Cow genome map

Conread name: Ova1-OVRM10106F05

Conread position: 1-159
Cow position: chr14:48824229-48824070 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 76

Conread position: 1-169
Cow position: chr14:1500645-1500475 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 75, 33

Conread position: 1-231
Cow position: chr14:42151938-42151698 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 97, 0

Conread position: 1-258
Cow position: chr14:12608824-12608559 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 213

Conread position: 1-351
Cow position: chr14:7830924-7831280 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 234

Conread position: 1-367
Cow position: chr14:45767622-45767247 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 235

Conread position: 1-371
Cow position: chr14:45712363-45712745 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 16

Conread position: 1-390
Cow position: chr14:45850839-45850443 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 28

Conread position: 1-425
Cow position: chr14:40170070-40170499 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 78

Conread position: 1-547
Cow position: chr14:36967870-36967336 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 131

Conread position: 1-599
Cow position: chr14:31607314-31607897 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 15

Conread position: 1-599
Cow position: chr14:35387518-35388124 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 7

Conread position: 1-612
Cow position: chr14:13272874-13272249 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 206

Conread position: 1-612
Cow position: chr14:44226021-44225399 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 12

Conread position: 1-613
Cow position: chr14:13660373-13660974 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 98

Conread position: 1-613
Cow position: chr14:44130534-44129949 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 302

Conread position: 1-613
Cow position: chr14:44855811-44856415 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 375

Conread position: 1-623
Cow position: chr14:22019014-22018385 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 41

Conread position: 1-626
Cow position: chr14:23690609-23691236 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 120

Conread position: 1-696
Cow position: chr14:44580537-44579869 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 144

Conread position: 1-706
Cow position: chr14:14309457-14310145 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 28

Conread position: 1-708
Cow position: chr14:35928791-35928085 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 229

Conread position: 2-612
Cow position: chr14:46084239-46083625 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 110

Conread position: 3-163
Cow position: chr14:23901187-23901351 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 3-169
Cow position: chr14:15276966-15277134 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 3-231
Cow position: chr14:13621998-13622236 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 69, 219

Conread position: 3-256
Cow position: chr14:33394163-33394427 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 71, 30

Conread position: 3-350
Cow position: chr14:16920075-16920427 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 94

Conread position: 3-385
Cow position: chr14:9045179-9044785 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 33

Conread position: 3-385
Cow position: chr14:23256973-23256577 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-397
Cow position: chr14:29048288-29048686 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 275

Conread position: 3-405
Cow position: chr14:27992694-27993075 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 261
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 63

Conread position: 3-405
Cow position: chr14:45080134-45079737 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 63

Conread position: 3-442
Cow position: chr14:750183-749736 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 270

Conread position: 3-446
Cow position: chr14:17491843-17492296 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 274

Conread position: 3-446
Cow position: chr14:30585331-30585781 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 79

Conread position: 3-446
Cow position: chr14:45672431-45672888 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 271

Conread position: 3-448
Cow position: chr14:30596767-30597220 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 139

Conread position: 3-464
Cow position: chr14:43553033-43552565 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 289
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 10

Conread position: 3-595
Cow position: chr14:37223516-37222915 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 432

Conread position: 3-599
Cow position: chr14:45160480-45159852 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 3-603
Cow position: chr14:5528675-5528071 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 433

Conread position: 3-603
Cow position: chr14:7471988-7471381 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 437

Conread position: 3-603
Cow position: chr14:13302644-13302034 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 145

Conread position: 3-603
Cow position: chr14:16273682-16274292 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 440

Conread position: 3-603
Cow position: chr14:17685009-17684408 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 216

Conread position: 3-603
Cow position: chr14:22032072-22032673 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 94

Conread position: 3-603
Cow position: chr14:28994241-28994853 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 440

Conread position: 3-603
Cow position: chr14:44377049-44376432 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 133

Conread position: 3-603
Cow position: chr14:48254697-48255307 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 190

Conread position: 3-603
Cow position: chr14:50110185-50109594 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 85

Conread position: 3-604
Cow position: chr14:19328655-19329262 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 429

Conread position: 3-609
Cow position: chr14:17001441-17002049 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 338

Conread position: 3-613
Cow position: chr14:11468203-11467605 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 51

Conread position: 3-657
Cow position: chr14:20782070-20781412 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 264

Conread position: 3-669
Cow position: chr14:44782641-44783323 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 232

Conread position: 4-559
Cow position: chr14:44685661-44685078 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 115

Conread position: 4-599
Cow position: chr14:45833773-45833173 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 228

Conread position: 5-316
Cow position: chr14:44422167-44421847 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 111

Conread position: 8-522
Cow position: chr14:38532686-38533215 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 212

Conread position: 18-384
Cow position: chr14:47624168-47623792 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 95

Conread position: 24-635
Cow position: chr14:41755453-41754846 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 12

Conread position: 31-613
Cow position: chr14:40339292-40338690 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 278

Conread position: 46-421
Cow position: chr14:33235568-33235187 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 235
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 307

Conread position: 46-534
Cow position: chr14:11154584-11155074 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 71

Conread position: 54-463
Cow position: chr14:45205634-45205202 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 294
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 22, 208

Conread position: 80-669
Cow position: chr14:44780382-44780983 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 151

Conread position: 80-708
Cow position: chr14:14422491-14423105 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 75

Conread position: 96-601
Cow position: chr14:34775111-34774624 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 335
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 49, 43

Conread position: 98-507
Cow position: chr14:45916913-45916488 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 282
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 140

Conread position: 111-416
Cow position: chr14:46669812-46669517 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 243, 39

Conread position: 113-614
Cow position: chr14:44675901-44675415 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 314
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 83

Conread position: 115-412
Cow position: chr14:46759883-46760180 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 197
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 127

Conread position: 115-692
Cow position: chr14:41407346-41406765 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 49

Conread position: 117-413
Cow position: chr14:5448183-5447874 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 202
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 86

Conread position: 130-383
Cow position: chr14:41085329-41085585 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 67

Conread position: 145-410
Cow position: chr14:44261630-44261895 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 132

Conread position: 160-350
Cow position: chr14:13778309-13778119 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 69, 63

Conread position: 160-603
Cow position: chr14:44551500-44551052 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 0

Conread position: 160-613
Cow position: chr14:46464236-46463791 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 98

Conread position: 161-384
Cow position: chr14:15277407-15277635 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 86, 196

Conread position: 166-390
Cow position: chr14:1500193-1499969 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 212

Conread position: 166-566
Cow position: chr14:50134349-50133946 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 34

Conread position: 169-446
Cow position: chr14:2283424-2283148 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 0

Conread position: 184-689
Cow position: chr14:38146060-38145541 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 331
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 246, 58

Conread position: 189-446
Cow position: chr14:17241651-17241396 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 198, 76

Conread position: 207-613
Cow position: chr14:36346164-36346565 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 267
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 134

Conread position: 230-446
Cow position: chr14:33394428-33394648 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 157, 0

Conread position: 231-446
Cow position: chr14:10562006-10561787 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 156, 0

Conread position: 356-613
Cow position: chr14:45304378-45304637 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 151, 41

Conread position: 420-678
Cow position: chr14:49046043-49045779 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 11

Conread position: 421-596
Cow position: chr14:42404088-42403908 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 438-677
Cow position: chr14:23530231-23530470 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 73, 77

Conread position: 460-710
Cow position: chr14:36184543-36184797 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 14, 31

Show alignments to all cow chromosomes.