Cow genome map

Conread name: Ova1-OVRM10106F05

Conread position: 1-169
Cow position: chr1:79884818-79884989 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 166

Conread position: 1-171
Cow position: chr1:37419740-37419909 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 94, 126

Conread position: 1-240
Cow position: chr1:82407332-82407579 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 1-350
Cow position: chr1:54365812-54366161 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 103, 61

Conread position: 1-364
Cow position: chr1:88635383-88635015 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 245

Conread position: 1-365
Cow position: chr1:38414812-38414448 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 150

Conread position: 1-372
Cow position: chr1:40953711-40953340 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 12

Conread position: 1-372
Cow position: chr1:42290405-42290033 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 302

Conread position: 1-372
Cow position: chr1:69536914-69536532 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-375
Cow position: chr1:45097714-45097350 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 96

Conread position: 1-383
Cow position: chr1:52233100-52233479 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 130

Conread position: 1-390
Cow position: chr1:28801407-28801815 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 1-400
Cow position: chr1:40308078-40307677 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 262

Conread position: 1-405
Cow position: chr1:59933560-59933143 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 276
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 98, 13

Conread position: 1-470
Cow position: chr1:30027529-30027993 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 261

Conread position: 1-610
Cow position: chr1:13645739-13645137 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 101

Conread position: 1-612
Cow position: chr1:18244368-18244992 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 330

Conread position: 1-613
Cow position: chr1:87244805-87244200 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 379

Conread position: 1-613
Cow position: chr1:89740233-89740847 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 61

Conread position: 1-616
Cow position: chr1:40513489-40514102 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 69

Conread position: 1-618
Cow position: chr1:82918650-82919254 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 125

Conread position: 1-626
Cow position: chr1:101149844-101149234 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 118

Conread position: 1-627
Cow position: chr1:34689353-34688734 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 203

Conread position: 1-635
Cow position: chr1:33712075-33711438 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 191

Conread position: 1-697
Cow position: chr1:86609206-86608512 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 240

Conread position: 1-702
Cow position: chr1:5318769-5318077 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 450
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 75, 26

Conread position: 1-708
Cow position: chr1:25887146-25887834 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 53

Conread position: 2-235
Cow position: chr1:72136650-72136410 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 96, 230

Conread position: 2-322
Cow position: chr1:13880146-13879816 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 210
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 77, 252

Conread position: 2-372
Cow position: chr1:89899691-89900072 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 218

Conread position: 2-571
Cow position: chr1:1461317-1461890 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 384

Conread position: 3-152
Cow position: chr1:48245821-48245668 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 72, 115

Conread position: 3-163
Cow position: chr1:15347575-15347739 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 3-172
Cow position: chr1:12062187-12062358 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 72, 153

Conread position: 3-194
Cow position: chr1:28710926-28710723 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 3-215
Cow position: chr1:72080782-72080558 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 72, 0

Conread position: 3-249
Cow position: chr1:22863908-22864166 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 3-263
Cow position: chr1:102549240-102548973 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 72, 214

Conread position: 3-264
Cow position: chr1:78289891-78289618 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 166
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 3-270
Cow position: chr1:52359266-52359547 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 73, 270

Conread position: 3-323
Cow position: chr1:56144328-56144652 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 100

Conread position: 3-342
Cow position: chr1:33895689-33895337 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-360
Cow position: chr1:59674494-59674130 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 56

Conread position: 3-372
Cow position: chr1:89809612-89809997 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 150

Conread position: 3-372
Cow position: chr1:101857974-101858351 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 204

Conread position: 3-377
Cow position: chr1:89770673-89771052 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 190

Conread position: 3-385
Cow position: chr1:8554338-8553944 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-386
Cow position: chr1:69766472-69766087 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 206

Conread position: 3-390
Cow position: chr1:72656991-72656594 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 129

