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Cow genome map

           
Conread name:
           
Ova1-OVRM10106C09
        

               
Conread position:
               
1-170
               

               
Cow position:
               
chr23:9713351-9713189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 53
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr23:1655923-1655748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
152, 49
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr23:32479997-32480186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
138, 51
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr23:5436614-5436795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
158, 57
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr23:349694-349880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
155, 41
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr23:26942471-26942284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr23:27029977-27029773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 165
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr23:1767857-1767672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr23:33622121-33622310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr23:4329646-4329840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr23:23114061-23113870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
152, 54
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr23:1921198-1921389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr23:12334239-12334038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 49
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr23:1636306-1636093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr23:4726823-4726598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
201, 66
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr23:33570163-33569946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr23:34356671-34356444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr23:38973879-38973653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr23:20248666-20248901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
199, 49
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr23:1742386-1742147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr23:40648703-40648941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
199, 56
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr23:5723574-5723319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 56
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr23:6158170-6158439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
54, 166
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr23:6994954-6995201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr23:1923808-1924064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr23:1398010-1398269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
151, 47
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr23:1670931-1670685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr23:6767934-6767657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 161
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr23:24704313-24704044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
199, 49
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr23:10416392-10416658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
116, 56
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr23:18322394-18322656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
207, 43
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr23:20056835-20057104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr23:27563672-27563946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr23:10014569-10014306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr23:10553980-10554250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 47
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr23:11129262-11128995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 53
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr23:14164369-14164639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 56
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr23:18402261-18402525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr23:36309449-36309188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr23:38503077-38503365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
121, 54
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr23:39775755-39775476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr23:21336455-21336752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 56
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr23:4528848-4529154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr23:37065878-37065575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 56
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr23:22804753-22804459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr23:16700013-16700302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 54
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr23:3262468-3262765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
199, 49
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr23:21446148-21445843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
149, 55
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr23:4562914-4562591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
204, 49
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr23:15743120-15742799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr23:13555409-13555760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
316, 49
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr23:5603257-5603508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr23:33940130-33940395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
6, 49
               

               
Conread position:
               
3-158
               

               
Cow position:
               
chr23:39573223-39573373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr23:7574597-7574801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
52, 5
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr23:13599369-13599103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 52
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr23:21452703-21452972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
7-259
               

               
Cow position:
               
chr23:39028803-39028570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
7-283
               

               
Cow position:
               
chr23:1647641-1647391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
7-285
               

               
Cow position:
               
chr23:9594810-9595068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
123, 43
               

               
Conread position:
               
7-299
               

               
Cow position:
               
chr23:29242972-29242691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 41
               

               
Conread position:
               
8-223
               

               
Cow position:
               
chr23:22414278-22414491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
115, 38
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr23:1290319-1290077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
190, 34
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr23:38208748-38208479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
142, 42
               

               
Conread position:
               
8-279
               

               
Cow position:
               
chr23:27544849-27544598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
8-279
               

               
Cow position:
               
chr23:34314932-34315204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
134, 50
               

               
Conread position:
               
8-280
               

               
Cow position:
               
chr23:5162455-5162197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
8-281
               

               
Cow position:
               
chr23:26632826-26632563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 49
               

               
Conread position:
               
8-282
               

               
Cow position:
               
chr23:15287116-15287370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
192, 47
               

               
Conread position:
               
8-283
               

               
Cow position:
               
chr23:19978932-19979185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
186, 42
               

               
Conread position:
               
8-285
               

               
Cow position:
               
chr23:1254709-1254438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
144, 40
               

               
Conread position:
               
8-285
               

               
Cow position:
               
chr23:1883416-1883154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
170, 40
               

               
Conread position:
               
8-285
               

               
Cow position:
               
chr23:1885151-1885415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 47
               

               
Conread position:
               
8-285
               

               
Cow position:
               
chr23:2055726-2055463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 49
               

               
Conread position:
               
8-285
               

               
Cow position:
               
chr23:6592678-6592932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
144, 42
               

               
Conread position:
               
8-285
               

               
Cow position:
               
chr23:16582888-16583148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
142, 49
               

               
Conread position:
               
8-285
               

               
Cow position:
               
chr23:38455157-38455424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 42
               

               
Conread position:
               
8-309
               

               
Cow position:
               
chr23:3208597-3208880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
281, 41
               

               
Conread position:
               
8-310
               

               
Cow position:
               
chr23:10853077-10852786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
146, 42
               

               
Conread position:
               
9-262
               

               
Cow position:
               
chr23:21659966-21659720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
9-263
               

               
Cow position:
               
chr23:1068295-1068531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
163, 41
               

               
Conread position:
               
9-271
               

               
Cow position:
               
chr23:3955439-3955193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
251, 57
               

               
Conread position:
               
9-275
               

               
Cow position:
               
chr23:41472642-41472379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
9-285
               

               
Cow position:
               
chr23:4608361-4608621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
10-274
               

               
Cow position:
               
chr23:24867329-24867073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
192, 41
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr23:40891382-40891130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
10-282
               

