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Cow genome map

           
Conread name:
           
Ova1-OVRM10106C09
        

               
Conread position:
               
1-152
               

               
Cow position:
               
chr27:22225665-22225526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr27:4858709-4858540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr27:29380783-29380966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
152, 49
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr27:23545399-23545206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
160, 48
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr27:18491770-18491975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
206, 54
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr27:3306704-3306921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr27:26489978-26489754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
194, 50
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:7731327-7731098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
155, 88
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr27:11480706-11480470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr27:30354414-30354155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr27:706880-707137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr27:21393577-21393309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 47
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr27:18558287-18558559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
200, 53
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr27:19660862-19661138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
148, 54
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr27:19546584-19546308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr27:25277070-25277332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 49
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:536393-536654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:1768693-1768438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:10307370-10307098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
150, 54
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:12246583-12246857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
263, 65
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:13318044-13317757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
58, 159
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:21453164-21452873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
68, 285
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:23070429-23070163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:24999810-24999537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
198, 49
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:27038911-27038647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:27040532-27040806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 49
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:27844068-27843795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 53
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:28001882-28001621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:30359337-30359592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr27:30582664-30582935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
202, 83
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr27:24446227-24445936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr27:1353513-1353804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
173, 49
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr27:2592473-2592762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr27:27259544-27259865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr27:6350909-6350715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
142, 45
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr27:22454844-22454582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
179, 48
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr27:30868809-30868520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
198, 48
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr27:9169716-9169470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr27:18593199-18593460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
7-276
               

               
Cow position:
               
chr27:17397518-17397257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
182, 50
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chr27:20283580-20283853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
8-152
               

               
Cow position:
               
chr27:26979775-26979639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
8-158
               

               
Cow position:
               
chr27:6925022-6925164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
8-191
               

               
Cow position:
               
chr27:8263400-8263229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 46
               

               
Conread position:
               
8-195
               

               
Cow position:
               
chr27:20570056-20570232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
8-227
               

               
Cow position:
               
chr27:715438-715647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
197, 20
               

               
Conread position:
               
8-246
               

               
Cow position:
               
chr27:27270605-27270378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
8-254
               

               
Cow position:
               
chr27:15643110-15643343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
192, 42
               

               
Conread position:
               
8-279
               

               
Cow position:
               
chr27:31373050-31372787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
5, 53
               

               
Conread position:
               
8-281
               

               
Cow position:
               
chr27:16705188-16705441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
8-285
               

               
Cow position:
               
chr27:815300-815562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
8-285
               

               
Cow position:
               
chr27:18543929-18544195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
142, 49
               

               
Conread position:
               
8-285
               

               
Cow position:
               
chr27:20552841-20552572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 46
               

               
Conread position:
               
8-285
               

               
Cow position:
               
chr27:30764968-30765229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
8-287
               

               
Cow position:
               
chr27:14902716-14902450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
8-308
               

               
Cow position:
               
chr27:26919974-26919693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
8-309
               

               
Cow position:
               
chr27:28931865-28931566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 29
               

               
Conread position:
               
9-186
               

               
Cow position:
               
chr27:22559889-22559721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
140, 42
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr27:27641074-27640802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 48
               

               
Conread position:
               
9-285
               

               
Cow position:
               
chr27:30362184-30362440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr27:23890877-23891093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
10-309
               

               
Cow position:
               
chr27:13411427-13411139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
144, 47
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr27:8942745-8942451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
279, 45
               

               
Conread position:
               
11-155
               

               
Cow position:
               
chr27:15215170-15215305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
11-280
               

               
Cow position:
               
chr27:16237849-16238083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
11-285
               

               
Cow position:
               
chr27:25379930-25380188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
13-285
               

               
Cow position:
               
chr27:25790746-25791001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
14-285
               

               
Cow position:
               
chr27:26398315-26398062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
18-181
               

               
Cow position:
               
chr27:29236525-29236677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
18-213
               

               
Cow position:
               
chr27:4011626-4011805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
18-222
               

               
Cow position:
               
chr27:7538132-7537938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
135, 33
               

               
Conread position:
               
18-267
               

               
Cow position:
               
chr27:19387951-19388199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
18-277
               