Conread position: 3-405
Cow position: chr1:68607534-68607952 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 3-441
Cow position: chr1:56489850-56489403 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 270

Conread position: 3-446
Cow position: chr1:6708084-6708539 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 358

Conread position: 3-446
Cow position: chr1:21087423-21086961 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 202

Conread position: 3-446
Cow position: chr1:33851288-33850811 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 56

Conread position: 3-446
Cow position: chr1:40684681-40685134 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 63

Conread position: 3-446
Cow position: chr1:55276476-55276928 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 271

Conread position: 3-446
Cow position: chr1:56163336-56162882 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 230

Conread position: 3-446
Cow position: chr1:59210129-59210583 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 138

Conread position: 3-446
Cow position: chr1:71562568-71563016 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 267

Conread position: 3-446
Cow position: chr1:79920717-79921176 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-446
Cow position: chr1:85791697-85791249 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 203

Conread position: 3-446
Cow position: chr1:86548124-86548571 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 253

Conread position: 3-447
Cow position: chr1:11292094-11292554 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-447
Cow position: chr1:89425597-89425140 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 140

Conread position: 3-447
Cow position: chr1:91718625-91719088 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 51

Conread position: 3-454
Cow position: chr1:57656556-57656102 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 30

Conread position: 3-463
Cow position: chr1:56723165-56722666 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 333
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 67, 0

Conread position: 3-484
Cow position: chr1:102556085-102555615 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 12

Conread position: 3-507
Cow position: chr1:28873087-28872579 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 439

Conread position: 3-534
Cow position: chr1:86699208-86699745 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 441

Conread position: 3-597
Cow position: chr1:63605772-63606376 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 444

Conread position: 3-603
Cow position: chr1:5501985-5501379 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 361

Conread position: 3-603
Cow position: chr1:25550073-25549465 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 443

Conread position: 3-603
Cow position: chr1:33550928-33550323 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 94

Conread position: 3-603
Cow position: chr1:42736466-42735858 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 59

Conread position: 3-603
Cow position: chr1:62244638-62245249 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 223

Conread position: 3-603
Cow position: chr1:62805796-62806402 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 266

Conread position: 3-603
Cow position: chr1:69403002-69402394 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 116

Conread position: 3-603
Cow position: chr1:72186863-72187471 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 443

Conread position: 3-603
Cow position: chr1:72981277-72980683 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 233

Conread position: 3-603
Cow position: chr1:76752644-76753248 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 44

Conread position: 3-603
Cow position: chr1:79335795-79336394 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 355

Conread position: 3-603
Cow position: chr1:79456958-79457566 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 115

Conread position: 3-603
Cow position: chr1:85780768-85781374 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 116

Conread position: 3-603
Cow position: chr1:100597372-100597980 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 439

Conread position: 3-604
Cow position: chr1:69922456-69923063 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 44

Conread position: 3-605
Cow position: chr1:93854530-93853919 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 395

Conread position: 3-611
Cow position: chr1:55776163-55775552 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 392

Conread position: 3-611
Cow position: chr1:82564513-82563875 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 93

Conread position: 3-611
Cow position: chr1:91899008-91898372 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 140

Conread position: 3-613
Cow position: chr1:3385997-3386610 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 438

Conread position: 3-613
Cow position: chr1:17012728-17013370 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 26

Conread position: 3-613
Cow position: chr1:17036548-17037183 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 271

Conread position: 3-613
Cow position: chr1:18880383-18881025 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 346

Conread position: 3-613
Cow position: chr1:20828899-20828272 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 270

Conread position: 3-613
Cow position: chr1:21999946-22000562 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 389

Conread position: 3-613
Cow position: chr1:39543781-39543134 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-613
Cow position: chr1:57567960-57567348 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 439

Conread position: 3-613
Cow position: chr1:61309012-61308374 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 271

Conread position: 3-613
Cow position: chr1:62925623-62924990 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 614

