Cow genome map

Conread name: Ova1-OVRM10106C09

Conread position: 1-148
Cow position: chr5:50713712-50713854 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 1-177
Cow position: chr5:23678647-23678814 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 1-193
Cow position: chr5:49474493-49474668 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 105, 46

Conread position: 1-193
Cow position: chr5:60747224-60747402 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 1-199
Cow position: chr5:45273449-45273633 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 149, 49

Conread position: 1-199
Cow position: chr5:67540149-67540335 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 1-232
Cow position: chr5:16214739-16214524 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 1-234
Cow position: chr5:66972481-66972257 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 199, 43

Conread position: 1-241
Cow position: chr5:41452613-41452839 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 201, 54

Conread position: 1-243
Cow position: chr5:29979930-29980160 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 194, 64

Conread position: 1-245
Cow position: chr5:51935242-51935006 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 151, 49

Conread position: 1-246
Cow position: chr5:3668950-3668720 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 199, 46

Conread position: 1-250
Cow position: chr5:37808611-37808846 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 1-250
Cow position: chr5:55928996-55928761 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 49

Conread position: 1-250
Cow position: chr5:71723127-71722879 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 107, 53

Conread position: 1-258
Cow position: chr5:30178452-30178700 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 155, 53

Conread position: 1-266
Cow position: chr5:69731555-69731320 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 1-270
Cow position: chr5:9390605-9390334 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 119, 50

Conread position: 1-272
Cow position: chr5:47696389-47696654 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 186, 46

Conread position: 1-272
Cow position: chr5:64758715-64758967 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 1-272
Cow position: chr5:72903180-72903431 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 135, 49

Conread position: 1-275
Cow position: chr5:24175424-24175164 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 17

Conread position: 1-275
Cow position: chr5:42744838-42744587 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 54, 0

Conread position: 1-276
Cow position: chr5:3242425-3242681 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 1-276
Cow position: chr5:9089971-9090231 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 49

Conread position: 1-276
Cow position: chr5:11427181-11427449 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 163, 49

Conread position: 1-276
Cow position: chr5:11668133-11668386 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 104, 50

Conread position: 1-276
Cow position: chr5:32956042-32956299 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 0

Conread position: 1-276
Cow position: chr5:39695704-39695445 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 199, 56

Conread position: 1-278
Cow position: chr5:29828099-29827843 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 50

Conread position: 1-278
Cow position: chr5:52000275-52000009 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 49

Conread position: 1-279
Cow position: chr5:18090790-18090517 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 154

Conread position: 1-280
Cow position: chr5:458541-458269 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 147, 49

Conread position: 1-281
Cow position: chr5:31918695-31918442 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 1-283
Cow position: chr5:32140656-32140920 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-283
Cow position: chr5:36868789-36868532 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 1-283
Cow position: chr5:37646491-37646765 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 46

Conread position: 1-283
Cow position: chr5:49685219-49685494 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 53

Conread position: 1-284
Cow position: chr5:16893719-16893990 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 58

Conread position: 1-284
Cow position: chr5:27419677-27419936 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-284
Cow position: chr5:28230214-28229943 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 1-284
Cow position: chr5:62172464-62172204 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-285
Cow position: chr5:740887-741164 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 177, 65

Conread position: 1-285
Cow position: chr5:4031937-4032204 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 54

Conread position: 1-285
Cow position: chr5:5257236-5257512 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 52

Conread position: 1-285
Cow position: chr5:18574227-18573955 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 49

Conread position: 1-285
Cow position: chr5:20128104-20127839 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 186, 49

Conread position: 1-285
Cow position: chr5:34050170-34049894 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 155, 49

Conread position: 1-285
Cow position: chr5:34300971-34300710 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-285
Cow position: chr5:40356794-40357085 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 242

Conread position: 1-285
Cow position: chr5:41165140-41164873 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 209, 45

Conread position: 1-285
Cow position: chr5:46322747-46323027 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 12

