Cow genome map
Conread name: | Ova1-OVRM10106F05 |
Conread position: | 1-267 |
Cow position: | chr12:45261578-45261289 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 213 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 42, 238 |
Conread position: | 1-363 |
Cow position: | chr12:48405004-48404637 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 267 |
Conread position: | 1-372 |
Cow position: | chr12:8311146-8310762 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 1-372 |
Cow position: | chr12:21901900-21901531 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 75 |
Conread position: | 1-375 |
Cow position: | chr12:2759-2373 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 1-390 |
Cow position: | chr12:21941745-21941339 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 240 |
Conread position: | 1-405 |
Cow position: | chr12:22026712-22026304 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 265 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 73, 279 |
Conread position: | 1-480 |
Cow position: | chr12:15951304-15951780 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 66 |
Conread position: | 1-605 |
Cow position: | chr12:42859857-42860466 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 1-623 |
Cow position: | chr12:22332580-22331952 (view UCSC Genome Browser custom track) |
Alignm length: | 650 |
Alignm identity: | 450 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 186 |
Conread position: | 3-171 |
Cow position: | chr12:26947021-26947195 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 130 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 3-443 |
Cow position: | chr12:21207653-21207200 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 202 |
Conread position: | 3-446 |
Cow position: | chr12:21254697-21255149 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 233 |
Conread position: | 3-446 |
Cow position: | chr12:21426651-21426205 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 10 |
Conread position: | 3-446 |
Cow position: | chr12:26141772-26141313 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 285 |
Conread position: | 3-446 |
Cow position: | chr12:32653503-32653047 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 3-463 |
Cow position: | chr12:37558513-37558042 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 143 |
Conread position: | 3-505 |
Cow position: | chr12:25101103-25101611 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 298 |
Conread position: | 3-538 |
Cow position: | chr12:8678164-8678698 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 435 |
Conread position: | 3-597 |
Cow position: | chr12:11098200-11097598 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 119 |
Conread position: | 3-602 |
Cow position: | chr12:1402449-1401844 (view UCSC Genome Browser custom track) |
Alignm length: | 615 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 434 |
Conread position: | 3-603 |
Cow position: | chr12:6406690-6407292 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 38 |
Conread position: | 3-603 |
Cow position: | chr12:27932987-27933593 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 393 |
Conread position: | 3-608 |
Cow position: | chr12:22205788-22206395 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 391 |
Conread position: | 3-613 |
Cow position: | chr12:20998163-20998787 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 340 |
Conread position: | 3-649 |
Cow position: | chr12:1868419-1867775 (view UCSC Genome Browser custom track) |
Alignm length: | 665 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 23 |
Conread position: | 3-669 |
Cow position: | chr12:21500076-21499405 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 21 |
Conread position: | 4-335 |
Cow position: | chr12:28766063-28766401 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 89 |
Conread position: | 4-362 |
Cow position: | chr12:14662654-14663022 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 144 |
Conread position: | 4-447 |
Cow position: | chr12:3360861-3360412 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 180 |
Conread position: | 4-613 |
Cow position: | chr12:2282504-2281878 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 246 |
Conread position: | 5-603 |
Cow position: | chr12:252100-252707 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 48 |
Conread position: | 7-447 |
Cow position: | chr12:43031429-43031875 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 302 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 75, 265 |
Conread position: | 16-613 |
Cow position: | chr12:21197772-21197166 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 427 |
Conread position: | 78-249 |
Cow position: | chr12:601173-601350 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 132 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 87, 17 |
Conread position: | 99-708 |
Cow position: | chr12:2839737-2840342 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 11 |
Conread position: | 122-677 |
Cow position: | chr12:3631013-3630479 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 361 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 41, 115 |
Conread position: | 164-613 |
Cow position: | chr12:26947469-26947905 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 299 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 172, 37 |
Conread position: | 167-323 |
Cow position: | chr12:42420627-42420783 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 197-446 |
Cow position: | chr12:21883779-21883524 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 178 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 142, 50 |
Conread position: | 314-534 |
Cow position: | chr12:9708823-9709051 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 173 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 321-613 |
Cow position: | chr12:22121355-22121063 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 216 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 99, 48 |
Conread position: | 356-614 |
Cow position: | chr12:21058374-21058637 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 165 |
Conread position: | 360-708 |
Cow position: | chr12:48404363-48404020 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 32 |
Conread position: | 371-613 |
Cow position: | chr12:32183125-32182885 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 168 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 136, 144 |
Conread position: | 372-613 |
Cow position: | chr12:45261238-45260993 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 167 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 135, 143 |
Show alignments to all cow chromosomes.