Cow genome map


           Conread name:
           Ova1-OVRM10106F05
        

               Conread position:
               1-352
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 66
               

               Conread position:
               1-371
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 58
               

               Conread position:
               1-395
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               256
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               72, 190
               

               Conread position:
               1-403
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 297
               

               Conread position:
               1-406
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 253
               

               Conread position:
               1-561
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               379
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               70, 217
               

               Conread position:
               1-572
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 271
               

               Conread position:
               1-585
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               385
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               1-585
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 102
               

               Conread position:
               1-618
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 249
               

               Conread position:
               1-618
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 388
               

               Conread position:
               1-626
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 268
               

               Conread position:
               1-632
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 12
               

               Conread position:
               1-632
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 12
               

               Conread position:
               1-638
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 154
               

               Conread position:
               1-649
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 34
               

               Conread position:
               1-668
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               438
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               75, 87
               

               Conread position:
               1-708
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 61
               

               Conread position:
               1-710
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 111
               

               Conread position:
               2-151
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               2-651
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               404
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               147, 13
               

               Conread position:
               3-191
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-381
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 115
               

               Conread position:
               3-382
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 204
               

               Conread position:
               3-394
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 270
               

               Conread position:
               3-415
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               69, 295
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 256
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 245
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 342
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               302
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               73, 256
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 140
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 320
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 201
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 45
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 151
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 233
               

               Conread position:
               3-467
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 123
               

               Conread position:
               3-491
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 279
               

               Conread position:
               3-534
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 452
               

               Conread position:
               3-534
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 94
               

               Conread position:
               3-538
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 107
               

               Conread position:
               3-597
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 100
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 116
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 82
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 325
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 258
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 464
               

               Conread position:
               3-609
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 362
               

               Conread position:
               3-609
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 443
               

               Conread position:
               3-611
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 317
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 233
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 233
               

               Conread position:
               3-622
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 215
               

               Conread position:
               3-629
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 229
               

               Conread position:
               3-637
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 233
               

               Conread position:
               4-171
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               4-613
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 404
               

               Conread position:
               5-364
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               252
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               91, 62
               

               Conread position:
               5-612
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               7-254
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               65, 198
               

               Conread position:
               10-439
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               16-609
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 367
               

               Conread position:
               44-613
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 96
               

               Conread position:
               48-613
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 383
               

               Conread position:
               50-375
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               95, 12
               

               Conread position:
               97-599
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               128-301
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               36, 169
               

               Conread position:
               142-706
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 111
               

               Conread position:
               157-606
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               300
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               78, 19
               

               Conread position:
               157-708
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               163-405
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               65, 61
               

               Conread position:
               167-405
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               168-446
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               219, 0
               

               Conread position:
               209-412
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               209-613
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               324, 26
               

               Conread position:
               212-694
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               324, 36
               

               Conread position:
               215-584
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               292, 52
               

               Conread position:
               240-626
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               243-390
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               129, 135
               

               Conread position:
               243-405
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               244-668
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               237, 71
               

               Conread position:
               251-611
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               108, 135
               

               Conread position:
               280-603
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               256, 57
               

               Conread position:
               350-647
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 307
               

               Conread position:
               361-611
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 46
               

               Conread position:
               374-613
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 127
               

               Conread position:
               433-708
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               496-693
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               40, 10
               

               Conread position:
               496-700
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               20, 14
               
Show alignments to all cow chromosomes.