Conread position: 1-285
Cow position: chr5:55068758-55068501 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 1-285
Cow position: chr5:56820209-56820475 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-285
Cow position: chr5:64137308-64137036 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 155, 56

Conread position: 1-285
Cow position: chr5:72564816-72564547 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-286
Cow position: chr5:55176949-55176671 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 67

Conread position: 1-307
Cow position: chr5:49361940-49362226 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 199, 37

Conread position: 1-307
Cow position: chr5:52645028-52645317 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 274, 47

Conread position: 1-308
Cow position: chr5:63987393-63987685 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 157, 49

Conread position: 1-309
Cow position: chr5:32696770-32697054 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 49

Conread position: 1-309
Cow position: chr5:34528603-34528322 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 179, 57

Conread position: 1-309
Cow position: chr5:43858367-43858667 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 109

Conread position: 1-309
Cow position: chr5:64523811-64524119 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 177, 49

Conread position: 1-376
Cow position: chr5:54350309-54350666 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 154, 49

Conread position: 2-232
Cow position: chr5:54060327-54060110 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 152, 11

Conread position: 2-234
Cow position: chr5:30949863-30950085 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 7, 56

Conread position: 2-279
Cow position: chr5:26262622-26262884 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 7, 46

Conread position: 2-283
Cow position: chr5:21964341-21964078 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 7, 49

Conread position: 2-285
Cow position: chr5:29903457-29903737 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 17, 59

Conread position: 2-285
Cow position: chr5:37646127-37645858 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 6, 56

Conread position: 2-285
Cow position: chr5:44993989-44994252 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 78, 48

Conread position: 3-276
Cow position: chr5:7140056-7140312 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 47

Conread position: 3-280
Cow position: chr5:40039718-40039982 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 4-285
Cow position: chr5:47888662-47888930 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 51

Conread position: 7-226
Cow position: chr5:44673743-44673526 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 51

Conread position: 7-261
Cow position: chr5:53842327-53842096 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 7-262
Cow position: chr5:22643180-22643411 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 80, 43

Conread position: 7-276
Cow position: chr5:16509146-16508888 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 44

Conread position: 7-276
Cow position: chr5:43992370-43992118 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 190, 47

Conread position: 7-285
Cow position: chr5:21944444-21944166 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 149, 43

Conread position: 7-285
Cow position: chr5:41545847-41546109 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 227, 38

Conread position: 8-191
Cow position: chr5:60448261-60448090 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 170, 42

Conread position: 8-202
Cow position: chr5:14473359-14473550 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 95, 58

Conread position: 8-211
Cow position: chr5:39875169-39874979 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 8-231
Cow position: chr5:21920426-21920205 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 144, 50

Conread position: 8-266
Cow position: chr5:24485389-24485623 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 8-279
Cow position: chr5:18899021-18898773 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 8-281
Cow position: chr5:28224498-28224242 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 42, 0

Conread position: 8-283
Cow position: chr5:65752905-65752643 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 42, 0

Conread position: 8-284
Cow position: chr5:54713686-54713952 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 142, 43

Conread position: 8-284
Cow position: chr5:62142721-62142456 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 52

Conread position: 8-285
Cow position: chr5:2309511-2309780 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 42

Conread position: 8-285
Cow position: chr5:3771893-3771631 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 148, 18

Conread position: 8-285
Cow position: chr5:8024148-8024407 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 8-285
Cow position: chr5:17063041-17063309 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 172, 26

Conread position: 8-285
Cow position: chr5:22242727-22243000 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 152, 49

Conread position: 8-285
Cow position: chr5:26377626-26377882 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 8-285
Cow position: chr5:32394644-32394384 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 144, 49

Conread position: 8-285
Cow position: chr5:39447490-39447747 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 180, 42

Conread position: 8-285
Cow position: chr5:42845548-42845815 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 131, 45

