22:16094710-16095045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
98, 72
               

               
Conread position:
               
214-604
               

               
Cow position:
               
chr22:16823313-16822921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
75, 148
               

               
Conread position:
               
214-610
               

               
Cow position:
               
chr22:36432777-36433159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 14
               

               
Conread position:
               
214-618
               

               
Cow position:
               
chr22:12313615-12313222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 71
               

               
Conread position:
               
214-620
               

               
Cow position:
               
chr22:2524146-2523763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
176, 67
               

               
Conread position:
               
214-639
               

               
Cow position:
               
chr22:5616491-5616081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 11
               

               
Conread position:
               
214-646
               

               
Cow position:
               
chr22:6149192-6149611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 232
               

               
Conread position:
               
214-666
               

               
Cow position:
               
chr22:27550557-27550111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
214-686
               

               
Cow position:
               
chr22:1653990-1654461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 165
               

               
Conread position:
               
214-687
               

               
Cow position:
               
chr22:11370396-11370857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 40
               

               
Conread position:
               
214-687
               

               
Cow position:
               
chr22:13286644-13286177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 89
               

               
Conread position:
               
214-691
               

               
Cow position:
               
chr22:4563552-4563092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 65
               

               
Conread position:
               
214-693
               

               
Cow position:
               
chr22:26339960-26339487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 231
               

               
Conread position:
               
214-733
               

               
Cow position:
               
chr22:18020835-18021333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
214-735
               

               
Cow position:
               
chr22:38438962-38439475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
214-737
               

               
Cow position:
               
chr22:21890170-21890678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
214-739
               

               
Cow position:
               
chr22:30699361-30698860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 80
               

               
Conread position:
               
214-741
               

               
Cow position:
               
chr22:34609192-34608658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 32
               

               
Conread position:
               
214-742
               

               
Cow position:
               
chr22:29954818-29955321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
214-743
               

               
Cow position:
               
chr22:3250784-3251311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
214-743
               

               
Cow position:
               
chr22:3301140-3301647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 228
               

               
Conread position:
               
214-743
               

               
Cow position:
               
chr22:7154071-7153557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 75
               

               
Conread position:
               
214-743
               

               
Cow position:
               
chr22:8324444-8323922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 128
               

               
Conread position:
               
214-743
               

               
Cow position:
               
chr22:9977990-9977492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
475, 77
               

               
Conread position:
               
214-743
               

               
Cow position:
               
chr22:11813528-11814040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 100
               

               
Conread position:
               
214-743
               

               
Cow position:
               
chr22:25205768-25206295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 147
               

               
Conread position:
               
214-743
               

               
Cow position:
               
chr22:27635676-27635163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
90, 204
               

               
Conread position:
               
215-410
               

               
Cow position:
               
chr22:2184521-2184709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
215-410
               

               
Cow position:
               
chr22:7518749-7518558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
215-426
               

               
Cow position:
               
chr22:11189225-11189019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
114, 75
               

               
Conread position:
               
215-459
               

               
Cow position:
               
chr22:12902661-12902892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
215-533
               

               
Cow position:
               
chr22:12829414-12829728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
215-617
               

               
Cow position:
               
chr22:4373229-4372845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
131, 35
               

               
Conread position:
               
215-679
               

               
Cow position:
               
chr22:23115112-23115563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
215-693
               

               
Cow position:
               
chr22:534684-534219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 56
               

               
Conread position:
               
215-743
               

               
Cow position:
               
chr22:44717915-44717395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 71
               

               
Conread position:
               
216-371
               

               
Cow position:
               
chr22:16639502-16639346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
216-372
               

               
Cow position:
               
chr22:30583851-30583695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
216-380
               

               
Cow position:
               
chr22:24583878-24584037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 74
               

               
Conread position:
               
216-549
               

               
Cow position:
               
chr22:29961957-29962279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
191, 146
               

               
Conread position:
               
216-697
               

               
Cow position:
               
chr22:34441439-34441910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
217-399
               

               
Cow position:
               
chr22:14676881-14676699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
217-429
               

               
Cow position:
               
chr22:14641663-14641872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
217-443
               

               
Cow position:
               
chr22:17198331-17198107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
221, 31
               

               
Conread position:
               
217-624
               

               
Cow position:
               
chr22:41898256-41898652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
149, 64
               

               
Conread position:
               
217-737
               

               
Cow position:
               
chr22:32480274-32480784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 239
               

               
Conread position:
               
217-741
               

               
Cow position:
               
chr22:5467172-5467691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 61
               

               
Conread position:
               