               
Cow position:
               
chr23:11045507-11045248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr23:670639-670383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
190, 40
               

               
Conread position:
               
10-285
               

               
Cow position:
               
chr23:39753136-39752875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
190, 39
               

               
Conread position:
               
10-309
               

               
Cow position:
               
chr23:19002042-19002333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
140, 41
               

               
Conread position:
               
10-327
               

               
Cow position:
               
chr23:2501834-2502130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
11-278
               

               
Cow position:
               
chr23:5152012-5151755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
11-285
               

               
Cow position:
               
chr23:4968505-4968758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
143, 39
               

               
Conread position:
               
12-275
               

               
Cow position:
               
chr23:4996077-4996319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
125, 43
               

               
Conread position:
               
14-309
               

               
Cow position:
               
chr23:32961347-32961635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
200, 30
               

               
Conread position:
               
18-283
               

               
Cow position:
               
chr23:38854723-38854971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
28-246
               

               
Cow position:
               
chr23:30585649-30585863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
32-252
               

               
Cow position:
               
chr23:5191524-5191325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
35-267
               

               
Cow position:
               
chr23:28894952-28895190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
96, 36
               

               
Conread position:
               
43-283
               

               
Cow position:
               
chr23:360919-361147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr23:18037272-18037099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
50-250
               

               
Cow position:
               
chr23:1700896-1700705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
152, 33
               

               
Conread position:
               
50-276
               

               
Cow position:
               
chr23:4499139-4499367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 108
               

               
Conread position:
               
50-309
               

               
Cow position:
               
chr23:479524-479264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
60-279
               

               
Cow position:
               
chr23:13520430-13520223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
61-250
               

               
Cow position:
               
chr23:4942130-4942308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
61-309
               

               
Cow position:
               
chr23:2316778-2316543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
68-282
               

               
Cow position:
               
chr23:14189583-14189794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
146, 118
               

               
Conread position:
               
69-288
               

               
Cow position:
               
chr23:4523006-4523218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
71-238
               

               
Cow position:
               
chr23:19371100-19371264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
143, 79
               

               
Conread position:
               
71-243
               

               
Cow position:
               
chr23:30999549-30999377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
134, 88
               

               
Conread position:
               
71-246
               

               
Cow position:
               
chr23:29786377-29786554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
71-257
               

               
Cow position:
               
chr23:18296779-18296595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
71-257
               

               
Cow position:
               
chr23:21764888-21764705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
71-272
               

               
Cow position:
               
chr23:9734385-9734187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
71-275
               

               
Cow position:
               
chr23:1803761-1803560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
71-276
               

               
Cow position:
               
chr23:27862301-27862100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
71-279
               

               
Cow position:
               
chr23:587370-587161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
130, 86
               

               
Conread position:
               
71-279
               

               
Cow position:
               
chr23:7845262-7845055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
71-282
               

               
Cow position:
               
chr23:35254268-35254475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
151, 73
               

               
Conread position:
               
71-283
               

               
Cow position:
               
chr23:13511705-13511496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 54
               

               
Conread position:
               
71-284
               

               
Cow position:
               
chr23:22530445-22530655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr23:26949170-26948951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
129, 78
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr23:29345790-29345998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr23:33601557-33601763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
71-309
               

               
Cow position:
               
chr23:14739414-14739187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
71-334
               

               
Cow position:
               
chr23:36199261-36199003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
246, 75
               

               
Conread position:
               
72-276
               

               
Cow position:
               
chr23:5617547-5617345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
72-284
               

               
Cow position:
               
chr23:1605646-1605441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
72-285
               

               
Cow position:
               
chr23:3247554-3247349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
72-285
               

               
Cow position:
               
chr23:18802301-18802512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
72-285
               

               
Cow position:
               
chr23:20194947-20195157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
72-285
               

               
Cow position:
               
chr23:25675730-25675922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
73-285
               

               
Cow position:
               
chr23:7596363-7596570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
74-279
               

               
Cow position:
               
chr23:25378622-25378422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
75-241
               

               
Cow position:
               
chr23:16847934-16847766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
75-244
               

               
Cow position:
               
chr23:1188938-1189101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
75-246
               

               
Cow position:
               
chr23:16631236-16631063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
81, 65
               

               
Conread position:
               
75-246
               

               
Cow position:
               
chr23:30656208-30656376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
160, 84
               

               
Conread position:
               
75-257
               

               
Cow position:
               
chr23:31739826-31739646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
75-257
               

               
Cow position:
               
chr23:40789943-40789773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
75-259
               

               
Cow position:
               
chr23:29443654-29443840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
75-276
               

               
Cow position:
               
chr23:6720316-6720508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
110, 91
               

               
Conread position:
               
75-276
               

               
Cow position:
               
chr23:20171543-20171344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
75-276
               

               
Cow position:
               
chr23:22396482-22396677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
139, 37
               

               
Conread position:
               
75-279
               

               
Cow position:
               
chr23:12050325-12050131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
75-280
               

