Cow genome map


           Conread name:
           Ova1-OVRM10106F05
        

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               98, 76
               

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 33
               

               Conread position:
               1-231
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-258
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               73, 213
               

               Conread position:
               1-351
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 234
               

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 235
               

               Conread position:
               1-371
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 16
               

               Conread position:
               1-390
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 28
               

               Conread position:
               1-425
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 78
               

               Conread position:
               1-547
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 131
               

               Conread position:
               1-599
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 15
               

               Conread position:
               1-599
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 7
               

               Conread position:
               1-612
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 206
               

               Conread position:
               1-612
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 12
               

               Conread position:
               1-613
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 98
               

               Conread position:
               1-613
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 302
               

               Conread position:
               1-613
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 375
               

               Conread position:
               1-623
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 41
               

               Conread position:
               1-626
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 120
               

               Conread position:
               1-696
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 144
               

               Conread position:
               1-706
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 28
               

               Conread position:
               1-708
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 229
               

               Conread position:
               2-612
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 110
               

               Conread position:
               3-163
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               3-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               3-231
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               69, 219
               

               Conread position:
               3-256
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               71, 30
               

               Conread position:
               3-350
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 94
               

               Conread position:
               3-385
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 33
               

               Conread position:
               3-385
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-397
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 275
               

               Conread position:
               3-405
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 63
               

               Conread position:
               3-405
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 63
               

               Conread position:
               3-442
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 270
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 274
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 79
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 271
               

               Conread position:
               3-448
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 139
               

               Conread position:
               3-464
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               109, 10
               

               Conread position:
               3-595
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 432
               

               Conread position:
               3-599
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 433
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 437
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 145
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 440
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 216
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 94
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 440
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 133
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 190
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 85
               

               Conread position:
               3-604
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 429
               

               Conread position:
               3-609
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 338
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 51
               

               Conread position:
               3-657
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 264
               

               Conread position:
               3-669
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 232
               

               Conread position:
               4-559
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 115
               

               Conread position:
               4-599
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 228
               

               Conread position:
               5-316
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 111
               

               Conread position:
               8-522
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 212
               

               Conread position:
               18-384
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 95
               

               Conread position:
               24-635
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               31-613
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 278
               

               Conread position:
               46-421
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               70, 307
               

               Conread position:
               46-534
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 71
               

               Conread position:
               54-463
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               294
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               22, 208
               

               Conread position:
               80-669
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 151
               

               Conread position:
               80-708
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               96-601
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               335
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               49, 43
               

               Conread position:
               98-507
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               111-416
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               243, 39
               

               Conread position:
               113-614
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 83
               

               Conread position:
               115-412
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 127
               

               Conread position:
               115-692
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 49
               

               Conread position:
               117-413
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               130-383
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 67
               

               Conread position:
               145-410
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 132
               

               Conread position:
               160-350
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               69, 63
               

               Conread position:
               160-603
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               363, 0
               

               Conread position:
               160-613
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 98
               

               Conread position:
               161-384
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               86, 196
               

               Conread position:
               166-390
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               26, 212
               

               Conread position:
               166-566
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 34
               

               Conread position:
               169-446
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 0
               

               Conread position:
               184-689
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               331
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               246, 58
               

               Conread position:
               189-446
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               198, 76
               

               Conread position:
               207-613
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               42, 134
               

               Conread position:
               230-446
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               231-446
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               356-613
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               151, 41
               

               Conread position:
               420-678
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 11
               

               Conread position:
               421-596
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               438-677
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               73, 77
               

               Conread position:
               460-710
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               14, 31
               
Show alignments to all cow chromosomes.