Cow genome map


           Conread name:
           Ova1-OVRM10106F05
        

               Conread position:
               1-162
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               75, 58
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-258
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 154
               

               Conread position:
               1-384
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 246
               

               Conread position:
               1-399
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 233
               

               Conread position:
               1-616
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 49
               

               Conread position:
               1-624
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               411
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               75, 21
               

               Conread position:
               1-626
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 39
               

               Conread position:
               1-626
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 349
               

               Conread position:
               1-638
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 345
               

               Conread position:
               1-675
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 130
               

               Conread position:
               1-699
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 73
               

               Conread position:
               1-706
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 46
               

               Conread position:
               1-710
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 123
               

               Conread position:
               1-711
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 54
               

               Conread position:
               2-168
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               97, 78
               

               Conread position:
               3-168
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               73, 110
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-305
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 233
               

               Conread position:
               3-307
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               65, 84
               

               Conread position:
               3-335
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               69, 247
               

               Conread position:
               3-383
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 204
               

               Conread position:
               3-405
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 324
               

               Conread position:
               3-405
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 274
               

               Conread position:
               3-405
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-407
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 233
               

               Conread position:
               3-418
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 388
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 87
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 263
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 271
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 134
               

               Conread position:
               3-448
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 192
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 267
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               324
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-534
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 445
               

               Conread position:
               3-559
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               3-573
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 230
               

               Conread position:
               3-599
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 10
               

               Conread position:
               3-603
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 113
               

               Conread position:
               3-611
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 214
               

               Conread position:
               3-612
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 365
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 630
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 56
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 543
               

               Conread position:
               3-620
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 115
               

               Conread position:
               3-620
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 116
               

               Conread position:
               3-620
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 320
               

               Conread position:
               3-629
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 61
               

               Conread position:
               3-633
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 439
               

               Conread position:
               4-372
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               5-454
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 22
               

               Conread position:
               5-470
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 8
               

               Conread position:
               8-426
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 47
               

               Conread position:
               17-308
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 237
               

               Conread position:
               29-385
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 203
               

               Conread position:
               48-446
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               127-365
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               157-372
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               14, 7
               

               Conread position:
               159-635
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 65
               

               Conread position:
               161-390
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               161-613
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               363, 36
               

               Conread position:
               162-708
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 271
               

               Conread position:
               163-412
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               211, 61
               

               Conread position:
               177-642
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 85
               

               Conread position:
               182-463
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               235, 0
               

               Conread position:
               207-708
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               331, 58
               

               Conread position:
               216-622
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               228-383
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               232-446
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               162, 145
               

               Conread position:
               247-613
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               140, 195
               

               Conread position:
               252-415
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               304-628
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 94
               

               Conread position:
               306-709
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 31
               

               Conread position:
               359-707
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 38
               

               Conread position:
               366-708
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               397-620
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 85
               

               Conread position:
               422-709
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               10, 55
               

               Conread position:
               457-611
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 57
               

               Conread position:
               457-648
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               83, 41
               
Show alignments to all cow chromosomes.