217-743
               

               
Cow position:
               
chr22:13866861-13866327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 167
               

               
Conread position:
               
218-380
               

               
Cow position:
               
chr22:3540928-3541085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
218-384
               

               
Cow position:
               
chr22:2438783-2438948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
218-424
               

               
Cow position:
               
chr22:1710726-1710518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
218-426
               

               
Cow position:
               
chr22:7584051-7584249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
218-428
               

               
Cow position:
               
chr22:45104073-45104284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 194
               

               
Conread position:
               
218-441
               

               
Cow position:
               
chr22:14141149-14141371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
220, 80
               

               
Conread position:
               
218-443
               

               
Cow position:
               
chr22:12157657-12157874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
218-463
               

               
Cow position:
               
chr22:26056675-26056918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
224, 32
               

               
Conread position:
               
218-466
               

               
Cow position:
               
chr22:23675781-23676016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
220, 63
               

               
Conread position:
               
218-529
               

               
Cow position:
               
chr22:12892169-12892479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
113, 70
               

               
Conread position:
               
218-550
               

               
Cow position:
               
chr22:19827669-19827998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
218-656
               

               
Cow position:
               
chr22:25236937-25237376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 122
               

               
Conread position:
               
218-677
               

               
Cow position:
               
chr22:30269593-30269159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 46
               

               
Conread position:
               
218-703
               

               
Cow position:
               
chr22:1975812-1975331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 156
               

               
Conread position:
               
218-706
               

               
Cow position:
               
chr22:37202040-37201573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 73
               

               
Conread position:
               
218-741
               

               
Cow position:
               
chr22:16621384-16620856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 243
               

               
Conread position:
               
218-743
               

               
Cow position:
               
chr22:4535130-4535648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
218-743
               

               
Cow position:
               
chr22:10421245-10420684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
67, 241
               

               
Conread position:
               
218-743
               

               
Cow position:
               
chr22:21012577-21012068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
218-743
               

               
Cow position:
               
chr22:25361669-25361175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
220, 59
               

               
Conread position:
               
219-421
               

               
Cow position:
               
chr22:45771835-45772032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
219-429
               

               
Cow position:
               
chr22:16724497-16724703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
219-582
               

               
Cow position:
               
chr22:16053504-16053143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
219-590
               

               
Cow position:
               
chr22:530387-530749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
202, 63
               

               
Conread position:
               
219-743
               

               
Cow position:
               
chr22:14245247-14245735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
71, 134
               

               
Conread position:
               
220-573
               

               
Cow position:
               
chr22:42635242-42635587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
216, 78
               

               
Conread position:
               
220-598
               

               
Cow position:
               
chr22:12389292-12388910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 167
               

               
Conread position:
               
220-616
               

               
Cow position:
               
chr22:1849265-1848869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 83
               

               
Conread position:
               
220-635
               

               
Cow position:
               
chr22:3534121-3533734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
220-687
               

               
Cow position:
               
chr22:10609548-10609063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
220-731
               

               
Cow position:
               
chr22:16251375-16251878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 175
               

               
Conread position:
               
220-737
               

               
Cow position:
               
chr22:44180803-44180274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 247
               

               
Conread position:
               
220-743
               

               
Cow position:
               
chr22:10532683-10532171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 61
               

               
Conread position:
               
221-722
               

               
Cow position:
               
chr22:30094432-30093949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 60
               

               
Conread position:
               
222-743
               

               
Cow position:
               
chr22:4044111-4043612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
223-706
               

               
Cow position:
               
chr22:2404067-2403588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 75
               

               
Conread position:
               
224-737
               

               
Cow position:
               
chr22:13669981-13670486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 110
               

               
Conread position:
               
225-434
               

               
Cow position:
               
chr22:22433231-22433021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 191
               

               
Conread position:
               
226-381
               

               
Cow position:
               
chr22:1819347-1819504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
226-443
               

               
Cow position:
               
chr22:3470473-3470256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
140, 55
               

               
Conread position:
               
226-528
               

               
Cow position:
               
chr22:9597401-9597691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
226-622
               

               
Cow position:
               
chr22:14378508-14378885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 160
               

               
Conread position:
               
226-627
               

               
Cow position:
               
chr22:17126631-17126248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
236, 64
               

               
Conread position:
               
227-468
               

               
Cow position:
               
chr22:32514479-32514237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
181, 216
               

               
Conread position:
               
227-662
               

               
Cow position:
               
chr22:10315279-10314837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 166
               

               
Conread position:
               