Conread position: 8-285
Cow position: chr5:50533339-50533599 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 8-285
Cow position: chr5:57935063-57935329 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 190, 40

Conread position: 8-285
Cow position: chr5:58793562-58793830 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 119, 40

Conread position: 8-309
Cow position: chr5:30487287-30487009 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 42

Conread position: 8-309
Cow position: chr5:34115698-34115423 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 58, 0

Conread position: 8-309
Cow position: chr5:35826647-35826351 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 186, 49

Conread position: 8-309
Cow position: chr5:53855745-53855465 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 153, 46

Conread position: 8-309
Cow position: chr5:58144556-58144845 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 39

Conread position: 8-309
Cow position: chr5:65941205-65941492 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 40

Conread position: 8-338
Cow position: chr5:54311381-54311068 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 47

Conread position: 8-403
Cow position: chr5:26595058-26595441 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 261
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 172, 49

Conread position: 9-199
Cow position: chr5:54767865-54768042 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 9-265
Cow position: chr5:46499342-46499102 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 9-280
Cow position: chr5:42064249-42063991 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 152, 42

Conread position: 9-281
Cow position: chr5:71494865-71494604 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 144, 41

Conread position: 9-283
Cow position: chr5:1766305-1766558 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 9-284
Cow position: chr5:13691523-13691790 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 147, 41

Conread position: 9-285
Cow position: chr5:29353081-29353344 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 185, 45

Conread position: 9-285
Cow position: chr5:55756374-55756657 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 52

Conread position: 10-234
Cow position: chr5:55955951-55955740 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 188, 47

Conread position: 10-267
Cow position: chr5:57575814-57575567 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 188, 38

Conread position: 10-268
Cow position: chr5:2500136-2500388 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 147, 48

Conread position: 10-276
Cow position: chr5:17028138-17027887 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 173, 40

Conread position: 10-285
Cow position: chr5:37713851-37714120 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 133, 40

Conread position: 10-285
Cow position: chr5:73080246-73079997 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 10-294
Cow position: chr5:29860394-29860093 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 150, 55

Conread position: 11-199
Cow position: chr5:56334729-56334546 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 143, 54

Conread position: 11-241
Cow position: chr5:59115428-59115208 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 120, 39

Conread position: 11-258
Cow position: chr5:20345204-20344967 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 148, 43

Conread position: 11-287
Cow position: chr5:34463536-34463802 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 214, 47

Conread position: 11-309
Cow position: chr5:65924647-65924938 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 120, 39

Conread position: 12-285
Cow position: chr5:28946018-28946274 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 121, 43

Conread position: 12-285
Cow position: chr5:52165136-52165397 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 38

Conread position: 12-309
Cow position: chr5:29681139-29680839 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 35, 77

Conread position: 13-253
Cow position: chr5:6670153-6670382 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 187, 28

Conread position: 13-327
Cow position: chr5:69461373-69461074 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 277, 43

Conread position: 15-309
Cow position: chr5:59443210-59443490 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 187, 43

Conread position: 17-285
Cow position: chr5:16206117-16206358 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 18-255
Cow position: chr5:17644619-17644842 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 18-267
Cow position: chr5:14904034-14904271 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 42

Conread position: 18-274
Cow position: chr5:8994530-8994771 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 19-270
Cow position: chr5:19079163-19078909 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 149
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 54, 22

Conread position: 19-285
Cow position: chr5:45225779-45226039 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-309
Cow position: chr5:43474879-43474608 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 20-284
Cow position: chr5:28927553-28927807 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 37

Conread position: 26-285
Cow position: chr5:34441761-34442007 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 168, 25

Conread position: 26-285
Cow position: chr5:56134937-56135184 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 27-284
Cow position: chr5:15426565-15426314 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 173, 47

Conread position: 28-285
Cow position: chr5:72150275-72150035 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 29-263
Cow position: chr5:53145859-53146080 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 169, 26