               
Cow position:
               
chr27:22418823-22418574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 32
               

               
Conread position:
               
18-284
               

               
Cow position:
               
chr27:15867343-15867587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
18-285
               

               
Cow position:
               
chr27:1183937-1183679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
18-285
               

               
Cow position:
               
chr27:13875675-13875929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 32
               

               
Conread position:
               
18-285
               

               
Cow position:
               
chr27:15454155-15454410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
255, 48
               

               
Conread position:
               
18-285
               

               
Cow position:
               
chr27:19685766-19685517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
18-285
               

               
Cow position:
               
chr27:28018285-28018534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
182, 28
               

               
Conread position:
               
21-283
               

               
Cow position:
               
chr27:23929925-23930160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
27-280
               

               
Cow position:
               
chr27:29399759-29400011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
201, 130
               

               
Conread position:
               
42-285
               

               
Cow position:
               
chr27:7958881-7958638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
46-242
               

               
Cow position:
               
chr27:29905565-29905758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
47-283
               

               
Cow position:
               
chr27:911118-910889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
49-276
               

               
Cow position:
               
chr27:26413287-26413066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
5, 27
               

               
Conread position:
               
49-284
               

               
Cow position:
               
chr27:26959648-26959424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
51-276
               

               
Cow position:
               
chr27:11536131-11535907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
58-235
               

               
Cow position:
               
chr27:28467476-28467290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
58-285
               

               
Cow position:
               
chr27:23554354-23554122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
60-310
               

               
Cow position:
               
chr27:12231932-12231688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
60-342
               

               
Cow position:
               
chr27:13251986-13252268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
140, 20
               

               
Conread position:
               
61-255
               

               
Cow position:
               
chr27:22268479-22268673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
139, 98
               

               
Conread position:
               
61-285
               

               
Cow position:
               
chr27:11081172-11081393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
95, 143
               

               
Conread position:
               
61-285
               

               
Cow position:
               
chr27:31147691-31147476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
139, 14
               

               
Conread position:
               
62-285
               

               
Cow position:
               
chr27:8430459-8430242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
138, 71
               

               
Conread position:
               
67-238
               

               
Cow position:
               
chr27:14343481-14343316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
70-255
               

               
Cow position:
               
chr27:29184851-29184674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
70-270
               

               
Cow position:
               
chr27:6787942-6788142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
130, 87
               

               
Conread position:
               
70-285
               

               
Cow position:
               
chr27:30914994-30915199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
71-187
               

               
Cow position:
               
chr27:4482868-4482755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
71-212
               

               
Cow position:
               
chr27:8168443-8168300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 87
               

               
Conread position:
               
71-219
               

               
Cow position:
               
chr27:16103795-16103936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
5, 87
               

               
Conread position:
               
71-232
               

               
Cow position:
               
chr27:20247819-20247658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
82, 127
               

               
Conread position:
               
71-249
               

               
Cow position:
               
chr27:30872071-30871897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
71-260
               

               
Cow position:
               
chr27:6159970-6160155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
71-276
               

               
Cow position:
               
chr27:19589463-19589668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
71-276
               

               
Cow position:
               
chr27:20591969-20592173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 133
               

               
Conread position:
               
71-277
               

               
Cow position:
               
chr27:23455167-23454952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 206
               

               
Conread position:
               
71-277
               

               
Cow position:
               
chr27:28190226-28190027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
71-279
               

               
Cow position:
               
chr27:6523026-6523238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
71-279
               

               
Cow position:
               
chr27:30988784-30988992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
195, 86
               

               
Conread position:
               
71-281
               

               
Cow position:
               
chr27:29831710-29831493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
71-283
               

               
Cow position:
               
chr27:732558-732766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
71-283
               

               
Cow position:
               
chr27:6541617-6541820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr27:1498306-1498511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr27:6550445-6550648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr27:12516181-12516396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr27:18215040-18215253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr27:20354573-20354777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr27:22330683-22330473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
54, 91
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr27:24227806-24227596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr27:26218694-26218896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr27:27003286-27003084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr27:27020116-27019903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr27:30177588-30177377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
35, 88
               