229-430
               

               
Cow position:
               
chr22:27008218-27008017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
230-364
               

               
Cow position:
               
chr22:18441264-18441130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
230-683
               

               
Cow position:
               
chr22:28057862-28058303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
230-683
               

               
Cow position:
               
chr22:28146862-28146422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 237
               

               
Conread position:
               
230-743
               

               
Cow position:
               
chr22:31646663-31646169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 31
               

               
Conread position:
               
231-412
               

               
Cow position:
               
chr22:43526139-43525960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
231-743
               

               
Cow position:
               
chr22:45513345-45513845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 148
               

               
Conread position:
               
231-743
               

               
Cow position:
               
chr22:47741595-47741091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
201, 41
               

               
Conread position:
               
232-429
               

               
Cow position:
               
chr22:2644111-2643914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
65, 185
               

               
Conread position:
               
232-742
               

               
Cow position:
               
chr22:15068607-15068084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 95
               

               
Conread position:
               
232-743
               

               
Cow position:
               
chr22:30484082-30483594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 49
               

               
Conread position:
               
233-413
               

               
Cow position:
               
chr22:8331178-8330996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
233-558
               

               
Cow position:
               
chr22:21325559-21325875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
299, 29
               

               
Conread position:
               
234-525
               

               
Cow position:
               
chr22:43321527-43321239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
194, 88
               

               
Conread position:
               
234-564
               

               
Cow position:
               
chr22:17244755-17245065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
298, 180
               

               
Conread position:
               
234-741
               

               
Cow position:
               
chr22:30515446-30514932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 234
               

               
Conread position:
               
237-476
               

               
Cow position:
               
chr22:17119987-17119756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
201, 116
               

               
Conread position:
               
237-500
               

               
Cow position:
               
chr22:10756868-10756605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
201, 121
               

               
Conread position:
               
237-692
               

               
Cow position:
               
chr22:29014057-29013608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 141
               

               
Conread position:
               
242-364
               

               
Cow position:
               
chr22:31790811-31790933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
242-734
               

               
Cow position:
               
chr22:29289981-29290452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 28
               

               
Conread position:
               
250-409
               

               
Cow position:
               
chr22:9346887-9347043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
140, 103
               

               
Conread position:
               
250-594
               

               
Cow position:
               
chr22:15024949-15025282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 39
               

               
Conread position:
               
251-408
               

               
Cow position:
               
chr22:23801405-23801562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 146
               

               
Conread position:
               
251-701
               

               
Cow position:
               
chr22:766137-766560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
404, 41
               

               
Conread position:
               
251-743
               

               
Cow position:
               
chr22:4292913-4292455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 140
               

               
Conread position:
               
252-475
               

               
Cow position:
               
chr22:9171565-9171346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
185, 48
               

               
Conread position:
               
252-510
               

               
Cow position:
               
chr22:24915997-24915743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
169, 31
               

               
Conread position:
               
253-693
               

               
Cow position:
               
chr22:24509501-24509932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
260-743
               

               
Cow position:
               
chr22:33332993-33332483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 153
               

               
Conread position:
               
261-498
               

               
Cow position:
               
chr22:25846172-25846403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
271-551
               

               
Cow position:
               
chr22:25387468-25387190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
271-693
               

               
Cow position:
               
chr22:30114213-30113793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
182, 17
               

               
Conread position:
               
273-685
               

               
Cow position:
               
chr22:26659184-26658789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
274-743
               

               
Cow position:
               
chr22:5337460-5337922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
277-737
               

               
Cow position:
               
chr22:13769612-13769168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
111, 28
               

               
Conread position:
               
280-579
               

               
Cow position:
               
chr22:19173835-19173537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 171
               

               
Conread position:
               
280-675
               

               
Cow position:
               
chr22:2627712-2627322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 13
               

               
Conread position:
               
280-682
               

               
Cow position:
               
chr22:37324670-37324286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
280-743
               

               
Cow position:
               
chr22:4017606-4017151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 96
               

               
Conread position:
               
280-743
               

               
Cow position:
               
chr22:16812033-16812488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 13
               

               
Conread position:
               
280-743
               

               
Cow position:
               
chr22:21295594-21296048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
408, 19
               

               
Conread position:
               
280-743
               

               
Cow position:
               
chr22:26316589-26316154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 103
               

               
Conread position:
               
281-537
               

               
Cow position:
               
chr22:6936386-6936144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
281-617
               

               
Cow position:
               
chr22:21530227-21530547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
94, 130
               