Conread position: 46-343
Cow position: chr5:58229725-58229431 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 34, 160

Conread position: 50-238
Cow position: chr5:40169171-40169356 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 58

Conread position: 50-258
Cow position: chr5:52040300-52040509 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 103, 129

Conread position: 50-282
Cow position: chr5:58460380-58460617 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 150, 234

Conread position: 50-285
Cow position: chr5:37065109-37064878 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 102

Conread position: 51-225
Cow position: chr5:44849715-44849879 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 25

Conread position: 52-260
Cow position: chr5:74610676-74610883 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 81

Conread position: 58-276
Cow position: chr5:40387865-40388073 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 103

Conread position: 59-285
Cow position: chr5:51357495-51357719 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 141, 24

Conread position: 60-276
Cow position: chr5:7044701-7044918 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 15, 100

Conread position: 60-285
Cow position: chr5:12709893-12709671 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 144

Conread position: 60-297
Cow position: chr5:35235705-35235936 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 60-307
Cow position: chr5:58929-59165 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 61-232
Cow position: chr5:62985530-62985353 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 91, 63

Conread position: 61-276
Cow position: chr5:29212948-29212741 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 33

Conread position: 61-276
Cow position: chr5:46122347-46122558 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 32

Conread position: 61-279
Cow position: chr5:63185252-63185464 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 139, 59

Conread position: 61-283
Cow position: chr5:23856159-23856375 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 92, 9

Conread position: 61-285
Cow position: chr5:21525174-21524949 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 95, 22

Conread position: 61-309
Cow position: chr5:31469579-31469822 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 95, 19

Conread position: 61-320
Cow position: chr5:32975549-32975801 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 62-193
Cow position: chr5:56680251-56680121 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 62-276
Cow position: chr5:50637830-50637622 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 72

Conread position: 62-276
Cow position: chr5:56433806-56433591 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 140, 9

Conread position: 63-285
Cow position: chr5:32963629-32963844 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 125, 53

Conread position: 66-284
Cow position: chr5:65932929-65933142 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 67-234
Cow position: chr5:24616118-24616288 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 89, 16

Conread position: 67-273
Cow position: chr5:35449244-35449049 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 67-276
Cow position: chr5:51151360-51151570 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 133, 32

Conread position: 67-284
Cow position: chr5:61576540-61576325 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 8

Conread position: 67-309
Cow position: chr5:45706043-45705808 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 89, 16

Conread position: 70-285
Cow position: chr5:50821777-50821573 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 89, 0

Conread position: 70-285
Cow position: chr5:75436892-75437112 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 83, 214

Conread position: 71-180
Cow position: chr5:13717573-13717684 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 71-193
Cow position: chr5:18289124-18289003 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 71-201
Cow position: chr5:73168007-73168132 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 71-212
Cow position: chr5:51800978-51801113 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 71-219
Cow position: chr5:35459302-35459445 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 71-229
Cow position: chr5:71579169-71579013 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 141, 86

Conread position: 71-233
Cow position: chr5:14629819-14629980 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 129, 86

Conread position: 71-251
Cow position: chr5:39242204-39242372 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 71-259
Cow position: chr5:4220978-4220790 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 124, 88

Conread position: 71-267
Cow position: chr5:75230672-75230485 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 71-268
Cow position: chr5:1027697-1027891 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 71-272
Cow position: chr5:359948-360150 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 71-272
Cow position: chr5:34976848-34977039 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 98

Conread position: 71-276
Cow position: chr5:44752323-44752518 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 71-276
Cow position: chr5:45037015-45036814 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 71-276
Cow position: chr5:65887013-65887222 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 79, 12

Conread position: 71-276
Cow position: chr5:72286918-72287119 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 81

Conread position: 71-279
Cow position: chr5:6839085-6839289 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 24

Conread position: 71-279
Cow position: chr5:15722073-15722264 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 71-280
Cow position: chr5:43395148-43395349 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 23, 0