               
Cow position:
               
chr23:25189311-25189104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 131
               

               
Conread position:
               
75-283
               

               
Cow position:
               
chr23:809134-808927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 129
               

               
Conread position:
               
75-283
               

               
Cow position:
               
chr23:7402670-7402469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
75-283
               

               
Cow position:
               
chr23:33711728-33711531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
75-285
               

               
Cow position:
               
chr23:344208-344417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 84
               

               
Conread position:
               
75-285
               

               
Cow position:
               
chr23:406206-406397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
75-285
               

               
Cow position:
               
chr23:14838775-14838974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
75-285
               

               
Cow position:
               
chr23:18698056-18698265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
75-285
               

               
Cow position:
               
chr23:26794946-26795143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
76-254
               

               
Cow position:
               
chr23:1776668-1776840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
76-274
               

               
Cow position:
               
chr23:25864728-25864913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
76-282
               

               
Cow position:
               
chr23:1009435-1009638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
76-283
               

               
Cow position:
               
chr23:33232944-33233146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 114
               

               
Conread position:
               
76-284
               

               
Cow position:
               
chr23:21343285-21343488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
76-285
               

               
Cow position:
               
chr23:1337335-1337544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
124, 81
               

               
Conread position:
               
76-285
               

               
Cow position:
               
chr23:11380287-11380497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 77
               

               
Conread position:
               
76-285
               

               
Cow position:
               
chr23:11845240-11845049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
76-285
               

               
Cow position:
               
chr23:18367665-18367456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
53, 130
               

               
Conread position:
               
76-285
               

               
Cow position:
               
chr23:40778232-40778024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 81
               

               
Conread position:
               
76-311
               

               
Cow position:
               
chr23:8293471-8293236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
6, 82
               

               
Conread position:
               
77-232
               

               
Cow position:
               
chr23:4104368-4104219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
77-255
               

               
Cow position:
               
chr23:23409704-23409536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
77-285
               

               
Cow position:
               
chr23:10085219-10085422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
77-285
               

               
Cow position:
               
chr23:28053238-28053038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
77-285
               

               
Cow position:
               
chr23:39793415-39793214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
135, 82
               

               
Conread position:
               
78-268
               

               
Cow position:
               
chr23:20557882-20558082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
78-276
               

               
Cow position:
               
chr23:15710109-15710309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
75, 130
               

               
Conread position:
               
78-282
               

               
Cow position:
               
chr23:37992948-37992752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
78-388
               

               
Cow position:
               
chr23:534191-533883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
209, 69
               

               
Conread position:
               
81-199
               

               
Cow position:
               
chr23:18107381-18107500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
82-201
               

               
Cow position:
               
chr23:18416087-18416206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
82-285
               

               
Cow position:
               
chr23:11473549-11473748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
121, 53
               

               
Conread position:
               
84-309
               

               
Cow position:
               
chr23:187135-186908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
116, 75
               

               
Conread position:
               
86-267
               

               
Cow position:
               
chr23:16690100-16690284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
86-285
               

               
Cow position:
               
chr23:24509657-24509464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
114, 73
               

               
Conread position:
               
86-309
               

               
Cow position:
               
chr23:31601496-31601721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
70, 195
               

               
Conread position:
               
91-271
               

               
Cow position:
               
chr23:4421032-4421203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
94-276
               

               
Cow position:
               
chr23:3910055-3910237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 108
               

               
Conread position:
               
95-285
               

               
Cow position:
               
chr23:1536270-1536089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
95-285
               

               
Cow position:
               
chr23:29330049-29329858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 55
               

               
Conread position:
               
95-309
               

               
Cow position:
               
chr23:5870233-5870448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 92
               

               
Conread position:
               
97-259
               

               
Cow position:
               
chr23:2457408-2457248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
97-285
               

               
Cow position:
               
chr23:2282230-2282413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
103, 62
               

               
Conread position:
               
97-320
               

               
Cow position:
               
chr23:2259651-2259872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
98-276
               

               
Cow position:
               
chr23:41348701-41348880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
105, 55
               

               
Conread position:
               
98-285
               

               
Cow position:
               
chr23:2179699-2179886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
99-259
               

               
Cow position:
               
chr23:18902105-18902265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
99-285
               

               
Cow position:
               
chr23:4740526-4740718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
99-285
               

               
Cow position:
               
chr23:19758681-19758862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
99-308
               

               
Cow position:
               
chr23:39309172-39309377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
102-285
               

               
Cow position:
               
chr23:38414023-38414196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
106-283
               

               
Cow position:
               
chr23:8698377-8698206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
107-285
               

               
Cow position:
               
chr23:4972715-4972543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
109-276
               

               
Cow position:
               
chr23:28118167-28118334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-285
               

               
Cow position:
               
chr23:14895869-14896042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
112-277
               

               
Cow position:
               
chr23:7485007-7484847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
116-285
               

               
Cow position:
               
chr23:4338678-4338846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
84, 43
               
Show alignments to all cow chromosomes.