               
Conread position:
               
281-639
               

               
Cow position:
               
chr22:43119597-43119947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
156, 165
               

               
Conread position:
               
281-659
               

               
Cow position:
               
chr22:22223321-22222954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
281-671
               

               
Cow position:
               
chr22:3965318-3964935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 168
               

               
Conread position:
               
281-682
               

               
Cow position:
               
chr22:28665416-28665007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 167
               

               
Conread position:
               
281-691
               

               
Cow position:
               
chr22:23855103-23854710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
281-691
               

               
Cow position:
               
chr22:32895349-32894933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
281-701
               

               
Cow position:
               
chr22:3317254-3316849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
281-714
               

               
Cow position:
               
chr22:3950384-3949945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 95
               

               
Conread position:
               
281-726
               

               
Cow position:
               
chr22:2502958-2502530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 107
               

               
Conread position:
               
281-741
               

               
Cow position:
               
chr22:13841270-13840821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
281-743
               

               
Cow position:
               
chr22:17294805-17295247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
442, 24
               

               
Conread position:
               
281-743
               

               
Cow position:
               
chr22:23176308-23176784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 166
               

               
Conread position:
               
281-743
               

               
Cow position:
               
chr22:27328761-27329210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 132
               

               
Conread position:
               
282-737
               

               
Cow position:
               
chr22:32188723-32189157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 164
               

               
Conread position:
               
285-502
               

               
Cow position:
               
chr22:10553557-10553771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
143, 163
               

               
Conread position:
               
286-578
               

               
Cow position:
               
chr22:2912465-2912743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
286-689
               

               
Cow position:
               
chr22:1591150-1590753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 23
               

               
Conread position:
               
286-743
               

               
Cow position:
               
chr22:877642-877198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 155
               

               
Conread position:
               
287-688
               

               
Cow position:
               
chr22:26141401-26141007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
287-743
               

               
Cow position:
               
chr22:30818596-30819049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 92
               

               
Conread position:
               
288-583
               

               
Cow position:
               
chr22:22908311-22908025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
150, 77
               

               
Conread position:
               
290-595
               

               
Cow position:
               
chr22:24628535-24628828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
35, 31
               

               
Conread position:
               
293-679
               

               
Cow position:
               
chr22:12967948-12968327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 146
               

               
Conread position:
               
293-733
               

               
Cow position:
               
chr22:30049446-30049887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 162
               

               
Conread position:
               
293-737
               

               
Cow position:
               
chr22:23857167-23856729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 153
               

               
Conread position:
               
293-742
               

               
Cow position:
               
chr22:17814352-17813913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 83
               

               
Conread position:
               
294-734
               

               
Cow position:
               
chr22:8481763-8481332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 27
               

               
Conread position:
               
294-740
               

               
Cow position:
               
chr22:14924613-14925042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
398, 144
               

               
Conread position:
               
294-743
               

               
Cow position:
               
chr22:1279266-1279711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 88
               

               
Conread position:
               
294-743
               

               
Cow position:
               
chr22:21502863-21502411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 38
               

               
Conread position:
               
295-742
               

               
Cow position:
               
chr22:41245373-41244918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
296-572
               

               
Cow position:
               
chr22:15020296-15020557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
142, 71
               

               
Conread position:
               
296-740
               

               
Cow position:
               
chr22:34712842-34712399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 34
               

               
Conread position:
               
296-743
               

               
Cow position:
               
chr22:590455-590023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 9
               

               
Conread position:
               
299-559
               

               
Cow position:
               
chr22:25540113-25539849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
129, 211
               

               
Conread position:
               
299-689
               

               
Cow position:
               
chr22:25742835-25743221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 138
               

               
Conread position:
               
299-743
               

               
Cow position:
               
chr22:1265810-1266264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 304
               

               
Conread position:
               
300-616
               

               
Cow position:
               
chr22:23121889-23122221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
300-743
               

               
Cow position:
               
chr22:24734202-24734636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
300-743
               

               
Cow position:
               
chr22:25943587-25943156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 5
               

               
Conread position:
               
301-743
               

               
Cow position:
               
chr22:15338225-15337792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
301-743
               

               
Cow position:
               
chr22:45846253-45845800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
291, 23
               

               
Conread position:
               
302-742
               

               
Cow position:
               
chr22:26184050-26184484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 105
               

               
Conread position:
               
303-669
               

               
Cow position:
               
chr22:7852074-7851711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 112
               

               
Conread position:
               