Conread position: 71-281
Cow position: chr5:34184224-34184007 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 71-282
Cow position: chr5:26467617-26467408 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 129, 88

Conread position: 71-285
Cow position: chr5:5111081-5111292 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 129, 88

Conread position: 71-285
Cow position: chr5:14420349-14420560 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 92, 54

Conread position: 71-285
Cow position: chr5:16185081-16184874 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 71-285
Cow position: chr5:21039981-21040189 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 82, 23

Conread position: 71-285
Cow position: chr5:34885167-34885371 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 71-285
Cow position: chr5:41531088-41531304 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 133, 0

Conread position: 71-285
Cow position: chr5:42748151-42747943 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 107, 86

Conread position: 71-285
Cow position: chr5:62107497-62107710 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 129, 79

Conread position: 71-285
Cow position: chr5:72006860-72007068 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 71-300
Cow position: chr5:47547723-47547948 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 223, 79

Conread position: 71-308
Cow position: chr5:6086564-6086800 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 129, 81

Conread position: 71-309
Cow position: chr5:9894131-9894366 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 85

Conread position: 71-309
Cow position: chr5:42677225-42676995 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 66

Conread position: 71-309
Cow position: chr5:44583134-44583357 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 0

Conread position: 71-328
Cow position: chr5:1950069-1950318 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 218, 86

Conread position: 72-201
Cow position: chr5:43844801-43844929 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 17, 88

Conread position: 72-211
Cow position: chr5:19294496-19294628 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 72-250
Cow position: chr5:47323458-47323269 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 113

Conread position: 72-276
Cow position: chr5:30638869-30639060 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 161
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 72-283
Cow position: chr5:16025468-16025674 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 130, 38

Conread position: 72-285
Cow position: chr5:28324348-28324130 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 88

Conread position: 72-285
Cow position: chr5:50723041-50722835 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 72-285
Cow position: chr5:51490765-51490969 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 74-262
Cow position: chr5:74019780-74019964 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 75-193
Cow position: chr5:19335794-19335913 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 75-199
Cow position: chr5:7921410-7921532 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 75-239
Cow position: chr5:12866828-12866999 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 75-239
Cow position: chr5:30092633-30092800 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 75-243
Cow position: chr5:3639496-3639656 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 75-258
Cow position: chr5:48009858-48010036 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 85

Conread position: 75-275
Cow position: chr5:34288481-34288676 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 119, 84

Conread position: 75-276
Cow position: chr5:54404901-54405103 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 125, 109

Conread position: 75-276
Cow position: chr5:59325845-59326036 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 75-276
Cow position: chr5:61840182-61839981 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 132

Conread position: 75-279
Cow position: chr5:6130343-6130142 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 75-281
Cow position: chr5:42667400-42667601 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 86, 36

Conread position: 75-282
Cow position: chr5:57271275-57271478 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 126

Conread position: 75-283
Cow position: chr5:24349098-24348898 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 167
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 84, 0

Conread position: 75-283
Cow position: chr5:35145339-35145139 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 75-283
Cow position: chr5:44848030-44848230 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 90

Conread position: 75-284
Cow position: chr5:3627162-3627382 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 125, 82

Conread position: 75-285
Cow position: chr5:3492185-3491986 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 75-285
Cow position: chr5:14415763-14415558 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 116, 34

Conread position: 75-285
Cow position: chr5:21828856-21828649 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 75-285
Cow position: chr5:23140589-23140788 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 81, 27

Conread position: 75-285
Cow position: chr5:26990382-26990178 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 137, 84

Conread position: 75-285
Cow position: chr5:34638874-34638670 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 84, 0

Conread position: 75-285
Cow position: chr5:47871052-47871266 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 39, 208

Conread position: 75-285
Cow position: chr5:50950544-50950338 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 119, 84

Conread position: 75-285
Cow position: chr5:55145373-55145578 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 129, 61