               
Conread position:
               
71-307
               

               
Cow position:
               
chr27:24321174-24321407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
129, 88
               

               
Conread position:
               
71-308
               

               
Cow position:
               
chr27:12429392-12429628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
72-199
               

               
Cow position:
               
chr27:12191501-12191374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
121, 81
               

               
Conread position:
               
72-210
               

               
Cow position:
               
chr27:10395270-10395134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
76, 88
               

               
Conread position:
               
72-284
               

               
Cow position:
               
chr27:23882388-23882178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
72-285
               

               
Cow position:
               
chr27:8062363-8062161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
128, 22
               

               
Conread position:
               
72-296
               

               
Cow position:
               
chr27:27554694-27554478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
73-246
               

               
Cow position:
               
chr27:19668805-19668629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 115
               

               
Conread position:
               
74-285
               

               
Cow position:
               
chr27:4673010-4673218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
75-197
               

               
Cow position:
               
chr27:26226298-26226178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
75-199
               

               
Cow position:
               
chr27:30672572-30672449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
75-213
               

               
Cow position:
               
chr27:26141763-26141898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
75-227
               

               
Cow position:
               
chr27:20789384-20789239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
75-230
               

               
Cow position:
               
chr27:26481219-26481074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
75-259
               

               
Cow position:
               
chr27:20118397-20118573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
75-259
               

               
Cow position:
               
chr27:24357250-24357438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
75-269
               

               
Cow position:
               
chr27:27550750-27550565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
75-275
               

               
Cow position:
               
chr27:16871921-16871727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 84
               

               
Conread position:
               
75-275
               

               
Cow position:
               
chr27:26509168-26508969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
75-275
               

               
Cow position:
               
chr27:27064447-27064251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 28
               

               
Conread position:
               
75-275
               

               
Cow position:
               
chr27:31499055-31499256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
53, 135
               

               
Conread position:
               
75-276
               

               
Cow position:
               
chr27:23128448-23128644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 116
               

               
Conread position:
               
75-276
               

               
Cow position:
               
chr27:28921905-28921707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
75-276
               

               
Cow position:
               
chr27:29977244-29977448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
75-278
               

               
Cow position:
               
chr27:6058493-6058694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
75-279
               

               
Cow position:
               
chr27:8962264-8962077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
75-282
               

               
Cow position:
               
chr27:27684128-27683921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
122, 84
               

               
Conread position:
               
75-283
               

               
Cow position:
               
chr27:18434478-18434278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
75-285
               

               
Cow position:
               
chr27:28518287-28518482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
75-342
               

               
Cow position:
               
chr27:4812888-4812624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
127, 84
               

               
Conread position:
               
75-376
               

               
Cow position:
               
chr27:28038349-28038047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
124, 84
               

               
Conread position:
               
76-190
               

               
Cow position:
               
chr27:26087287-26087401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-272
               

               
Cow position:
               
chr27:8353467-8353662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
126, 50
               

               
Conread position:
               
76-274
               

               
Cow position:
               
chr27:27245360-27245164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 83
               

               
Conread position:
               
76-279
               

               
Cow position:
               
chr27:24331714-24331918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 115
               

               
Conread position:
               
76-285
               

               
Cow position:
               
chr27:1123024-1123219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
124, 83
               

               
Conread position:
               
76-285
               

               
Cow position:
               
chr27:27449440-27449237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
76-285
               

               
Cow position:
               
chr27:30844081-30843881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
146, 42
               

               
Conread position:
               
77-276
               

               
Cow position:
               
chr27:12596759-12596948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
77-276
               

               
Cow position:
               
chr27:14670394-14670191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 86
               

               
Conread position:
               
77-279
               

               
Cow position:
               
chr27:27136525-27136333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
77-283
               

               
Cow position:
               
chr27:11815764-11815564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
77-285
               

               
Cow position:
               
chr27:22723711-22723509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
77-291
               

               
Cow position:
               
chr27:18031071-18030856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
25, 191
               

               
Conread position:
               
77-301
               

               
Cow position:
               
chr27:21569849-21569629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
212, 90
               

               
Conread position:
               
77-309
               

               
Cow position:
               
chr27:23472250-23472481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
123, 41
               