303-693
               

               
Cow position:
               
chr22:15090851-15090466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 9
               

               
Conread position:
               
305-567
               

               
Cow position:
               
chr22:20475174-20475425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 70
               

               
Conread position:
               
305-662
               

               
Cow position:
               
chr22:5384760-5384414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
135, 41
               

               
Conread position:
               
305-691
               

               
Cow position:
               
chr22:34750781-34750407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
305-743
               

               
Cow position:
               
chr22:46567786-46568214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
306-624
               

               
Cow position:
               
chr22:11458922-11458621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
306-662
               

               
Cow position:
               
chr22:23403535-23403882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
306-704
               

               
Cow position:
               
chr22:19047709-19048085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
132, 71
               

               
Conread position:
               
308-595
               

               
Cow position:
               
chr22:9283494-9283776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
310-690
               

               
Cow position:
               
chr22:27480998-27480622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
82, 65
               

               
Conread position:
               
311-629
               

               
Cow position:
               
chr22:17125684-17125374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
110, 65
               

               
Conread position:
               
311-741
               

               
Cow position:
               
chr22:4645873-4645455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 11
               

               
Conread position:
               
312-697
               

               
Cow position:
               
chr22:21355040-21355416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
126, 134
               

               
Conread position:
               
320-743
               

               
Cow position:
               
chr22:11257656-11258063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 11
               

               
Conread position:
               
330-582
               

               
Cow position:
               
chr22:27835616-27835365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
330-691
               

               
Cow position:
               
chr22:19775351-19775695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
331-743
               

               
Cow position:
               
chr22:34398374-34398780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 119
               

               
Conread position:
               
338-743
               

               
Cow position:
               
chr22:43291827-43292227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 39
               

               
Conread position:
               
339-635
               

               
Cow position:
               
chr22:13849379-13849664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 44
               

               
Conread position:
               
339-681
               

               
Cow position:
               
chr22:31592782-31593121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
349-742
               

               
Cow position:
               
chr22:36358482-36358090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
349-743
               

               
Cow position:
               
chr22:16883164-16883556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 82
               

               
Conread position:
               
352-574
               

               
Cow position:
               
chr22:1874755-1874536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 110
               

               
Conread position:
               
352-702
               

               
Cow position:
               
chr22:3993671-3993329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
356-743
               

               
Cow position:
               
chr22:26097563-26097935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
377-743
               

               
Cow position:
               
chr22:11500815-11500456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
389-668
               

               
Cow position:
               
chr22:25629740-25630020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
217, 52
               

               
Conread position:
               
389-743
               

               
Cow position:
               
chr22:39494173-39494529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
393-743
               

               
Cow position:
               
chr22:30710421-30710080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
396-712
               

               
Cow position:
               
chr22:14602374-14602687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
400-658
               

               
Cow position:
               
chr22:27512142-27512401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 170
               

               
Conread position:
               
400-691
               

               
Cow position:
               
chr22:25342029-25341750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
402-684
               

               
Cow position:
               
chr22:28731688-28731423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
402-737
               

               
Cow position:
               
chr22:30712771-30712430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
403-574
               

               
Cow position:
               
chr22:10292978-10292805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
403-627
               

               
Cow position:
               
chr22:1602200-1601977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
135, 44
               

               
Conread position:
               
403-743
               

               
Cow position:
               
chr22:18654033-18654377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
403-743
               

               
Cow position:
               
chr22:28179868-28179519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 174
               

               
Conread position:
               
411-741
               

               
Cow position:
               
chr22:2434041-2433717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
413-691
               

               
Cow position:
               
chr22:6360486-6360760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
434-673
               

               
Cow position:
               
chr22:12946182-12946418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
15, 149
               

               
Conread position:
               
446-737
               

               
Cow position:
               
chr22:13242411-13242117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
448-706
               

               
Cow position:
               
chr22:6204323-6204579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
16, 118
               

               
Conread position:
               
449-675
               

               
Cow position:
               
chr22:1081470-1081241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
138, 24
               

               
Conread position:
               
450-588
               

               
Cow position:
               
chr22:26969749-26969611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
450-663
               

               
Cow position:
               
chr22:22146198-22145986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
140, 204
               

               
Conread position:
               
450-723
               

               
Cow position:
               
chr22:38547781-38547504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 125
               

               
Conread position:
               
451-640
               

               
Cow position:
               
chr22:3945141-3944955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 142
               

               
Conread position:
               
451-662
               

               
Cow position:
               
chr22:4026571-4026367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
451-682
               

