Cow genome map


           Conread name:
           Ova1-OVRM10106F05
        

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 21
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               113, 63
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               98, 10
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               154, 85
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               98, 26
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 75
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 226
               

               Conread position:
               1-390
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 28
               

               Conread position:
               1-411
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 101
               

               Conread position:
               1-448
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 32
               

               Conread position:
               1-463
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 342
               

               Conread position:
               1-578
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 253
               

               Conread position:
               1-613
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 97
               

               Conread position:
               1-616
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 28
               

               Conread position:
               1-626
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 235
               

               Conread position:
               1-626
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 39
               

               Conread position:
               1-665
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               427
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               77, 23
               

               Conread position:
               1-704
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 37
               

               Conread position:
               1-708
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 217
               

               Conread position:
               1-712
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 162
               

               Conread position:
               2-706
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 48
               

               Conread position:
               3-152
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-168
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               72, 110
               

               Conread position:
               3-168
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 30
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 143
               

               Conread position:
               3-234
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               73, 233
               

               Conread position:
               3-274
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               3-352
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               3-354
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-354
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 176
               

               Conread position:
               3-369
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               73, 151
               

               Conread position:
               3-382
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 276
               

               Conread position:
               3-405
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 134
               

               Conread position:
               3-411
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 322
               

               Conread position:
               3-412
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               3-415
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 261
               

               Conread position:
               3-421
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 74
               

               Conread position:
               3-433
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               310
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               58, 213
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 261
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 113
               

               Conread position:
               3-447
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               3-448
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 114
               

               Conread position:
               3-505
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 115
               

               Conread position:
               3-507
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 116
               

               Conread position:
               3-566
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 56
               

               Conread position:
               3-597
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 13
               

               Conread position:
               3-597
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 339
               

               Conread position:
               3-599
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 322
               

               Conread position:
               3-602
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 210
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 190
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 145
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 94
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 446
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 145
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 418
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 439
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 285
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 56
               

               Conread position:
               3-620
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 156
               

               Conread position:
               3-629
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 51
               

               Conread position:
               3-629
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 37
               

               Conread position:
               3-686
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 76
               

               Conread position:
               4-383
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 194
               

               Conread position:
               5-598
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 39
               

               Conread position:
               5-602
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 416
               

               Conread position:
               8-670
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 110
               

               Conread position:
               9-371
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 241
               

               Conread position:
               19-604
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 208
               

               Conread position:
               24-446
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 64
               

               Conread position:
               40-620
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 258
               

               Conread position:
               43-609
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 50
               

               Conread position:
               50-446
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               115, 216
               

               Conread position:
               60-708
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               69-636
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               71-626
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 308
               

               Conread position:
               80-602
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 315
               

               Conread position:
               94-628
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               353
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               97-421
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 150
               

               Conread position:
               114-708
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 106
               

               Conread position:
               129-403
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               234, 11
               

               Conread position:
               145-395
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               245, 10
               

               Conread position:
               160-446
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               257, 0
               

               Conread position:
               188-603
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               339, 242
               

               Conread position:
               197-624
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 171
               

               Conread position:
               201-352
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               207-708
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 52
               

               Conread position:
               212-677
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               306
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               328, 30
               

               Conread position:
               239-585
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               127, 216
               

               Conread position:
               251-421
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 45
               

               Conread position:
               280-603
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               227, 53
               

               Conread position:
               281-602
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               85, 9
               

               Conread position:
               332-708
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               355-702
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 275
               

               Conread position:
               356-708
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 44
               

               Conread position:
               367-622
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 37
               

               Conread position:
               453-689
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 158
               

               Conread position:
               457-613
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               457-708
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               78, 196
               

               Conread position:
               513-709
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 187
               
Show alignments to all cow chromosomes.