Conread position: 75-285
Cow position: chr5:56070846-56070638 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 125, 84

Conread position: 75-285
Cow position: chr5:58856094-58855889 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 83

Conread position: 75-303
Cow position: chr5:44446878-44447124 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 130, 84

Conread position: 75-307
Cow position: chr5:47313465-47313236 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 11

Conread position: 75-308
Cow position: chr5:40109481-40109263 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 75-309
Cow position: chr5:21617446-21617216 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 128, 11

Conread position: 75-309
Cow position: chr5:41522812-41523032 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 75-309
Cow position: chr5:58519415-58519638 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 18

Conread position: 75-309
Cow position: chr5:62826764-62826992 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 78, 0

Conread position: 75-376
Cow position: chr5:30253731-30253439 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 212, 84

Conread position: 76-275
Cow position: chr5:72845791-72845979 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 76-276
Cow position: chr5:4710158-4710350 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 76-276
Cow position: chr5:7723654-7723464 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 76-283
Cow position: chr5:6503894-6504093 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 80, 44

Conread position: 76-283
Cow position: chr5:42777753-42777551 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 76-284
Cow position: chr5:60520151-60519952 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 167
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 83, 0

Conread position: 76-285
Cow position: chr5:30816708-30816500 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 124, 81

Conread position: 76-285
Cow position: chr5:64393147-64392939 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 83

Conread position: 76-312
Cow position: chr5:38833110-38832875 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 131, 36

Conread position: 77-200
Cow position: chr5:31020150-31020268 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 77-229
Cow position: chr5:66581953-66581803 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 77-269
Cow position: chr5:56518222-56518410 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 77-272
Cow position: chr5:54086531-54086332 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 77-276
Cow position: chr5:43737966-43738159 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 159
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 82, 0

Conread position: 77-283
Cow position: chr5:48829145-48828934 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 35

Conread position: 77-284
Cow position: chr5:11229681-11229888 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 123, 84

Conread position: 77-284
Cow position: chr5:27155012-27154808 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 19, 82

Conread position: 77-285
Cow position: chr5:17999504-17999711 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 82, 122

Conread position: 77-285
Cow position: chr5:36855193-36854997 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 80, 0

Conread position: 77-309
Cow position: chr5:14550593-14550825 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 124, 73

Conread position: 77-309
Cow position: chr5:20974456-20974683 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 77-309
Cow position: chr5:35763263-35763051 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 78-282
Cow position: chr5:57327784-57327576 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 120, 79

Conread position: 78-288
Cow position: chr5:47316984-47317186 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 72, 0

Conread position: 79-275
Cow position: chr5:26790469-26790658 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 79-276
Cow position: chr5:51053664-51053855 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 159
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 80-283
Cow position: chr5:56467685-56467487 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 104

Conread position: 81-234
Cow position: chr5:30629175-30629323 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 81-280
Cow position: chr5:57737088-57736904 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 81-285
Cow position: chr5:2288564-2288774 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 90, 76

Conread position: 81-288
Cow position: chr5:53835697-53835496 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 76, 0

Conread position: 81-307
Cow position: chr5:75244303-75244529 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 206, 76

Conread position: 82-232
Cow position: chr5:41486756-41486901 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 148, 118

Conread position: 82-283
Cow position: chr5:30276680-30276478 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 118, 77

Conread position: 82-284
Cow position: chr5:65776399-65776600 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 115, 75

Conread position: 82-284
Cow position: chr5:66815587-66815790 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 147

Conread position: 82-287
Cow position: chr5:71158278-71158481 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 64, 49

Conread position: 82-297
Cow position: chr5:28456421-28456639 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 75, 65

Conread position: 82-297
Cow position: chr5:28459722-28459941 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 65

Conread position: 82-307
Cow position: chr5:4506971-4507200 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 74, 199

Conread position: 84-226
Cow position: chr5:29097348-29097197 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 84-283
Cow position: chr5:3204818-3204622 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 121