               
Cow position:
               
chr22:35520291-35520524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 79
               

               
Conread position:
               
451-737
               

               
Cow position:
               
chr22:27385069-27385361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
451-743
               

               
Cow position:
               
chr22:3960318-3960621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
451-743
               

               
Cow position:
               
chr22:10363035-10362748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
81, 194
               

               
Conread position:
               
451-743
               

               
Cow position:
               
chr22:30473012-30472721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
452-594
               

               
Cow position:
               
chr22:3241734-3241873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
452-658
               

               
Cow position:
               
chr22:20687268-20687056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 120
               

               
Conread position:
               
452-687
               

               
Cow position:
               
chr22:2141773-2141550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
452-743
               

               
Cow position:
               
chr22:5042282-5042003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 78
               

               
Conread position:
               
452-743
               

               
Cow position:
               
chr22:26107022-26106733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 89
               

               
Conread position:
               
455-629
               

               
Cow position:
               
chr22:18218926-18219102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
455-635
               

               
Cow position:
               
chr22:10403538-10403710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
455-724
               

               
Cow position:
               
chr22:26490422-26490153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 145
               

               
Conread position:
               
455-737
               

               
Cow position:
               
chr22:2560289-2560569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
118, 238
               

               
Conread position:
               
455-737
               

               
Cow position:
               
chr22:7913440-7913160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
456-616
               

               
Cow position:
               
chr22:7252682-7252843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
456-701
               

               
Cow position:
               
chr22:8446899-8446652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
159, 82
               

               
Conread position:
               
456-723
               

               
Cow position:
               
chr22:1974186-1974459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
237, 0
               

               
Conread position:
               
457-585
               

               
Cow position:
               
chr22:11497159-11497025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
457-653
               

               
Cow position:
               
chr22:10585747-10585933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
459-660
               

               
Cow position:
               
chr22:3541765-3541957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
185, 103
               

               
Conread position:
               
464-710
               

               
Cow position:
               
chr22:28639164-28639407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
464-737
               

               
Cow position:
               
chr22:16235697-16235969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 99
               

               
Conread position:
               
464-743
               

               
Cow position:
               
chr22:8772826-8773108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
167, 176
               

               
Conread position:
               
464-743
               

               
Cow position:
               
chr22:11753484-11753756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
171, 81
               

               
Conread position:
               
464-743
               

               
Cow position:
               
chr22:32487503-32487782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
235, 136
               

               
Conread position:
               
466-743
               

               
Cow position:
               
chr22:21593589-21593307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
165, 174
               

               
Conread position:
               
467-714
               

               
Cow position:
               
chr22:6633153-6633400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
467-741
               

               
Cow position:
               
chr22:11987265-11987537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
467-742
               

               
Cow position:
               
chr22:44402586-44402308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
181, 164
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr22:556159-556438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
232, 0
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr22:3942234-3941957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
236, 133
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr22:6925199-6924920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
232, 0
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr22:17324325-17324604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 173
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr22:19241235-19241514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 173
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr22:29398256-29397979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
164, 79
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr22:34172628-34172349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
467-743
               

               
Cow position:
               
chr22:39464368-39464641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
164, 79
               

               
Conread position:
               
468-683
               

               
Cow position:
               
chr22:44386458-44386660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
468-728
               

               
Cow position:
               
chr22:38549740-38549489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
471-743
               

               
Cow position:
               
chr22:30583437-30583165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
229, 67
               

               
Conread position:
               
474-673
               

               
Cow position:
               
chr22:294993-295189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
479-702
               

               
Cow position:
               
chr22:33949062-33949285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
176, 59
               

               
Conread position:
               
481-743
               

               
Cow position:
               
chr22:8767278-8767023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
481-743
               

               
Cow position:
               
chr22:47525640-47525387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
222, 22
               

               
Conread position:
               
487-739
               

               
Cow position:
               
chr22:36208866-36208607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
487-743
               

               
Cow position:
               
chr22:30854355-30854097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
104, 157
               

               
Conread position:
               
488-743
               

               
Cow position:
               
chr22:1710501-1710239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 77
               

               
Conread position:
               
494-670
               

               
Cow position:
               
chr22:3253025-3253185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
496-743
               

               
Cow position:
               
chr22:28937978-28938233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
503-691
               

               
Cow position:
               
chr22:13720610-13720795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
110, 76
               

               
Conread position:
               
504-732
               

               
Cow position:
               
chr22:22013632-22013407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
195, 75
               
Show alignments to all cow chromosomes.