Cow genome map

Conread name: Ova1-OVRM10106F05

Conread position: 1-352
Cow position: chr10:42628696-42628348 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 66

Conread position: 1-371
Cow position: chr10:10478113-10478476 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 58

Conread position: 1-395
Cow position: chr10:24978096-24978504 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 256
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 72, 190

Conread position: 1-403
Cow position: chr10:29632827-29633238 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 297

Conread position: 1-406
Cow position: chr10:276629-276216 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 253

Conread position: 1-561
Cow position: chr10:41351718-41352288 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 379
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 70, 217

Conread position: 1-572
Cow position: chr10:14860011-14859445 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 271

Conread position: 1-585
Cow position: chr10:42109763-42109180 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 385
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 73, 49

Conread position: 1-585
Cow position: chr10:42748133-42747550 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 102

Conread position: 1-618
Cow position: chr10:25498387-25497774 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 249

Conread position: 1-618
Cow position: chr10:62778382-62777766 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 388

Conread position: 1-626
Cow position: chr10:62216642-62216016 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 268

Conread position: 1-632
Cow position: chr10:29696271-29695641 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 12

Conread position: 1-632
Cow position: chr10:34685928-34685303 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 12

Conread position: 1-638
Cow position: chr10:4499724-4499098 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 154

Conread position: 1-649
Cow position: chr10:46191401-46190770 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 34

Conread position: 1-668
Cow position: chr10:32064181-32063506 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 438
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 75, 87

Conread position: 1-708
Cow position: chr10:24298819-24299533 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 61

Conread position: 1-710
Cow position: chr10:60489695-60488975 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 111

Conread position: 2-151
Cow position: chr10:39853980-39854133 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 2-651
Cow position: chr10:21901173-21901799 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 404
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 147, 13

Conread position: 3-191
Cow position: chr10:65308157-65307957 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 3-222
Cow position: chr10:13365817-13366050 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 3-381
Cow position: chr10:25359432-25359045 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 115

Conread position: 3-382
Cow position: chr10:54059321-54059704 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 204

Conread position: 3-394
Cow position: chr10:25565212-25565608 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 270

Conread position: 3-415
Cow position: chr10:28116393-28116824 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 279
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 69, 295

Conread position: 3-446
Cow position: chr10:11685634-11686080 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 256

Conread position: 3-446
Cow position: chr10:21400638-21401090 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 245

Conread position: 3-446
Cow position: chr10:21740718-21741174 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 342

Conread position: 3-446
Cow position: chr10:32578336-32577876 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 3-446
Cow position: chr10:39179817-39179368 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 302
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 73, 256

Conread position: 3-446
Cow position: chr10:41157481-41157031 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 140

Conread position: 3-446
Cow position: chr10:47906811-47906357 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 320

Conread position: 3-446
Cow position: chr10:57559515-57559972 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 201

Conread position: 3-463
Cow position: chr10:280587-281062 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 3-463
Cow position: chr10:4192184-4192655 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-463
Cow position: chr10:41567140-41566670 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 151

Conread position: 3-463
Cow position: chr10:41876952-41876481 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 233

Conread position: 3-467
Cow position: chr10:39817317-39817791 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 123

Conread position: 3-491
Cow position: chr10:14803869-14803366 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 279

Conread position: 3-534
Cow position: chr10:8290016-8289468 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 452

Conread position: 3-534
Cow position: chr10:62408822-62409352 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 94

Conread position: 3-538
Cow position: chr10:7282652-7283185 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 107

Conread position: 3-597
Cow position: chr10:37060957-37060361 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 100

Conread position: 3-603
Cow position: chr10:19143305-19143914 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 116

Conread position: 3-603
Cow position: chr10:21486947-21486343 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 21

Conread position: 3-603
Cow position: chr10:22101265-22100668 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 82

Conread position: 3-603
Cow position: chr10:29846576-29847192 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 325

Conread position: 3-603
Cow position: chr10:32650766-32650165 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 258

Conread position: 3-603
Cow position: chr10:38345329-38345947 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 464

Conread position: 3-609
Cow position: chr10:1375568-1374959 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 362

Conread position: 3-609
Cow position: chr10:39041267-39041886 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 443

Conread position: 3-611
Cow position: chr10:38546191-38546811 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 317

Conread position: 3-613
Cow position: chr10:19840186-19839557 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 233

Conread position: 3-613
Cow position: chr10:37769856-37769238 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 233

Conread position: 3-622
Cow position: chr10:19511639-19511017 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 215

Conread position: 3-629
Cow position: chr10:38538464-38539091 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 229

Conread position: 3-637
Cow position: chr10:124343-123721 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 233

Conread position: 4-171
Cow position: chr10:39904960-39904787 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 4-613
Cow position: chr10:57989931-57990541 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 404

Conread position: 5-364
Cow position: chr10:8328293-8328631 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 91, 62

Conread position: 5-612
Cow position: chr10:31523856-31523280 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 7-254
Cow position: chr10:20383515-20383768 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 65, 198

Conread position: 10-439
Cow position: chr10:51952579-51953020 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 16-609
Cow position: chr10:10581693-10581075 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 367

Conread position: 44-613
Cow position: chr10:61297319-61296712 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 96

Conread position: 48-613
Cow position: chr10:55093099-55092497 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 383

Conread position: 50-375
Cow position: chr10:58596484-58596156 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 215
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 12

Conread position: 97-599
Cow position: chr10:34318334-34318821 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 13

Conread position: 128-301
Cow position: chr10:50018155-50018333 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 169

Conread position: 142-706
Cow position: chr10:49310419-49309867 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 111

Conread position: 157-606
Cow position: chr10:21382582-21382134 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 300
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 19

Conread position: 157-708
Cow position: chr10:14885982-14886519 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 43

Conread position: 163-405
Cow position: chr10:15862436-15862670 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 61

Conread position: 167-405
Cow position: chr10:19715188-19715424 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 168-446
Cow position: chr10:21467112-21466830 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 219, 0

Conread position: 209-412
Cow position: chr10:58377748-58377947 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 17

Conread position: 209-613
Cow position: chr10:54127275-54126878 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 26

Conread position: 212-694
Cow position: chr10:14951526-14951061 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 36

Conread position: 215-584
Cow position: chr10:183353-182989 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 237
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 292, 52

Conread position: 240-626
Cow position: chr10:2421983-2422372 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 264
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 23

Conread position: 243-390
Cow position: chr10:1938059-1938206 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 135

Conread position: 243-405
Cow position: chr10:2123329-2123491 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 244-668
Cow position: chr10:38526512-38526090 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 271
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 237, 71

Conread position: 251-611
Cow position: chr10:42736281-42735935 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 242
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 135

Conread position: 280-603
Cow position: chr10:37040832-37040514 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 256, 57

Conread position: 350-647
Cow position: chr10:42628158-42627845 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 307

Conread position: 361-611
Cow position: chr10:29633162-29633410 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 46

Conread position: 374-613
Cow position: chr10:41144662-41144898 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 127

Conread position: 433-708
Cow position: chr10:15862673-15862944 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 73, 17

Conread position: 496-693
Cow position: chr10:42663827-42663629 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 10

Conread position: 496-700
Cow position: chr10:42683019-42682813 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 14

Show alignments to all cow chromosomes.