Cow genome map
| Conread name: | Ova1-OVRM10106F05 |
| Conread position: | 1-220 |
| Cow position: | chr13:56730544-56730764 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 97, 163 |
| Conread position: | 1-372 |
| Cow position: | chr13:34142919-34143302 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 1-384 |
| Cow position: | chr13:33927823-33928202 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 249 |
| Conread position: | 1-401 |
| Cow position: | chr13:34936883-34936469 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 1-507 |
| Cow position: | chr13:30140734-30140216 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 323 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 61, 49 |
| Conread position: | 1-551 |
| Cow position: | chr13:54284320-54283772 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 207 |
| Conread position: | 1-587 |
| Cow position: | chr13:30657229-30657807 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 78 |
| Conread position: | 1-596 |
| Cow position: | chr13:31832339-31831756 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 303 |
| Conread position: | 1-610 |
| Cow position: | chr13:62327845-62328448 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 28 |
| Conread position: | 1-622 |
| Cow position: | chr13:2908711-2909321 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 133 |
| Conread position: | 1-624 |
| Cow position: | chr13:2306242-2305627 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 402 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 1-624 |
| Cow position: | chr13:46732615-46733216 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 141 |
| Conread position: | 1-626 |
| Cow position: | chr13:33824990-33825626 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 392 |
| Conread position: | 1-626 |
| Cow position: | chr13:34692902-34692291 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 223 |
| Conread position: | 1-642 |
| Cow position: | chr13:34186948-34187601 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 358 |
| Conread position: | 1-710 |
| Cow position: | chr13:15080466-15081144 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 3-171 |
| Cow position: | chr13:23003778-23003949 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 166 |
| Conread position: | 3-385 |
| Cow position: | chr13:34911639-34912020 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 23 |
| Conread position: | 3-390 |
| Cow position: | chr13:2232397-2232012 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 251 |
| Conread position: | 3-405 |
| Cow position: | chr13:34868510-34868095 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 263 |
| Conread position: | 3-412 |
| Cow position: | chr13:30237908-30237494 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 10 |
| Conread position: | 3-441 |
| Cow position: | chr13:17308212-17307769 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 275 |
| Conread position: | 3-446 |
| Cow position: | chr13:4872814-4872357 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 3-446 |
| Cow position: | chr13:21840457-21840917 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 3-446 |
| Cow position: | chr13:31734344-31734793 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 38 |
| Conread position: | 3-446 |
| Cow position: | chr13:50109199-50108746 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 356 |
| Conread position: | 3-463 |
| Cow position: | chr13:2297061-2297529 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 229 |
| Conread position: | 3-530 |
| Cow position: | chr13:3654572-3655100 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 256 |
| Conread position: | 3-603 |
| Cow position: | chr13:4940824-4940213 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 439 |
| Conread position: | 3-603 |
| Cow position: | chr13:9044248-9043661 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 124 |
| Conread position: | 3-603 |
| Cow position: | chr13:15924647-15925254 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 437 |
| Conread position: | 3-603 |
| Cow position: | chr13:30302803-30302201 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 89 |
| Conread position: | 3-603 |
| Cow position: | chr13:34042627-34043233 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 124 |
| Conread position: | 3-603 |
| Cow position: | chr13:35756978-35756363 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 402 |
| Conread position: | 3-609 |
| Cow position: | chr13:32986313-32986953 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 21 |
| Conread position: | 3-613 |
| Cow position: | chr13:30244996-30245640 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 542 |
| Conread position: | 3-613 |
| Cow position: | chr13:32544678-32544071 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 158 |
| Conread position: | 3-613 |
| Cow position: | chr13:49973420-49972801 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 371 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 73, 227 |
| Conread position: | 3-616 |
| Cow position: | chr13:15520778-15521406 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 30 |
| Conread position: | 3-620 |
| Cow position: | chr13:1593416-1594045 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 354 |
| Conread position: | 3-621 |
| Cow position: | chr13:20542631-20543243 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 3-622 |
| Cow position: | chr13:3276895-3276276 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 251 |
| Conread position: | 3-629 |
| Cow position: | chr13:32738083-32738704 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 116 |
| Conread position: | 4-603 |
| Cow position: | chr13:6668387-6669013 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 4-612 |
| Cow position: | chr13:34325939-34326571 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 137 |
| Conread position: | 10-507 |
| Cow position: | chr13:4482201-4481713 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 90 |
| Conread position: | 10-629 |
| Cow position: | chr13:31612605-31613232 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 263 |
| Conread position: | 29-350 |
| Cow position: | chr13:3058281-3058614 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 43-613 |
| Cow position: | chr13:33336630-33337201 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 53 |
| Conread position: | 58-390 |
| Cow position: | chr13:13046142-13046482 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 328 |
| Conread position: | 84-446 |
| Cow position: | chr13:2389150-2389517 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 116-708 |
| Cow position: | chr13:48356943-48356352 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 122-613 |
| Cow position: | chr13:35030126-35029615 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 133 |
| Conread position: | 125-708 |
| Cow position: | chr13:34767641-34768180 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 426, 40 |
| Conread position: | 160-603 |
| Cow position: | chr13:15543034-15542595 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 364, 268 |
| Conread position: | 167-612 |
| Cow position: | chr13:53834334-53833859 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 220, 457 |
| Conread position: | 207-568 |
| Cow position: | chr13:61951713-61951353 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 132, 94 |
| Conread position: | 230-446 |
| Cow position: | chr13:676464-676246 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 230-446 |
| Cow position: | chr13:49973216-49972994 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 240-665 |
| Cow position: | chr13:33278854-33279269 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 27 |
| Conread position: | 256-708 |
| Cow position: | chr13:47859797-47859352 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 110, 96 |
| Conread position: | 304-628 |
| Cow position: | chr13:19438123-19437799 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 11 |
| Conread position: | 315-678 |
| Cow position: | chr13:11764758-11765126 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 76, 277 |
| Conread position: | 419-613 |
| Cow position: | chr13:34936176-34935977 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 445-708 |
| Cow position: | chr13:5283140-5282880 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 71, 12 |
Show alignments to all cow chromosomes.