Conread position: 3-613
Cow position: chr1:79636920-79637553 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 528

Conread position: 3-621
Cow position: chr1:58335846-58335225 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 270

Conread position: 3-626
Cow position: chr1:8825060-8824445 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 55

Conread position: 3-626
Cow position: chr1:62853834-62854433 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 152

Conread position: 3-629
Cow position: chr1:49974181-49974810 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 124

Conread position: 3-629
Cow position: chr1:76622948-76623569 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 79

Conread position: 3-630
Cow position: chr1:67835129-67835779 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 267

Conread position: 3-631
Cow position: chr1:13253428-13254055 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 190

Conread position: 3-631
Cow position: chr1:25180021-25180657 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 439

Conread position: 3-669
Cow position: chr1:18014180-18014852 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 409
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 276

Conread position: 4-412
Cow position: chr1:31366068-31366489 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 4-599
Cow position: chr1:17941802-17942420 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 4-604
Cow position: chr1:57367124-57367732 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 113

Conread position: 5-413
Cow position: chr1:38387643-38388035 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 277
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 159, 24

Conread position: 5-615
Cow position: chr1:97226698-97227317 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 92

Conread position: 5-629
Cow position: chr1:56193924-56194555 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 135

Conread position: 5-667
Cow position: chr1:98661289-98661934 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 431
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 69, 11

Conread position: 8-395
Cow position: chr1:18406188-18406591 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 51

Conread position: 8-629
Cow position: chr1:76545538-76546162 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 348

Conread position: 8-708
Cow position: chr1:76703374-76704048 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 234

Conread position: 9-446
Cow position: chr1:40053358-40052910 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 5

Conread position: 10-603
Cow position: chr1:88130760-88130162 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 14

Conread position: 12-603
Cow position: chr1:85881744-85881151 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 222

Conread position: 18-372
Cow position: chr1:97123826-97123462 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 20

Conread position: 19-446
Cow position: chr1:80359176-80359614 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 128

Conread position: 29-383
Cow position: chr1:28276620-28276267 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 231
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 10

Conread position: 29-613
Cow position: chr1:55323539-55324133 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 10

Conread position: 31-352
Cow position: chr1:87207435-87207774 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 43-446
Cow position: chr1:43020093-43019683 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 74

Conread position: 44-231
Cow position: chr1:61733223-61733032 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 93

Conread position: 46-367
Cow position: chr1:52918653-52918973 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 220
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 92

Conread position: 46-431
Cow position: chr1:84149373-84148983 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 260
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 49

Conread position: 46-534
Cow position: chr1:102435060-102435553 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 397

Conread position: 48-613
Cow position: chr1:31396378-31395789 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 222

Conread position: 49-599
Cow position: chr1:77163743-77163198 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 351
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 24, 208

Conread position: 49-613
Cow position: chr1:82652600-82652005 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 77

Conread position: 58-405
Cow position: chr1:87969303-87968946 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 226
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 172

Conread position: 59-288
Cow position: chr1:99349069-99349307 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 16

Conread position: 72-239
Cow position: chr1:89478975-89478808 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 93

Conread position: 72-608
Cow position: chr1:67286428-67285902 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 47

Conread position: 79-446
Cow position: chr1:87449885-87449504 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 83-708
Cow position: chr1:69287636-69288249 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 405
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 82, 39

Conread position: 94-613
Cow position: chr1:73071113-73071637 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 15

Conread position: 97-293
Cow position: chr1:29361920-29361716 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 47

Conread position: 97-446
Cow position: chr1:53198705-53198343 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 47

Conread position: 97-644
Cow position: chr1:30058453-30057915 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 349
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 7, 66

Conread position: 113-446
Cow position: chr1:30023295-30023640 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 41, 0

Conread position: 113-702
Cow position: chr1:67902526-67903123 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 139