               
Conread position:
               
77-321
               

               
Cow position:
               
chr27:16786820-16787061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
78-285
               

               
Cow position:
               
chr27:2957400-2957605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
116, 15
               

               
Conread position:
               
78-285
               

               
Cow position:
               
chr27:26807568-26807366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
78-285
               

               
Cow position:
               
chr27:29019757-29019549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
122, 47
               

               
Conread position:
               
78-304
               

               
Cow position:
               
chr27:22547413-22547187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
120, 81
               

               
Conread position:
               
79-285
               

               
Cow position:
               
chr27:4386065-4385868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
79-309
               

               
Cow position:
               
chr27:7935162-7934942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
79, 97
               

               
Conread position:
               
81-180
               

               
Cow position:
               
chr27:674047-673949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
81-279
               

               
Cow position:
               
chr27:20795791-20795976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
82-278
               

               
Cow position:
               
chr27:29283410-29283218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
82-283
               

               
Cow position:
               
chr27:8292006-8291816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
82-283
               

               
Cow position:
               
chr27:21978140-21977942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
69, 122
               

               
Conread position:
               
84-252
               

               
Cow position:
               
chr27:27438507-27438339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
84-267
               

               
Cow position:
               
chr27:11412720-11412901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
85-275
               

               
Cow position:
               
chr27:30407035-30406843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
97, 78
               

               
Conread position:
               
85-301
               

               
Cow position:
               
chr27:26428131-26427915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 72
               

               
Conread position:
               
86-272
               

               
Cow position:
               
chr27:19717927-19718109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
86-283
               

               
Cow position:
               
chr27:1903062-1903259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
86-284
               

               
Cow position:
               
chr27:22771754-22771954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
70, 195
               

               
Conread position:
               
86-285
               

               
Cow position:
               
chr27:6500061-6500262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
70, 195
               

               
Conread position:
               
86-285
               

               
Cow position:
               
chr27:21408558-21408355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
73, 197
               

               
Conread position:
               
86-285
               

               
Cow position:
               
chr27:24026977-24027169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
150, 88
               

               
Conread position:
               
90-276
               

               
Cow position:
               
chr27:16619995-16620181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
110, 74
               

               
Conread position:
               
90-285
               

               
Cow position:
               
chr27:4881610-4881805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
110, 67
               

               
Conread position:
               
92-241
               

               
Cow position:
               
chr27:13376020-13375877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
95-284
               

               
Cow position:
               
chr27:15871172-15871358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
61, 109
               

               
Conread position:
               
95-285
               

               
Cow position:
               
chr27:2930587-2930399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 109
               

               
Conread position:
               
97-285
               

               
Cow position:
               
chr27:15668756-15668570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
97-285
               

               
Cow position:
               
chr27:26424572-26424390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
144, 62
               

               
Conread position:
               
97-285
               

               
Cow position:
               
chr27:28164392-28164214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
97-309
               

               
Cow position:
               
chr27:18507656-18507853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
100-241
               

               
Cow position:
               
chr27:30483155-30483298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
102-276
               

               
Cow position:
               
chr27:26436862-26436684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
102-285
               

               
Cow position:
               
chr27:22179775-22179600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
102-285
               

               
Cow position:
               
chr27:30890306-30890484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
93, 57
               

               
Conread position:
               
103-284
               

               
Cow position:
               
chr27:26239047-26239220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
104-276
               

               
Cow position:
               
chr27:22426811-22426638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 101
               

               
Conread position:
               
105-309
               

               
Cow position:
               
chr27:21419047-21418843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
109-238
               

               
Cow position:
               
chr27:28009035-28008905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 97
               

               
Conread position:
               
109-284
               

               
Cow position:
               
chr27:2012078-2011907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
121-283
               

               
Cow position:
               
chr27:16263373-16263528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
121-285
               

               
Cow position:
               
chr27:28206832-28206995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
125-289
               

               
Cow position:
               
chr27:12278227-12278073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
161, 57
               

               
Conread position:
               
130-284
               

               
Cow position:
               
chr27:4835564-4835411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
72, 29
               
Show alignments to all cow chromosomes.