Conread position: 84-309
Cow position: chr5:63388775-63388555 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 116, 58

Conread position: 85-263
Cow position: chr5:1678375-1678204 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 71, 102

Conread position: 85-276
Cow position: chr5:58005231-58005036 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 72, 51

Conread position: 85-283
Cow position: chr5:28926201-28926398 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 81, 181

Conread position: 86-211
Cow position: chr5:65883794-65883922 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 86-239
Cow position: chr5:61875205-61875348 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 86-272
Cow position: chr5:26370674-26370495 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 70, 36

Conread position: 86-276
Cow position: chr5:33414430-33414615 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 110

Conread position: 86-285
Cow position: chr5:28330354-28330547 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 115

Conread position: 86-285
Cow position: chr5:40889306-40889499 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 70, 36

Conread position: 86-285
Cow position: chr5:47704147-47704350 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 197

Conread position: 86-288
Cow position: chr5:5938304-5938106 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 90-279
Cow position: chr5:34709772-34709582 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 67

Conread position: 90-285
Cow position: chr5:61656580-61656391 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 41

Conread position: 93-246
Cow position: chr5:6286452-6286604 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 105, 66

Conread position: 94-309
Cow position: chr5:63840173-63840385 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 106, 63

Conread position: 95-225
Cow position: chr5:23866193-23866317 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 95-261
Cow position: chr5:50870516-50870349 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 106, 67

Conread position: 95-272
Cow position: chr5:3280901-3281076 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 173, 64

Conread position: 95-279
Cow position: chr5:37366871-37366687 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 104, 64

Conread position: 95-279
Cow position: chr5:44054065-44054248 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 105, 64

Conread position: 95-285
Cow position: chr5:16938037-16938223 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 108, 0

Conread position: 95-289
Cow position: chr5:32378823-32378650 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 96-283
Cow position: chr5:54064752-54064566 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 108

Conread position: 96-309
Cow position: chr5:63917441-63917649 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 0

Conread position: 97-243
Cow position: chr5:45025950-45026092 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 97-279
Cow position: chr5:69099500-69099319 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 103, 62

Conread position: 97-282
Cow position: chr5:8179151-8178966 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 60

Conread position: 97-309
Cow position: chr5:64139534-64139324 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 103, 56

Conread position: 98-309
Cow position: chr5:63964199-63964412 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 183

Conread position: 99-285
Cow position: chr5:46103974-46104151 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 99-311
Cow position: chr5:44049667-44049461 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 57, 105

Conread position: 101-246
Cow position: chr5:28957646-28957794 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 101-253
Cow position: chr5:46512799-46512951 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 58

Conread position: 101-285
Cow position: chr5:38853330-38853144 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 180

Conread position: 101-390
Cow position: chr5:12563042-12563326 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 134, 22

Conread position: 102-268
Cow position: chr5:50600019-50599858 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 57

Conread position: 102-309
Cow position: chr5:15598270-15598473 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 57, 0

Conread position: 103-233
Cow position: chr5:41392699-41392571 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 103-285
Cow position: chr5:12322839-12323016 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 104-275
Cow position: chr5:56443247-56443067 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 79

Conread position: 108-278
Cow position: chr5:65601420-65601251 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 48, 96

Conread position: 108-279
Cow position: chr5:15462672-15462504 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 96

Conread position: 108-309
Cow position: chr5:50729457-50729256 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 171

Conread position: 109-283
Cow position: chr5:24642770-24642935 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 114-274
Cow position: chr5:54875728-54875886 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 92

Conread position: 115-248
Cow position: chr5:23914043-23913907 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 116-273
Cow position: chr5:24836997-24837150 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 116-283
Cow position: chr5:25935902-25935737 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 44

Conread position: 121-276
Cow position: chr5:2851262-2851106 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 79, 21

Conread position: 139-285
Cow position: chr5:36479611-36479756 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 128

Show alignments to all cow chromosomes.