Conread position: 113-708
Cow position: chr1:42176504-42177067 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 122-382
Cow position: chr1:28722679-28722411 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 127-463
Cow position: chr1:52172589-52172937 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 103

Conread position: 127-529
Cow position: chr1:72120034-72119640 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 283
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 37, 65

Conread position: 135-703
Cow position: chr1:58179900-58180444 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 40

Conread position: 139-423
Cow position: chr1:8330157-8330436 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 87

Conread position: 142-611
Cow position: chr1:63501321-63500852 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 309
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 102

Conread position: 142-712
Cow position: chr1:28568492-28569044 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 364
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 124, 58

Conread position: 144-602
Cow position: chr1:58201745-58202203 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 298
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 23

Conread position: 157-611
Cow position: chr1:32342200-32342638 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 299
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 39, 46

Conread position: 158-463
Cow position: chr1:58224138-58223835 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 209, 104

Conread position: 159-446
Cow position: chr1:8027300-8027591 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 99, 9

Conread position: 160-446
Cow position: chr1:88759408-88759117 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 194, 0

Conread position: 160-446
Cow position: chr1:99995252-99995542 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 179, 190

Conread position: 161-574
Cow position: chr1:37420134-37420544 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 44

Conread position: 168-446
Cow position: chr1:13450024-13449742 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 101, 97

Conread position: 171-631
Cow position: chr1:23050477-23050019 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 199

Conread position: 184-446
Cow position: chr1:97560534-97560270 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 210, 126

Conread position: 201-442
Cow position: chr1:30283803-30284037 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 193, 60

Conread position: 207-603
Cow position: chr1:7144912-7145305 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 264
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 197

Conread position: 207-666
Cow position: chr1:101760972-101760513 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 294
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 42

Conread position: 208-599
Cow position: chr1:11863469-11863873 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 275
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 54, 209

Conread position: 214-603
Cow position: chr1:72080265-72079883 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 192

Conread position: 215-709
Cow position: chr1:72135223-72134730 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 43

Conread position: 228-603
Cow position: chr1:94659650-94659278 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 259
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 296, 200

Conread position: 238-412
Cow position: chr1:102548971-102548796 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 91

Conread position: 241-603
Cow position: chr1:3934393-3934743 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 267, 166

Conread position: 241-629
Cow position: chr1:20397172-20396797 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 256
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 26

Conread position: 244-613
Cow position: chr1:37455470-37455106 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 249
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 292, 143

Conread position: 245-708
Cow position: chr1:61732817-61732359 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 17

Conread position: 247-599
Cow position: chr1:79108863-79108519 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 229
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 293, 150

Conread position: 255-708
Cow position: chr1:82346289-82346740 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 308
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 278, 167

Conread position: 275-460
Cow position: chr1:9382518-9382707 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 141, 74

Conread position: 280-611
Cow position: chr1:53046220-53046548 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 256, 111

Conread position: 284-613
Cow position: chr1:40907845-40907514 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 230
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 249, 225

Conread position: 297-611
Cow position: chr1:82354141-82353834 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 210
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 170, 117

Conread position: 348-708
Cow position: chr1:82408245-82408611 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 237, 75

Conread position: 388-621
Cow position: chr1:53364320-53364084 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 32, 83

Conread position: 407-709
Cow position: chr1:89478790-89478487 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 26

Conread position: 409-701
Cow position: chr1:69060036-69059743 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 127, 102

Conread position: 421-626
Cow position: chr1:45097193-45096983 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 86, 94

Conread position: 421-712
Cow position: chr1:52323488-52323193 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 147

Conread position: 457-610
Cow position: chr1:52233524-52233682 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 58

Conread position: 457-613
Cow position: chr1:28722374-28722213 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 58

Conread position: 516-708
Cow position: chr1:31594452-31594257 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 20, 55

Conread position: 541-702
Cow position: chr1:72119384-72119221 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 136
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 74, 0

Show alignments to all cow chromosomes.