Cow genome map

Conread name: Ova1-OVRM10106F05

Conread position: 1-267
Cow position: chr12:45261578-45261289 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 238

Conread position: 1-363
Cow position: chr12:48405004-48404637 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 267

Conread position: 1-372
Cow position: chr12:8311146-8310762 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 1-372
Cow position: chr12:21901900-21901531 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 75

Conread position: 1-375
Cow position: chr12:2759-2373 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 1-390
Cow position: chr12:21941745-21941339 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 240

Conread position: 1-405
Cow position: chr12:22026712-22026304 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 265
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 73, 279

Conread position: 1-480
Cow position: chr12:15951304-15951780 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 66

Conread position: 1-605
Cow position: chr12:42859857-42860466 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 1-623
Cow position: chr12:22332580-22331952 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 186

Conread position: 3-171
Cow position: chr12:26947021-26947195 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 3-443
Cow position: chr12:21207653-21207200 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 202

Conread position: 3-446
Cow position: chr12:21254697-21255149 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 233

Conread position: 3-446
Cow position: chr12:21426651-21426205 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 10

Conread position: 3-446
Cow position: chr12:26141772-26141313 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 285

Conread position: 3-446
Cow position: chr12:32653503-32653047 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-463
Cow position: chr12:37558513-37558042 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 143

Conread position: 3-505
Cow position: chr12:25101103-25101611 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 298

Conread position: 3-538
Cow position: chr12:8678164-8678698 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 435

Conread position: 3-597
Cow position: chr12:11098200-11097598 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 119

Conread position: 3-602
Cow position: chr12:1402449-1401844 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 434

Conread position: 3-603
Cow position: chr12:6406690-6407292 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 38

Conread position: 3-603
Cow position: chr12:27932987-27933593 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 393

Conread position: 3-608
Cow position: chr12:22205788-22206395 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 391

Conread position: 3-613
Cow position: chr12:20998163-20998787 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 340

Conread position: 3-649
Cow position: chr12:1868419-1867775 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 23

Conread position: 3-669
Cow position: chr12:21500076-21499405 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 21

Conread position: 4-335
Cow position: chr12:28766063-28766401 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 89

Conread position: 4-362
Cow position: chr12:14662654-14663022 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 144

Conread position: 4-447
Cow position: chr12:3360861-3360412 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 180

Conread position: 4-613
Cow position: chr12:2282504-2281878 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 246

Conread position: 5-603
Cow position: chr12:252100-252707 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 48

Conread position: 7-447
Cow position: chr12:43031429-43031875 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 302
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 75, 265

Conread position: 16-613
Cow position: chr12:21197772-21197166 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 427

Conread position: 78-249
Cow position: chr12:601173-601350 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 17

Conread position: 99-708
Cow position: chr12:2839737-2840342 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 11

Conread position: 122-677
Cow position: chr12:3631013-3630479 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 361
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 115

Conread position: 164-613
Cow position: chr12:26947469-26947905 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 299
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 172, 37

Conread position: 167-323
Cow position: chr12:42420627-42420783 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 197-446
Cow position: chr12:21883779-21883524 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 142, 50

Conread position: 314-534
Cow position: chr12:9708823-9709051 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 47, 0

Conread position: 321-613
Cow position: chr12:22121355-22121063 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 48

Conread position: 356-614
Cow position: chr12:21058374-21058637 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 165

Conread position: 360-708
Cow position: chr12:48404363-48404020 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 32

Conread position: 371-613
Cow position: chr12:32183125-32182885 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 136, 144

Conread position: 372-613
Cow position: chr12:45261238-45260993 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 135, 143

Show alignments to all cow chromosomes.